Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 SNORD37.2-201ENST00000391075 66 ntBASIC0.67□□□□□ -2.3
ZNF541Q9H0D2 RNU7-185P-201ENST00000459215 60 ntBASIC0.67□□□□□ -2.3
ZNF541Q9H0D2 RNU7-156P-201ENST00000517214 74 ntBASIC0.67□□□□□ -2.3
ZNF541Q9H0D2 Y_RNA.757-201ENST00000578934 114 ntBASIC0.67□□□□□ -2.3
ZNF541Q9H0D2 MIR3671-201ENST00000580455 88 ntBASIC0.67□□□□□ -2.3
ZNF541Q9H0D2 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.67□□□□□ -2.3
ZNF541Q9H0D2 Y_RNA.171-201ENST00000363760 102 ntBASIC0.66□□□□□ -2.3
ZNF541Q9H0D2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
ZNF541Q9H0D2 MT-TF-201ENST00000387314 71 ntBASIC0.66□□□□□ -2.3
ZNF541Q9H0D2 RNA5SP144-201ENST00000410846 116 ntBASIC0.66□□□□□ -2.3
ZNF541Q9H0D2 AL662814.1-201ENST00000617364 121 ntBASIC0.66□□□□□ -2.3
ZNF541Q9H0D2 RNU6-309P-201ENST00000364573 106 ntBASIC0.65□□□□□ -2.3
ZNF541Q9H0D2 RNU4-11P-201ENST00000365287 132 ntBASIC0.65□□□□□ -2.3
ZNF541Q9H0D2 SNORD18B-201ENST00000365659 72 ntBASIC0.65□□□□□ -2.3
ZNF541Q9H0D2 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
ZNF541Q9H0D2 RNU6-804P-201ENST00000384286 107 ntBASIC0.65□□□□□ -2.3
ZNF541Q9H0D2 RNU6-886P-201ENST00000384319 105 ntBASIC0.65□□□□□ -2.3
ZNF541Q9H0D2 MIR125B2-201ENST00000385128 89 ntBASIC0.65□□□□□ -2.3
ZNF541Q9H0D2 AC244098.3-201ENST00000424803 96 ntBASIC0.65□□□□□ -2.3
ZNF541Q9H0D2 AC108059.2-201ENST00000434626 151 ntBASIC0.65□□□□□ -2.3
ZNF541Q9H0D2 RNU7-56P-201ENST00000458744 62 ntBASIC0.65□□□□□ -2.3
ZNF541Q9H0D2 RNU7-197P-201ENST00000458836 62 ntBASIC0.65□□□□□ -2.3
ZNF541Q9H0D2 Y_RNA.651-201ENST00000459380 103 ntBASIC0.65□□□□□ -2.3
ZNF541Q9H0D2 Y_RNA.686-201ENST00000516548 134 ntBASIC0.65□□□□□ -2.3
ZNF541Q9H0D2 RNA5SP285-201ENST00000516619 119 ntBASIC0.65□□□□□ -2.3
ZNF541Q9H0D2 AC112693.2-201ENST00000556538 232 ntBASIC0.65□□□□□ -2.3
ZNF541Q9H0D2 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.65□□□□□ -2.3
ZNF541Q9H0D2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.65□□□□□ -2.31
ZNF541Q9H0D2 RNU6-151P-201ENST00000364158 107 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 Y_RNA.470-201ENST00000384307 117 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 Y_RNA.580-201ENST00000391004 95 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 Y_RNA.584-201ENST00000391090 114 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 RNU6-240P-201ENST00000516098 97 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 AC243829.6-201ENST00000612652 106 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 VTRNA1-3-201ENST00000365645 89 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 SNORA18-201ENST00000384416 132 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 AC096949.1-201ENST00000412047 152 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 MTATP6P21-201ENST00000440681 189 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 RNU2-35P-201ENST00000516446 142 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 SNORA62.5-201ENST00000516634 120 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 AC141846.1-201ENST00000568348 142 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 MIR3144-201ENST00000579460 79 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 MIR4514-201ENST00000581410 57 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 AC008608.1-201ENST00000603910 127 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 Y_RNA.778-201ENST00000620203 90 ntBASIC0.64□□□□□ -2.31
ZNF541Q9H0D2 Y_RNA.8-201ENST00000362353 102 ntBASIC0.63□□□□□ -2.31
ZNF541Q9H0D2 RNU6-403P-201ENST00000363163 104 ntBASIC0.63□□□□□ -2.31
