Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 MIR633-201ENST00000384821 98 ntBASIC2.61□□□□□ -1.99
COL25A1Q9BXS0 MIR29C-201ENST00000385231 88 ntBASIC2.61□□□□□ -1.99
COL25A1Q9BXS0 RN7SKP123-201ENST00000410732 291 ntBASIC2.61□□□□□ -1.99
COL25A1Q9BXS0 AC110620.1-201ENST00000416042 228 ntBASIC2.61□□□□□ -1.99
COL25A1Q9BXS0 snoU13.2-201ENST00000459201 104 ntBASIC2.61□□□□□ -1.99
COL25A1Q9BXS0 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
COL25A1Q9BXS0 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
COL25A1Q9BXS0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 SNORD56.3-201ENST00000363507 71 ntBASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 Y_RNA.207-201ENST00000364142 106 ntBASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 RNU6-1051P-201ENST00000365471 102 ntBASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 Y_RNA.371-201ENST00000365591 113 ntBASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 MIR520C-201ENST00000385005 87 ntBASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 RNA5SP274-201ENST00000410484 108 ntBASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 AC244023.1-201ENST00000426884 112 ntBASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 MIR2113-201ENST00000459007 91 ntBASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 RNU7-106P-201ENST00000459514 67 ntBASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 RNU6-56P-201ENST00000516986 93 ntBASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 RNA5SP437-201ENST00000517249 129 ntBASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 MIR3935-201ENST00000583472 104 ntBASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 MIR3675-201ENST00000583661 73 ntBASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 AC242498.1-201ENST00000604134 111 ntBASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 RMST_2.1-201ENST00000617263 136 ntBASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 MIR4251-201ENST00000635819 61 ntBASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
COL25A1Q9BXS0 RNU6-461P-201ENST00000364195 107 ntBASIC2.59□□□□□ -1.99
COL25A1Q9BXS0 RNU2-7P-201ENST00000410794 178 ntBASIC2.59□□□□□ -1.99
COL25A1Q9BXS0 MIR4709-201ENST00000577272 72 ntBASIC2.59□□□□□ -1.99
COL25A1Q9BXS0 MIR3616-201ENST00000584070 92 ntBASIC2.59□□□□□ -1.99
COL25A1Q9BXS0 MIR6845-201ENST00000613182 61 ntBASIC2.59□□□□□ -1.99
COL25A1Q9BXS0 AC022202.1-201ENST00000613515 211 ntBASIC2.59□□□□□ -1.99
COL25A1Q9BXS0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
COL25A1Q9BXS0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.59□□□□□ -2
COL25A1Q9BXS0 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.58□□□□□ -2
COL25A1Q9BXS0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.58□□□□□ -2
COL25A1Q9BXS0 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
COL25A1Q9BXS0 MIR424-201ENST00000362227 98 ntBASIC2.58□□□□□ -2
COL25A1Q9BXS0 SNORD116-24-201ENST00000384549 92 ntBASIC2.58□□□□□ -2
COL25A1Q9BXS0 MIR520A-201ENST00000384862 85 ntBASIC2.58□□□□□ -2
COL25A1Q9BXS0 RNA5SP344-201ENST00000411081 104 ntBASIC2.58□□□□□ -2
COL25A1Q9BXS0 RNU6-881P-201ENST00000516813 102 ntBASIC2.58□□□□□ -2
COL25A1Q9BXS0 SNORD115-22-201ENST00000364456 82 ntBASIC2.57□□□□□ -2
COL25A1Q9BXS0 MIR597-201ENST00000384968 97 ntBASIC2.57□□□□□ -2
COL25A1Q9BXS0 MIR563-201ENST00000385080 79 ntBASIC2.57□□□□□ -2
COL25A1Q9BXS0 AL359511.1-201ENST00000402970 211 ntBASIC2.57□□□□□ -2
COL25A1Q9BXS0 RNU6-977P-201ENST00000516411 103 ntBASIC2.57□□□□□ -2
COL25A1Q9BXS0 AL096861.1-201ENST00000610899 123 ntBASIC2.57□□□□□ -2
