Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 RNU7-185P-201ENST00000459215 60 ntBASIC1.49□□□□□ -2.17
R3HCC1Q9Y3T6 RNU7-95P-201ENST00000459222 64 ntBASIC1.49□□□□□ -2.17
R3HCC1Q9Y3T6 SNORD124-201ENST00000459577 104 ntBASIC1.49□□□□□ -2.17
R3HCC1Q9Y3T6 RNU7-2P-201ENST00000516096 62 ntBASIC1.49□□□□□ -2.17
R3HCC1Q9Y3T6 MIR4421-201ENST00000578133 69 ntBASIC1.49□□□□□ -2.17
R3HCC1Q9Y3T6 Y_RNA.85-201ENST00000363014 111 ntBASIC1.48□□□□□ -2.17
R3HCC1Q9Y3T6 SNORA25.8-201ENST00000364831 128 ntBASIC1.48□□□□□ -2.17
R3HCC1Q9Y3T6 SNORD115-35-201ENST00000365122 82 ntBASIC1.48□□□□□ -2.17
R3HCC1Q9Y3T6 RNU6-1321P-201ENST00000390905 107 ntBASIC1.48□□□□□ -2.17
R3HCC1Q9Y3T6 RPS26P5-201ENST00000418544 335 ntBASIC1.48□□□□□ -2.17
R3HCC1Q9Y3T6 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.48□□□□□ -2.17
R3HCC1Q9Y3T6 RPL39P34-201ENST00000477141 156 ntBASIC1.48□□□□□ -2.17
R3HCC1Q9Y3T6 RNU6-521P-201ENST00000516663 105 ntBASIC1.48□□□□□ -2.17
R3HCC1Q9Y3T6 AL157834.3-201ENST00000615543 103 ntBASIC1.48□□□□□ -2.17
R3HCC1Q9Y3T6 AL162726.3-218ENST00000636401 95 ntBASIC1.48□□□□□ -2.17
R3HCC1Q9Y3T6 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
R3HCC1Q9Y3T6 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
R3HCC1Q9Y3T6 RNU6-363P-201ENST00000362895 105 ntBASIC1.47□□□□□ -2.17
R3HCC1Q9Y3T6 RNU4-67P-201ENST00000364569 141 ntBASIC1.47□□□□□ -2.17
R3HCC1Q9Y3T6 RNU6-816P-201ENST00000390914 107 ntBASIC1.47□□□□□ -2.17
R3HCC1Q9Y3T6 RNU6-1268P-201ENST00000391214 107 ntBASIC1.47□□□□□ -2.17
R3HCC1Q9Y3T6 RNU6-1239P-201ENST00000391310 107 ntBASIC1.47□□□□□ -2.17
R3HCC1Q9Y3T6 RPS29P28-201ENST00000446439 141 ntBASIC1.47□□□□□ -2.17
R3HCC1Q9Y3T6 RPL39P25-201ENST00000449384 154 ntBASIC1.47□□□□□ -2.17
R3HCC1Q9Y3T6 Y_RNA.709-201ENST00000516952 92 ntBASIC1.47□□□□□ -2.17
R3HCC1Q9Y3T6 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
R3HCC1Q9Y3T6 RNU1-124P-201ENST00000363861 145 ntBASIC1.46□□□□□ -2.18
R3HCC1Q9Y3T6 RNU1-36P-201ENST00000365130 165 ntBASIC1.46□□□□□ -2.18
R3HCC1Q9Y3T6 Y_RNA.448-201ENST00000384185 108 ntBASIC1.46□□□□□ -2.18
R3HCC1Q9Y3T6 SNORD93-201ENST00000408813 74 ntBASIC1.46□□□□□ -2.18
R3HCC1Q9Y3T6 AP1B1P2-201ENST00000416196 106 ntBASIC1.46□□□□□ -2.18
R3HCC1Q9Y3T6 AL353813.1-201ENST00000440700 253 ntBASIC1.46□□□□□ -2.18
R3HCC1Q9Y3T6 AC108729.3-201ENST00000513484 108 ntBASIC1.46□□□□□ -2.18
R3HCC1Q9Y3T6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
R3HCC1Q9Y3T6 U8.6-201ENST00000364939 135 ntBASIC1.45□□□□□ -2.18
R3HCC1Q9Y3T6 RNY4P18-201ENST00000391107 89 ntBASIC1.45□□□□□ -2.18
R3HCC1Q9Y3T6 SNORA7.5-201ENST00000410672 110 ntBASIC1.45□□□□□ -2.18
R3HCC1Q9Y3T6 AC068339.1-201ENST00000526965 141 ntBASIC1.45□□□□□ -2.18
R3HCC1Q9Y3T6 RNU6-1107P-201ENST00000364817 104 ntBASIC1.44□□□□□ -2.18
R3HCC1Q9Y3T6 MIR605-201ENST00000385078 83 ntBASIC1.44□□□□□ -2.18
R3HCC1Q9Y3T6 RNU6-679P-201ENST00000391003 106 ntBASIC1.44□□□□□ -2.18
R3HCC1Q9Y3T6 Y_RNA.588-201ENST00000391254 102 ntBASIC1.44□□□□□ -2.18
R3HCC1Q9Y3T6 MIR1257-201ENST00000408490 117 ntBASIC1.44□□□□□ -2.18
R3HCC1Q9Y3T6 MIR4491-201ENST00000581087 68 ntBASIC1.44□□□□□ -2.18
R3HCC1Q9Y3T6 MIR4676-201ENST00000583078 72 ntBASIC1.44□□□□□ -2.18
R3HCC1Q9Y3T6 Y_RNA.309-201ENST00000365046 111 ntBASIC1.43□□□□□ -2.18
R3HCC1Q9Y3T6 Y_RNA.338-201ENST00000365320 114 ntBASIC1.43□□□□□ -2.18
R3HCC1Q9Y3T6 Y_RNA.507-201ENST00000384500 99 ntBASIC1.43□□□□□ -2.18
R3HCC1Q9Y3T6 MIR618-201ENST00000385287 98 ntBASIC1.43□□□□□ -2.18
R3HCC1Q9Y3T6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
R3HCC1Q9Y3T6 MIR1827-201ENST00000408549 66 ntBASIC1.43□□□□□ -2.18
R3HCC1Q9Y3T6 RNU1-123P-201ENST00000458950 160 ntBASIC1.43□□□□□ -2.18
