Protein–RNA interactions for Protein: Q9H6A9

PCNX3, Pecanex-like protein 3, humanhuman

Predictions only

Length 2,034 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3Q9H6A9 MIR206-201ENST00000384872 86 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 SNORD77B-201ENST00000391112 67 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 RNA5SP95-201ENST00000410319 137 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 RPL39P34-201ENST00000477141 156 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 RNU6-313P-201ENST00000516317 112 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 MIR4679-2-201ENST00000578358 77 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 MIR6516-201ENST00000630554 81 ntBASIC0.86□□□□□ -2.27
PCNX3Q9H6A9 SNORD115-19-201ENST00000363098 82 ntBASIC0.85□□□□□ -2.27
PCNX3Q9H6A9 SNORD115-18-201ENST00000363293 82 ntBASIC0.85□□□□□ -2.27
PCNX3Q9H6A9 SNORD115-17-201ENST00000364612 82 ntBASIC0.85□□□□□ -2.27
PCNX3Q9H6A9 Y_RNA.360-201ENST00000365512 102 ntBASIC0.85□□□□□ -2.27
PCNX3Q9H6A9 MIR605-201ENST00000385078 83 ntBASIC0.85□□□□□ -2.27
PCNX3Q9H6A9 RNU6-1086P-201ENST00000410930 100 ntBASIC0.85□□□□□ -2.27
PCNX3Q9H6A9 RNU7-21P-201ENST00000459430 62 ntBASIC0.85□□□□□ -2.27
PCNX3Q9H6A9 SNORA70.22-201ENST00000517160 124 ntBASIC0.85□□□□□ -2.27
PCNX3Q9H6A9 AC007012.1-201ENST00000567192 175 ntBASIC0.85□□□□□ -2.27
PCNX3Q9H6A9 AL020996.3-201ENST00000606617 222 ntBASIC0.85□□□□□ -2.27
PCNX3Q9H6A9 MIR6841-201ENST00000637129 72 ntBASIC0.85□□□□□ -2.27
PCNX3Q9H6A9 AL391516.1-201ENST00000554380 2449 ntBASIC0.85□□□□□ -2.27
PCNX3Q9H6A9 RNY1P13-201ENST00000365030 105 ntBASIC0.84□□□□□ -2.27
PCNX3Q9H6A9 Y_RNA.363-201ENST00000365529 113 ntBASIC0.84□□□□□ -2.27
PCNX3Q9H6A9 MIR7-2-201ENST00000384970 110 ntBASIC0.84□□□□□ -2.27
PCNX3Q9H6A9 MRPL35P3-201ENST00000421557 364 ntBASIC0.84□□□□□ -2.27
PCNX3Q9H6A9 RPS29P1-201ENST00000465274 159 ntBASIC0.84□□□□□ -2.27
PCNX3Q9H6A9 RNU6-1018P-201ENST00000516577 106 ntBASIC0.84□□□□□ -2.27
PCNX3Q9H6A9 RNU1-124P-201ENST00000363861 145 ntBASIC0.84□□□□□ -2.28
PCNX3Q9H6A9 Y_RNA.355-201ENST00000365462 98 ntBASIC0.84□□□□□ -2.28
PCNX3Q9H6A9 Y_RNA.540-201ENST00000384638 111 ntBASIC0.84□□□□□ -2.28
PCNX3Q9H6A9 RNU6-476P-201ENST00000384726 107 ntBASIC0.84□□□□□ -2.28
PCNX3Q9H6A9 SNORD89-201ENST00000390981 114 ntBASIC0.84□□□□□ -2.28
PCNX3Q9H6A9 AC063976.4-201ENST00000421971 163 ntBASIC0.84□□□□□ -2.28
PCNX3Q9H6A9 AC133485.1-201ENST00000567176 124 ntBASIC0.84□□□□□ -2.28
PCNX3Q9H6A9 SNORA4-201ENST00000584302 138 ntBASIC0.84□□□□□ -2.28
PCNX3Q9H6A9 RNU6-363P-201ENST00000362895 105 ntBASIC0.83□□□□□ -2.28
PCNX3Q9H6A9 RNU6-1290P-201ENST00000362957 109 ntBASIC0.83□□□□□ -2.28
PCNX3Q9H6A9 MIR532-201ENST00000385025 91 ntBASIC0.83□□□□□ -2.28
PCNX3Q9H6A9 RNU6-919P-201ENST00000516731 104 ntBASIC0.83□□□□□ -2.28
PCNX3Q9H6A9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.83□□□□□ -2.28
PCNX3Q9H6A9 AL589743.1-201ENST00000551932 2712 ntBASIC0.83□□□□□ -2.28
PCNX3Q9H6A9 SNORD115-35-201ENST00000365122 82 ntBASIC0.82□□□□□ -2.28
PCNX3Q9H6A9 MIR548A1-201ENST00000385041 97 ntBASIC0.82□□□□□ -2.28
PCNX3Q9H6A9 SNORD12C-201ENST00000386307 89 ntBASIC0.82□□□□□ -2.28
PCNX3Q9H6A9 MIR4698-201ENST00000577795 80 ntBASIC0.82□□□□□ -2.28
PCNX3Q9H6A9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
PCNX3Q9H6A9 RNU6-1107P-201ENST00000364817 104 ntBASIC0.82□□□□□ -2.28
PCNX3Q9H6A9 Y_RNA.309-201ENST00000365046 111 ntBASIC0.82□□□□□ -2.28
PCNX3Q9H6A9 Y_RNA.466-201ENST00000384294 113 ntBASIC0.82□□□□□ -2.28
PCNX3Q9H6A9 RNU6-342P-201ENST00000384521 104 ntBASIC0.82□□□□□ -2.28
PCNX3Q9H6A9 MIR548D2-201ENST00000384955 97 ntBASIC0.82□□□□□ -2.28