COL25A1Q9BXS0 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.57□□□□□ -2
COL25A1Q9BXS0 AC073476.4-201ENST00000628409 72 ntBASIC2.57□□□□□ -2
COL25A1Q9BXS0 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.57□□□□□ -2
COL25A1Q9BXS0 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
COL25A1Q9BXS0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
COL25A1Q9BXS0 SNORD21-201ENST00000383953 95 ntBASIC2.56□□□□□ -2
COL25A1Q9BXS0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.56□□□□□ -2
COL25A1Q9BXS0 MIR1276-201ENST00000408707 83 ntBASIC2.56□□□□□ -2
COL25A1Q9BXS0 Y_RNA.606-201ENST00000410579 103 ntBASIC2.56□□□□□ -2
COL25A1Q9BXS0 RNVU1-2-201ENST00000516326 135 ntBASIC2.56□□□□□ -2
COL25A1Q9BXS0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.56□□□□□ -2
COL25A1Q9BXS0 AL627230.6-201ENST00000611129 280 ntBASIC2.56□□□□□ -2
COL25A1Q9BXS0 MIR8053-201ENST00000613344 75 ntBASIC2.56□□□□□ -2
COL25A1Q9BXS0 MIR6504-201ENST00000613520 61 ntBASIC2.56□□□□□ -2
COL25A1Q9BXS0 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.56□□□□□ -2
COL25A1Q9BXS0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
COL25A1Q9BXS0 MIR588-201ENST00000384900 83 ntBASIC2.55□□□□□ -2
COL25A1Q9BXS0 RNA5SP270-201ENST00000411361 118 ntBASIC2.55□□□□□ -2
COL25A1Q9BXS0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.55□□□□□ -2
COL25A1Q9BXS0 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.55□□□□□ -2
COL25A1Q9BXS0 AC009474.2-201ENST00000451383 136 ntBASIC2.55□□□□□ -2
COL25A1Q9BXS0 snoU13.27-201ENST00000459278 104 ntBASIC2.55□□□□□ -2
COL25A1Q9BXS0 RNU7-41P-201ENST00000515917 61 ntBASIC2.55□□□□□ -2
COL25A1Q9BXS0 SCARNA20.6-201ENST00000517251 106 ntBASIC2.55□□□□□ -2
COL25A1Q9BXS0 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
COL25A1Q9BXS0 RNU6-1216P-201ENST00000362590 107 ntBASIC2.54□□□□□ -2
COL25A1Q9BXS0 RNU11-3P-201ENST00000391111 133 ntBASIC2.54□□□□□ -2
COL25A1Q9BXS0 SNORD63B-201ENST00000411005 70 ntBASIC2.54□□□□□ -2
COL25A1Q9BXS0 RNA5SP492-201ENST00000411330 114 ntBASIC2.54□□□□□ -2
COL25A1Q9BXS0 RNU6-1194P-201ENST00000516208 104 ntBASIC2.54□□□□□ -2
COL25A1Q9BXS0 SUB1P4-201ENST00000566062 339 ntBASIC2.54□□□□□ -2
COL25A1Q9BXS0 MIR6734-201ENST00000621166 68 ntBASIC2.54□□□□□ -2
COL25A1Q9BXS0 ZNF209P-201ENST00000593450 2304 ntBASIC2.54□□□□□ -2
COL25A1Q9BXS0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.54□□□□□ -2
COL25A1Q9BXS0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
COL25A1Q9BXS0 MIR30D-201ENST00000362283 70 ntBASIC2.53□□□□□ -2
COL25A1Q9BXS0 SNORD45.1-201ENST00000363181 77 ntBASIC2.53□□□□□ -2
COL25A1Q9BXS0 RNY4P3-201ENST00000365254 95 ntBASIC2.53□□□□□ -2
COL25A1Q9BXS0 U8.9-201ENST00000365667 134 ntBASIC2.53□□□□□ -2
COL25A1Q9BXS0 SNORA67.3-201ENST00000384366 140 ntBASIC2.53□□□□□ -2
COL25A1Q9BXS0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.53□□□□□ -2
COL25A1Q9BXS0 RN7SL633P-201ENST00000488974 297 ntBASIC2.53□□□□□ -2
COL25A1Q9BXS0 RNA5SP217-201ENST00000515959 91 ntBASIC2.53□□□□□ -2
COL25A1Q9BXS0 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.53□□□□□ -2
COL25A1Q9BXS0 MIR26A1-201ENST00000362205 77 ntBASIC2.52□□□□□ -2.01
COL25A1Q9BXS0 MIR1283-2-201ENST00000408621 87 ntBASIC2.52□□□□□ -2.01
COL25A1Q9BXS0 PRELID3BP2-201ENST00000605362 201 ntBASIC2.52□□□□□ -2.01
COL25A1Q9BXS0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
COL25A1Q9BXS0 SNORD113.1-201ENST00000363280 73 ntBASIC2.51□□□□□ -2.01
COL25A1Q9BXS0 RNU6-112P-201ENST00000363599 104 ntBASIC2.51□□□□□ -2.01
COL25A1Q9BXS0 SNORD56.5-201ENST00000364281 72 ntBASIC2.51□□□□□ -2.01
COL25A1Q9BXS0 UBBP3-201ENST00000445497 241 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 215 ms