Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 MIR643-201ENST00000385267 97 ntBASIC0.04□□□□□ -2.4
TM9SF3Q9HD45 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
TM9SF3Q9HD45 RNU5E-9P-201ENST00000411164 104 ntBASIC0.04□□□□□ -2.4
TM9SF3Q9HD45 AC108059.2-201ENST00000434626 151 ntBASIC0.04□□□□□ -2.4
TM9SF3Q9HD45 MTND1P19-201ENST00000511780 315 ntBASIC0.04□□□□□ -2.4
TM9SF3Q9HD45 RNU6-1232P-201ENST00000516299 86 ntBASIC0.04□□□□□ -2.4
TM9SF3Q9HD45 AC104408.1-201ENST00000605241 170 ntBASIC0.04□□□□□ -2.4
TM9SF3Q9HD45 TUG1_4.1-201ENST00000619464 181 ntBASIC0.04□□□□□ -2.4
TM9SF3Q9HD45 MIR6828-201ENST00000636181 60 ntBASIC0.04□□□□□ -2.4
TM9SF3Q9HD45 SNORD114-5-201ENST00000362928 70 ntBASIC0.03□□□□□ -2.4
TM9SF3Q9HD45 RNA5SP214-201ENST00000363378 118 ntBASIC0.03□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.422-201ENST00000384054 114 ntBASIC0.03□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.459-201ENST00000384251 102 ntBASIC0.03□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.626-201ENST00000411288 95 ntBASIC0.03□□□□□ -2.4
TM9SF3Q9HD45 RNU7-113P-201ENST00000459273 62 ntBASIC0.03□□□□□ -2.4
TM9SF3Q9HD45 AC105081.1-201ENST00000617727 106 ntBASIC0.03□□□□□ -2.4
TM9SF3Q9HD45 U6.106-201ENST00000636360 105 ntBASIC0.03□□□□□ -2.4
TM9SF3Q9HD45 Y_RNA.52-201ENST00000362760 96 ntBASIC0.02□□□□□ -2.41
TM9SF3Q9HD45 RNU6-1099P-201ENST00000363533 107 ntBASIC0.02□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.366-201ENST00000365540 102 ntBASIC0.02□□□□□ -2.41
TM9SF3Q9HD45 MIR329-2-201ENST00000385029 84 ntBASIC0.02□□□□□ -2.41
TM9SF3Q9HD45 MIR760-201ENST00000390220 80 ntBASIC0.02□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.680-201ENST00000516441 93 ntBASIC0.02□□□□□ -2.41
TM9SF3Q9HD45 RNA5SP395-201ENST00000516567 118 ntBASIC0.02□□□□□ -2.41
TM9SF3Q9HD45 SNORD67.1-201ENST00000516618 108 ntBASIC0.02□□□□□ -2.41
TM9SF3Q9HD45 RNA5SP33-201ENST00000516687 98 ntBASIC0.02□□□□□ -2.41
TM9SF3Q9HD45 RNU7-35P-201ENST00000517174 62 ntBASIC0.02□□□□□ -2.41
TM9SF3Q9HD45 AL359881.1-201ENST00000602916 267 ntBASIC0.02□□□□□ -2.41
TM9SF3Q9HD45 MIR371B-201ENST00000638082 66 ntBASIC0.02□□□□□ -2.41
TM9SF3Q9HD45 SNORA9.1-201ENST00000362412 131 ntBASIC0.01□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.49-201ENST00000362714 112 ntBASIC0.01□□□□□ -2.41
TM9SF3Q9HD45 SNORD114-9-201ENST00000364370 72 ntBASIC0.01□□□□□ -2.41
TM9SF3Q9HD45 RNU6-1082P-201ENST00000364574 107 ntBASIC0.01□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.288-201ENST00000364854 92 ntBASIC0.01□□□□□ -2.41
TM9SF3Q9HD45 MIR568-201ENST00000385036 95 ntBASIC0.01□□□□□ -2.41
TM9SF3Q9HD45 AC138749.4-201ENST00000563970 127 ntBASIC0.01□□□□□ -2.41
TM9SF3Q9HD45 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
TM9SF3Q9HD45 MIR548AE2-201ENST00000583456 67 ntBASIC0.01□□□□□ -2.41
TM9SF3Q9HD45 MIR4639-201ENST00000584938 69 ntBASIC0.01□□□□□ -2.41
TM9SF3Q9HD45 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.01□□□□□ -2.41
TM9SF3Q9HD45 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.01□□□□□ -2.41
TM9SF3Q9HD45 MIR499B-201ENST00000636498 73 ntBASIC0.01□□□□□ -2.41
TM9SF3Q9HD45 AC091304.10-201ENST00000641554 121 ntBASIC0.01□□□□□ -2.41
TM9SF3Q9HD45 SNORA42.1-201ENST00000363515 137 ntBASIC0□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.145-201ENST00000363527 102 ntBASIC0□□□□□ -2.41
TM9SF3Q9HD45 SNORA25.7-201ENST00000364375 127 ntBASIC0□□□□□ -2.41
TM9SF3Q9HD45 RNU4-70P-201ENST00000384579 139 ntBASIC0□□□□□ -2.41
TM9SF3Q9HD45 RNU6-768P-201ENST00000384683 107 ntBASIC0□□□□□ -2.41
TM9SF3Q9HD45 RNU6-127P-201ENST00000390897 107 ntBASIC0□□□□□ -2.41
TM9SF3Q9HD45 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0□□□□□ -2.41