R3HCC1Q9Y3T6 RNU6-412P-201ENST00000516434 106 ntBASIC1.43□□□□□ -2.18
R3HCC1Q9Y3T6 AC138749.4-201ENST00000563970 127 ntBASIC1.43□□□□□ -2.18
R3HCC1Q9Y3T6 MIR5009-201ENST00000578736 100 ntBASIC1.43□□□□□ -2.18
R3HCC1Q9Y3T6 snoU13.31-201ENST00000607291 104 ntBASIC1.43□□□□□ -2.18
R3HCC1Q9Y3T6 AL353770.2-201ENST00000620024 78 ntBASIC1.43□□□□□ -2.18
R3HCC1Q9Y3T6 Y_RNA.155-201ENST00000363632 101 ntBASIC1.42□□□□□ -2.18
R3HCC1Q9Y3T6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
R3HCC1Q9Y3T6 MIR125B2-201ENST00000385128 89 ntBASIC1.42□□□□□ -2.18
R3HCC1Q9Y3T6 MIR100-201ENST00000385259 80 ntBASIC1.42□□□□□ -2.18
R3HCC1Q9Y3T6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.42□□□□□ -2.18
R3HCC1Q9Y3T6 MIR1912-201ENST00000410389 80 ntBASIC1.42□□□□□ -2.18
R3HCC1Q9Y3T6 RNU7-48P-201ENST00000458875 63 ntBASIC1.42□□□□□ -2.18
R3HCC1Q9Y3T6 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.42□□□□□ -2.18
R3HCC1Q9Y3T6 AC133485.1-201ENST00000567176 124 ntBASIC1.42□□□□□ -2.18
R3HCC1Q9Y3T6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
R3HCC1Q9Y3T6 MIR1-1-201ENST00000362147 71 ntBASIC1.41□□□□□ -2.18
R3HCC1Q9Y3T6 Y_RNA.49-201ENST00000362714 112 ntBASIC1.41□□□□□ -2.18
R3HCC1Q9Y3T6 RNU6-409P-201ENST00000384114 104 ntBASIC1.41□□□□□ -2.18
R3HCC1Q9Y3T6 MIR942-201ENST00000401111 86 ntBASIC1.41□□□□□ -2.18
R3HCC1Q9Y3T6 MIR1285-1-201ENST00000408593 84 ntBASIC1.41□□□□□ -2.18
R3HCC1Q9Y3T6 RNU6-733P-201ENST00000410759 104 ntBASIC1.41□□□□□ -2.18
R3HCC1Q9Y3T6 RNU6-919P-201ENST00000516731 104 ntBASIC1.41□□□□□ -2.18
R3HCC1Q9Y3T6 MIR6078-201ENST00000611069 100 ntBASIC1.41□□□□□ -2.18
R3HCC1Q9Y3T6 MIR376B-201ENST00000614515 100 ntBASIC1.41□□□□□ -2.18
R3HCC1Q9Y3T6 U6.109-201ENST00000636749 87 ntBASIC1.41□□□□□ -2.18
R3HCC1Q9Y3T6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.41□□□□□ -2.18
R3HCC1Q9Y3T6 RNA5SP133-201ENST00000363368 119 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 Y_RNA.323-201ENST00000365157 109 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 Y_RNA.328-201ENST00000365208 113 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 RNU6-1014P-201ENST00000383940 103 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 MIR200A-201ENST00000384875 90 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 SNORD89-201ENST00000390981 114 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 RNU6-447P-201ENST00000410293 104 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 RNU6-1118P-201ENST00000410382 104 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 RNU6-1076P-201ENST00000410397 104 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 RNU6-355P-201ENST00000410427 104 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 RNU6-791P-201ENST00000410467 104 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 RNU6-705P-201ENST00000410601 104 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 RNU6-1100P-201ENST00000410691 104 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 RNU6-860P-201ENST00000410860 104 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 RNU4-83P-201ENST00000410863 133 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 RNU6-1217P-201ENST00000411276 104 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 RNU6-785P-201ENST00000411324 104 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 AC067940.1-201ENST00000458411 300 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 UBL5P1-201ENST00000507979 193 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 RNU6-977P-201ENST00000516411 103 ntBASIC1.4□□□□□ -2.19
R3HCC1Q9Y3T6 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 214.3 ms