ZNF541Q9H0D2 Y_RNA.270-201ENST00000364693 104 ntBASIC0.63□□□□□ -2.31
ZNF541Q9H0D2 RNU6-690P-201ENST00000365242 106 ntBASIC0.63□□□□□ -2.31
ZNF541Q9H0D2 RNA5SP117-201ENST00000365294 118 ntBASIC0.63□□□□□ -2.31
ZNF541Q9H0D2 Y_RNA.398-201ENST00000383952 99 ntBASIC0.63□□□□□ -2.31
ZNF541Q9H0D2 SNORD116-18-201ENST00000383961 92 ntBASIC0.63□□□□□ -2.31
ZNF541Q9H0D2 MIR573-201ENST00000384964 99 ntBASIC0.63□□□□□ -2.31
ZNF541Q9H0D2 RNA5SP63-201ENST00000391225 112 ntBASIC0.63□□□□□ -2.31
ZNF541Q9H0D2 AL512326.2-201ENST00000426359 151 ntBASIC0.63□□□□□ -2.31
ZNF541Q9H0D2 RNU7-102P-201ENST00000458948 62 ntBASIC0.63□□□□□ -2.31
ZNF541Q9H0D2 COX6CP6-201ENST00000490840 228 ntBASIC0.63□□□□□ -2.31
ZNF541Q9H0D2 AC011603.4-201ENST00000611325 277 ntBASIC0.63□□□□□ -2.31
ZNF541Q9H0D2 Y_RNA.120-201ENST00000363304 110 ntBASIC0.62□□□□□ -2.31
ZNF541Q9H0D2 RNU6-449P-201ENST00000383914 107 ntBASIC0.62□□□□□ -2.31
ZNF541Q9H0D2 U8.15-201ENST00000390947 134 ntBASIC0.62□□□□□ -2.31
ZNF541Q9H0D2 RNU6-679P-201ENST00000391003 106 ntBASIC0.62□□□□□ -2.31
ZNF541Q9H0D2 RNU6-733P-201ENST00000410759 104 ntBASIC0.62□□□□□ -2.31
ZNF541Q9H0D2 RNU4-83P-201ENST00000410863 133 ntBASIC0.62□□□□□ -2.31
ZNF541Q9H0D2 AL022718.1-201ENST00000412004 84 ntBASIC0.62□□□□□ -2.31
ZNF541Q9H0D2 Y_RNA.690-201ENST00000516603 95 ntBASIC0.62□□□□□ -2.31
ZNF541Q9H0D2 MTND5P41-201ENST00000517498 206 ntBASIC0.62□□□□□ -2.31
ZNF541Q9H0D2 MIR3612-201ENST00000579753 87 ntBASIC0.62□□□□□ -2.31
ZNF541Q9H0D2 MIR4305-201ENST00000583252 102 ntBASIC0.62□□□□□ -2.31
ZNF541Q9H0D2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
ZNF541Q9H0D2 RNY1P13-201ENST00000365030 105 ntBASIC0.61□□□□□ -2.31
ZNF541Q9H0D2 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.61□□□□□ -2.31
ZNF541Q9H0D2 RNU6-460P-201ENST00000391158 108 ntBASIC0.61□□□□□ -2.31
ZNF541Q9H0D2 AL603914.1-201ENST00000401964 204 ntBASIC0.61□□□□□ -2.31
ZNF541Q9H0D2 RNU7-113P-201ENST00000459273 62 ntBASIC0.61□□□□□ -2.31
ZNF541Q9H0D2 AC023932.2-201ENST00000603176 175 ntBASIC0.61□□□□□ -2.31
ZNF541Q9H0D2 AC098479.1-201ENST00000609225 154 ntBASIC0.61□□□□□ -2.31
ZNF541Q9H0D2 SNORD115-2-201ENST00000362842 82 ntBASIC0.6□□□□□ -2.31
ZNF541Q9H0D2 SNORD115-20-201ENST00000365099 82 ntBASIC0.6□□□□□ -2.31
ZNF541Q9H0D2 RNU6-949P-201ENST00000384040 107 ntBASIC0.6□□□□□ -2.31
ZNF541Q9H0D2 Y_RNA.555-201ENST00000384673 110 ntBASIC0.6□□□□□ -2.31
ZNF541Q9H0D2 RNU7-35P-201ENST00000517174 62 ntBASIC0.6□□□□□ -2.31
ZNF541Q9H0D2 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.6□□□□□ -2.31
ZNF541Q9H0D2 AC133485.4-201ENST00000561835 220 ntBASIC0.6□□□□□ -2.31
ZNF541Q9H0D2 AC138907.4-201ENST00000570107 226 ntBASIC0.6□□□□□ -2.31
ZNF541Q9H0D2 SNORD92-201ENST00000585078 85 ntBASIC0.6□□□□□ -2.31
ZNF541Q9H0D2 AC108081.1-201ENST00000604358 221 ntBASIC0.6□□□□□ -2.31
ZNF541Q9H0D2 AC021753.1-201ENST00000635724 168 ntBASIC0.6□□□□□ -2.31
ZNF541Q9H0D2 Y_RNA.366-201ENST00000365540 102 ntBASIC0.59□□□□□ -2.32
ZNF541Q9H0D2 SNORA72.6-201ENST00000384520 129 ntBASIC0.59□□□□□ -2.32
ZNF541Q9H0D2 Y_RNA.531-201ENST00000384589 121 ntBASIC0.59□□□□□ -2.32
ZNF541Q9H0D2 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.32
ZNF541Q9H0D2 RNU6-1086P-201ENST00000410930 100 ntBASIC0.59□□□□□ -2.32
ZNF541Q9H0D2 RNU7-79P-201ENST00000516082 62 ntBASIC0.59□□□□□ -2.32
ZNF541Q9H0D2 SNORA25.12-201ENST00000516202 82 ntBASIC0.59□□□□□ -2.32
ZNF541Q9H0D2 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.32
ZNF541Q9H0D2 RNA5SP33-201ENST00000516687 98 ntBASIC0.59□□□□□ -2.32
ZNF541Q9H0D2 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 212.6 ms