TM9SF3Q9HD45 MIR6759-201ENST00000638110 65 ntBASIC0□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.01□□□□□ -2.41
TM9SF3Q9HD45 RNU6-508P-201ENST00000363231 103 ntBASIC-0.01□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.01□□□□□ -2.41
TM9SF3Q9HD45 RNU6-702P-201ENST00000364982 107 ntBASIC-0.01□□□□□ -2.41
TM9SF3Q9HD45 RNU6-738P-201ENST00000384531 106 ntBASIC-0.01□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.01□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.01□□□□□ -2.41
TM9SF3Q9HD45 MIR548H3-201ENST00000408771 118 ntBASIC-0.01□□□□□ -2.41
TM9SF3Q9HD45 MIR1270-201ENST00000459320 83 ntBASIC-0.01□□□□□ -2.41
TM9SF3Q9HD45 RNA5SP236-201ENST00000516169 116 ntBASIC-0.01□□□□□ -2.41
TM9SF3Q9HD45 RNU2-35P-201ENST00000516446 142 ntBASIC-0.01□□□□□ -2.41
TM9SF3Q9HD45 RNU7-137P-201ENST00000516788 62 ntBASIC-0.01□□□□□ -2.41
TM9SF3Q9HD45 RNU1-29P-201ENST00000606574 126 ntBASIC-0.01□□□□□ -2.41
TM9SF3Q9HD45 RNU4-58P-201ENST00000363192 141 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 SNORA63-201ENST00000363450 132 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.149-201ENST00000363558 117 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 RNY1P2-201ENST00000364820 117 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 RNU6-275P-201ENST00000364910 107 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 RNU6-690P-201ENST00000365242 106 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 SNORA2A-201ENST00000383885 135 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 RNU6-1126P-201ENST00000384002 107 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 AL022718.1-201ENST00000412004 84 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 MIR3128-201ENST00000581957 66 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 MIR4305-201ENST00000583252 102 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 AL360085.1-201ENST00000604713 532 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.812-201ENST00000610788 101 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.784-201ENST00000613803 101 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.787-201ENST00000616522 101 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.780-201ENST00000617336 101 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.801-201ENST00000619005 101 ntBASIC-0.02□□□□□ -2.41
TM9SF3Q9HD45 MIR411-201ENST00000362239 96 ntBASIC-0.03□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.03□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.03□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.03□□□□□ -2.41
TM9SF3Q9HD45 SNORD115-24-201ENST00000363528 82 ntBASIC-0.03□□□□□ -2.41
TM9SF3Q9HD45 RNU6-35P-201ENST00000384530 107 ntBASIC-0.03□□□□□ -2.41
TM9SF3Q9HD45 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.03□□□□□ -2.41
TM9SF3Q9HD45 MIR593-201ENST00000384856 100 ntBASIC-0.03□□□□□ -2.41
TM9SF3Q9HD45 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.03□□□□□ -2.41
TM9SF3Q9HD45 RPL39P34-201ENST00000477141 156 ntBASIC-0.03□□□□□ -2.41
TM9SF3Q9HD45 RNU6-240P-201ENST00000516098 97 ntBASIC-0.03□□□□□ -2.41
TM9SF3Q9HD45 RNU6-135P-201ENST00000516769 101 ntBASIC-0.03□□□□□ -2.41
TM9SF3Q9HD45 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-0.03□□□□□ -2.41
TM9SF3Q9HD45 MIR101-2-201ENST00000362195 79 ntBASIC-0.04□□□□□ -2.42
TM9SF3Q9HD45 SNORD114-16-201ENST00000363044 70 ntBASIC-0.04□□□□□ -2.42
TM9SF3Q9HD45 RNY1P11-201ENST00000363759 113 ntBASIC-0.04□□□□□ -2.42
TM9SF3Q9HD45 RNU6-47P-201ENST00000383866 107 ntBASIC-0.04□□□□□ -2.42
TM9SF3Q9HD45 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.04□□□□□ -2.42
TM9SF3Q9HD45 RNU6-893P-201ENST00000458841 100 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 198.6 ms