PCNX3Q9H6A9 MIR563-201ENST00000385080 79 ntBASIC0.82□□□□□ -2.28
PCNX3Q9H6A9 MIR548J-201ENST00000408833 112 ntBASIC0.82□□□□□ -2.28
PCNX3Q9H6A9 RNU7-185P-201ENST00000459215 60 ntBASIC0.82□□□□□ -2.28
PCNX3Q9H6A9 RNU6-977P-201ENST00000516411 103 ntBASIC0.82□□□□□ -2.28
PCNX3Q9H6A9 MIR548AE2-201ENST00000583456 67 ntBASIC0.82□□□□□ -2.28
PCNX3Q9H6A9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNU4-67P-201ENST00000364569 141 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNU6-1165P-201ENST00000410119 107 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNU6-447P-201ENST00000410293 104 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNU6-1118P-201ENST00000410382 104 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNU6-1076P-201ENST00000410397 104 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNU6-355P-201ENST00000410427 104 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNU6-791P-201ENST00000410467 104 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNU6-705P-201ENST00000410601 104 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNU6-1100P-201ENST00000410691 104 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNU6-860P-201ENST00000410860 104 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNU6-1217P-201ENST00000411276 104 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNU6-785P-201ENST00000411324 104 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 UBL5P1-201ENST00000507979 193 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNU7-6P-201ENST00000516845 62 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 Y_RNA.709-201ENST00000516952 92 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNA5SP404-201ENST00000517118 132 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNU6-1223P-201ENST00000517124 104 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 MIR151B-201ENST00000584249 96 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 U6.90-201ENST00000614007 104 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 U6.70-201ENST00000620287 104 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNU6-834P-201ENST00000362367 110 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RNU6-832P-201ENST00000363319 107 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 Y_RNA.155-201ENST00000363632 101 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 SNORD116-21-201ENST00000384507 92 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 MIR200A-201ENST00000384875 90 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 SNORD93-201ENST00000408813 74 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 MIR3973-201ENST00000579824 107 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 AC106800.4-201ENST00000614905 153 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 AC105081.1-201ENST00000617727 106 ntBASIC0.81□□□□□ -2.28
PCNX3Q9H6A9 Y_RNA.261-201ENST00000364631 102 ntBASIC0.8□□□□□ -2.28
PCNX3Q9H6A9 RNU6-934P-201ENST00000365154 107 ntBASIC0.8□□□□□ -2.28
PCNX3Q9H6A9 RNU6-880P-201ENST00000384526 107 ntBASIC0.8□□□□□ -2.28
PCNX3Q9H6A9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.8□□□□□ -2.28
PCNX3Q9H6A9 RPS26P5-201ENST00000418544 335 ntBASIC0.8□□□□□ -2.28
PCNX3Q9H6A9 RNU7-48P-201ENST00000458875 63 ntBASIC0.8□□□□□ -2.28
PCNX3Q9H6A9 RNU6-589P-201ENST00000516485 107 ntBASIC0.8□□□□□ -2.28
PCNX3Q9H6A9 MIR4714-201ENST00000580728 77 ntBASIC0.8□□□□□ -2.28
PCNX3Q9H6A9 MIR4491-201ENST00000581087 68 ntBASIC0.8□□□□□ -2.28
PCNX3Q9H6A9 MIR4804-201ENST00000581683 73 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms