Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 RNY1P13-201ENST00000365030 105 ntBASIC0.76□□□□□ -2.29
USP44Q9H0E7 Y_RNA.531-201ENST00000384589 121 ntBASIC0.76□□□□□ -2.29
USP44Q9H0E7 MIR520H-201ENST00000385126 88 ntBASIC0.76□□□□□ -2.29
USP44Q9H0E7 MIR548I1-201ENST00000408810 149 ntBASIC0.76□□□□□ -2.29
USP44Q9H0E7 AL606490.4-201ENST00000423117 127 ntBASIC0.76□□□□□ -2.29
USP44Q9H0E7 AC244098.3-201ENST00000424803 96 ntBASIC0.76□□□□□ -2.29
USP44Q9H0E7 RNU7-164P-201ENST00000459221 62 ntBASIC0.76□□□□□ -2.29
USP44Q9H0E7 RNU5E-3P-201ENST00000515913 68 ntBASIC0.76□□□□□ -2.29
USP44Q9H0E7 RNU7-200P-201ENST00000516105 62 ntBASIC0.76□□□□□ -2.29
USP44Q9H0E7 RNA5SP33-201ENST00000516687 98 ntBASIC0.76□□□□□ -2.29
USP44Q9H0E7 MIR3121-201ENST00000579680 77 ntBASIC0.76□□□□□ -2.29
USP44Q9H0E7 RNU6-949P-201ENST00000384040 107 ntBASIC0.75□□□□□ -2.29
USP44Q9H0E7 Y_RNA.420-201ENST00000384043 110 ntBASIC0.75□□□□□ -2.29
USP44Q9H0E7 SNORD93-201ENST00000408813 74 ntBASIC0.75□□□□□ -2.29
USP44Q9H0E7 RNU6-1086P-201ENST00000410930 100 ntBASIC0.75□□□□□ -2.29
USP44Q9H0E7 AC096949.1-201ENST00000412047 152 ntBASIC0.75□□□□□ -2.29
USP44Q9H0E7 COX6CP6-201ENST00000490840 228 ntBASIC0.75□□□□□ -2.29
USP44Q9H0E7 RNU7-123P-201ENST00000515911 60 ntBASIC0.75□□□□□ -2.29
USP44Q9H0E7 RNU7-35P-201ENST00000517174 62 ntBASIC0.75□□□□□ -2.29
USP44Q9H0E7 RNU7-156P-201ENST00000517214 74 ntBASIC0.75□□□□□ -2.29
USP44Q9H0E7 AP001340.1-201ENST00000624405 217 ntBASIC0.75□□□□□ -2.29
USP44Q9H0E7 Y_RNA.36-201ENST00000362602 112 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 MT-TR-201ENST00000387439 65 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 RNU6-447P-201ENST00000410293 104 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 RNU6-1118P-201ENST00000410382 104 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 RNU6-1076P-201ENST00000410397 104 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 RNU6-355P-201ENST00000410427 104 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 RNU6-791P-201ENST00000410467 104 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 RNU6-705P-201ENST00000410601 104 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 RNU6-1100P-201ENST00000410691 104 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 RNU6-860P-201ENST00000410860 104 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 RNU6-1217P-201ENST00000411276 104 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 RNU6-785P-201ENST00000411324 104 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 RNU7-102P-201ENST00000458948 62 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 RNU7-79P-201ENST00000516082 62 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 RNA5SP272-201ENST00000516095 111 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 Y_RNA.692-201ENST00000516627 105 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 AP001328.1-201ENST00000528550 176 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 AC011195.1-201ENST00000578177 177 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 MIR548AE2-201ENST00000583456 67 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 SNORD92-201ENST00000585078 85 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 AC008608.1-201ENST00000603910 127 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 U6.90-201ENST00000614007 104 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 AL137067.1-201ENST00000615933 120 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 U6.70-201ENST00000620287 104 ntBASIC0.74□□□□□ -2.29
USP44Q9H0E7 Y_RNA.298-201ENST00000364960 107 ntBASIC0.73□□□□□ -2.29
USP44Q9H0E7 SNORA32-201ENST00000384072 121 ntBASIC0.73□□□□□ -2.29
USP44Q9H0E7 RNU6-364P-201ENST00000384387 107 ntBASIC0.73□□□□□ -2.29
USP44Q9H0E7 Y_RNA.488-201ENST00000384403 102 ntBASIC0.73□□□□□ -2.29
USP44Q9H0E7 MIR573-201ENST00000384964 99 ntBASIC0.73□□□□□ -2.29
USP44Q9H0E7 RPL39P25-201ENST00000449384 154 ntBASIC0.73□□□□□ -2.29
USP44Q9H0E7 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.73□□□□□ -2.29
USP44Q9H0E7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.73□□□□□ -2.29
USP44Q9H0E7 Y_RNA.294-201ENST00000364916 102 ntBASIC0.72□□□□□ -2.29
USP44Q9H0E7 RNU6-209P-201ENST00000384118 107 ntBASIC0.72□□□□□ -2.29
USP44Q9H0E7 MIR1270-201ENST00000459320 83 ntBASIC0.72□□□□□ -2.29
USP44Q9H0E7 RNU6-426P-201ENST00000516464 97 ntBASIC0.72□□□□□ -2.29
USP44Q9H0E7 IGKV1-22-201ENST00000524313 326 ntBASIC0.72□□□□□ -2.29
USP44Q9H0E7 MIR8066-201ENST00000617280 78 ntBASIC0.72□□□□□ -2.29
USP44Q9H0E7 AL589743.1-201ENST00000551932 2712 ntBASIC0.72□□□□□ -2.29
USP44Q9H0E7 Y_RNA.114-201ENST00000363265 113 ntBASIC0.71□□□□□ -2.3
USP44Q9H0E7 Y_RNA.506-201ENST00000384494 102 ntBASIC0.71□□□□□ -2.3
USP44Q9H0E7 Y_RNA.588-201ENST00000391254 102 ntBASIC0.71□□□□□ -2.3
USP44Q9H0E7 RNU4-83P-201ENST00000410863 133 ntBASIC0.71□□□□□ -2.3
USP44Q9H0E7 RNY4P20-201ENST00000516678 93 ntBASIC0.71□□□□□ -2.3
USP44Q9H0E7 MIR4491-201ENST00000581087 68 ntBASIC0.71□□□□□ -2.3
USP44Q9H0E7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.71□□□□□ -2.3
USP44Q9H0E7 MIR6513-201ENST00000621188 64 ntBASIC0.71□□□□□ -2.3
USP44Q9H0E7 AC092628.1-201ENST00000436250 252 ntBASIC0.7□□□□□ -2.3
USP44Q9H0E7 RNU6-346P-201ENST00000516288 111 ntBASIC0.7□□□□□ -2.3
USP44Q9H0E7 AC022523.2-201ENST00000561045 150 ntBASIC0.7□□□□□ -2.3
USP44Q9H0E7 AC090897.1-201ENST00000580909 226 ntBASIC0.7□□□□□ -2.3
USP44Q9H0E7 Y_RNA.42-201ENST00000362660 108 ntBASIC0.69□□□□□ -2.3
USP44Q9H0E7 RNU6-403P-201ENST00000363163 104 ntBASIC0.69□□□□□ -2.3
USP44Q9H0E7 Y_RNA.280-201ENST00000364765 112 ntBASIC0.69□□□□□ -2.3
USP44Q9H0E7 RNY1P5-201ENST00000383890 115 ntBASIC0.69□□□□□ -2.3
USP44Q9H0E7 RNU6-1104P-201ENST00000384723 104 ntBASIC0.69□□□□□ -2.3
USP44Q9H0E7 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.69□□□□□ -2.3
USP44Q9H0E7 AC018659.1-201ENST00000551083 169 ntBASIC0.69□□□□□ -2.3
USP44Q9H0E7 MIR3612-201ENST00000579753 87 ntBASIC0.69□□□□□ -2.3
USP44Q9H0E7 Y_RNA.13-201ENST00000362403 112 ntBASIC0.68□□□□□ -2.3
USP44Q9H0E7 RNU4-69P-201ENST00000410677 143 ntBASIC0.68□□□□□ -2.3
USP44Q9H0E7 RNA5SP222-201ENST00000411039 105 ntBASIC0.68□□□□□ -2.3
USP44Q9H0E7 AC098934.3-201ENST00000430450 190 ntBASIC0.68□□□□□ -2.3
USP44Q9H0E7 SNORD67.1-201ENST00000516618 108 ntBASIC0.68□□□□□ -2.3
USP44Q9H0E7 AL359881.1-201ENST00000602916 267 ntBASIC0.68□□□□□ -2.3
USP44Q9H0E7 U7.2-201ENST00000607576 63 ntBASIC0.68□□□□□ -2.3
USP44Q9H0E7 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
USP44Q9H0E7 MIR92A1-201ENST00000385233 78 ntBASIC0.67□□□□□ -2.3
USP44Q9H0E7 SNORD100-201ENST00000408573 76 ntBASIC0.67□□□□□ -2.3
USP44Q9H0E7 RNU7-137P-201ENST00000516788 62 ntBASIC0.67□□□□□ -2.3
USP44Q9H0E7 MIR6082-201ENST00000613604 109 ntBASIC0.67□□□□□ -2.3
USP44Q9H0E7 MIR6779-201ENST00000617283 64 ntBASIC0.67□□□□□ -2.3
USP44Q9H0E7 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
USP44Q9H0E7 Y_RNA.299-201ENST00000364973 94 ntBASIC0.66□□□□□ -2.3
USP44Q9H0E7 Y_RNA.568-201ENST00000384742 113 ntBASIC0.66□□□□□ -2.3
USP44Q9H0E7 Y_RNA.617-201ENST00000410920 90 ntBASIC0.66□□□□□ -2.3
USP44Q9H0E7 MTND4LP9-201ENST00000427694 174 ntBASIC0.66□□□□□ -2.3
USP44Q9H0E7 AC002350.1-201ENST00000490759 375 ntBASIC0.66□□□□□ -2.3
USP44Q9H0E7 RN7SKP19-201ENST00000516016 252 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 208 ms