Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 MIR588-201ENST00000384900 83 ntBASIC1.75□□□□□ -2.13
YIPF4Q9BSR8 SNORA40.18-201ENST00000391200 128 ntBASIC1.75□□□□□ -2.13
YIPF4Q9BSR8 AC109327.2-201ENST00000448339 378 ntBASIC1.75□□□□□ -2.13
YIPF4Q9BSR8 SNORA72.7-201ENST00000516349 94 ntBASIC1.75□□□□□ -2.13
YIPF4Q9BSR8 MIR3122-201ENST00000577243 73 ntBASIC1.75□□□□□ -2.13
YIPF4Q9BSR8 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.75□□□□□ -2.13
YIPF4Q9BSR8 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.75□□□□□ -2.13
YIPF4Q9BSR8 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.74□□□□□ -2.13
YIPF4Q9BSR8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
YIPF4Q9BSR8 Y_RNA.220-201ENST00000364244 109 ntBASIC1.74□□□□□ -2.13
YIPF4Q9BSR8 SNORD45B-201ENST00000364617 72 ntBASIC1.74□□□□□ -2.13
YIPF4Q9BSR8 Y_RNA.388-201ENST00000383919 113 ntBASIC1.74□□□□□ -2.13
YIPF4Q9BSR8 RNU6-205P-201ENST00000390858 107 ntBASIC1.74□□□□□ -2.13
YIPF4Q9BSR8 RNA5SP95-201ENST00000410319 137 ntBASIC1.74□□□□□ -2.13
YIPF4Q9BSR8 RNA5SP182-201ENST00000516064 82 ntBASIC1.74□□□□□ -2.13
YIPF4Q9BSR8 AC062037.1-201ENST00000605302 128 ntBASIC1.74□□□□□ -2.13
YIPF4Q9BSR8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
YIPF4Q9BSR8 ZNF355P-201ENST00000427301 3216 ntBASIC1.73□□□□□ -2.13
YIPF4Q9BSR8 MIR30D-201ENST00000362283 70 ntBASIC1.73□□□□□ -2.13
YIPF4Q9BSR8 RNU6-1163P-201ENST00000364516 107 ntBASIC1.73□□□□□ -2.13
YIPF4Q9BSR8 SNORA16.1-201ENST00000364597 132 ntBASIC1.73□□□□□ -2.13
YIPF4Q9BSR8 Y_RNA.558-201ENST00000384685 113 ntBASIC1.73□□□□□ -2.13
YIPF4Q9BSR8 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.73□□□□□ -2.13
YIPF4Q9BSR8 RN7SKP88-201ENST00000516847 250 ntBASIC1.73□□□□□ -2.13
YIPF4Q9BSR8 7SK.8-201ENST00000612110 250 ntBASIC1.73□□□□□ -2.13
YIPF4Q9BSR8 7SK.11-201ENST00000615477 250 ntBASIC1.73□□□□□ -2.13
YIPF4Q9BSR8 7SK.13-201ENST00000622040 250 ntBASIC1.73□□□□□ -2.13
YIPF4Q9BSR8 RNU1-17P-201ENST00000363022 152 ntBASIC1.72□□□□□ -2.13
YIPF4Q9BSR8 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.72□□□□□ -2.13
YIPF4Q9BSR8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.72□□□□□ -2.13
YIPF4Q9BSR8 MIR1302-4-201ENST00000408701 150 ntBASIC1.72□□□□□ -2.13
YIPF4Q9BSR8 RNA5SP264-201ENST00000363115 107 ntBASIC1.71□□□□□ -2.14
YIPF4Q9BSR8 SNORD38.1-201ENST00000363863 68 ntBASIC1.71□□□□□ -2.14
YIPF4Q9BSR8 RNU6-396P-201ENST00000365369 105 ntBASIC1.71□□□□□ -2.14
YIPF4Q9BSR8 RNU6-949P-201ENST00000384040 107 ntBASIC1.71□□□□□ -2.14
YIPF4Q9BSR8 RNA5SP237-201ENST00000410414 113 ntBASIC1.71□□□□□ -2.14
YIPF4Q9BSR8 RNY4P29-201ENST00000410801 97 ntBASIC1.71□□□□□ -2.14
YIPF4Q9BSR8 RNU7-48P-201ENST00000458875 63 ntBASIC1.71□□□□□ -2.14
YIPF4Q9BSR8 AL133373.1-201ENST00000497098 94 ntBASIC1.71□□□□□ -2.14
YIPF4Q9BSR8 AC026421.1-201ENST00000519101 163 ntBASIC1.71□□□□□ -2.14
YIPF4Q9BSR8 MIR4419B-201ENST00000577260 68 ntBASIC1.71□□□□□ -2.14
YIPF4Q9BSR8 AC020891.4-201ENST00000605745 93 ntBASIC1.71□□□□□ -2.14
YIPF4Q9BSR8 RNU6-865P-201ENST00000364772 107 ntBASIC1.7□□□□□ -2.14
YIPF4Q9BSR8 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
YIPF4Q9BSR8 Y_RNA.593-201ENST00000410292 98 ntBASIC1.7□□□□□ -2.14
YIPF4Q9BSR8 MIR4264-201ENST00000583520 66 ntBASIC1.7□□□□□ -2.14
YIPF4Q9BSR8 MIR103A2-201ENST00000362154 78 ntBASIC1.69□□□□□ -2.14
YIPF4Q9BSR8 Y_RNA.190-201ENST00000363964 101 ntBASIC1.69□□□□□ -2.14
YIPF4Q9BSR8 U8.15-201ENST00000390947 134 ntBASIC1.69□□□□□ -2.14
YIPF4Q9BSR8 RNU6-1165P-201ENST00000410119 107 ntBASIC1.69□□□□□ -2.14
YIPF4Q9BSR8 RNU6-1054P-201ENST00000411293 104 ntBASIC1.69□□□□□ -2.14
YIPF4Q9BSR8 RPS29P28-201ENST00000446439 141 ntBASIC1.69□□□□□ -2.14
YIPF4Q9BSR8 RPS29P11-201ENST00000496507 171 ntBASIC1.69□□□□□ -2.14
YIPF4Q9BSR8 MIR2115-201ENST00000516657 100 ntBASIC1.69□□□□□ -2.14
YIPF4Q9BSR8 MT-TN-201ENST00000387400 73 ntBASIC1.68□□□□□ -2.14
YIPF4Q9BSR8 RNU6-613P-201ENST00000410412 108 ntBASIC1.68□□□□□ -2.14
YIPF4Q9BSR8 RNU7-62P-201ENST00000458856 62 ntBASIC1.68□□□□□ -2.14
YIPF4Q9BSR8 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.68□□□□□ -2.14
YIPF4Q9BSR8 SNORA25.15-201ENST00000516487 89 ntBASIC1.68□□□□□ -2.14
YIPF4Q9BSR8 AC138749.4-201ENST00000563970 127 ntBASIC1.68□□□□□ -2.14
YIPF4Q9BSR8 AC096720.1-201ENST00000604441 183 ntBASIC1.68□□□□□ -2.14
YIPF4Q9BSR8 RNU6-86P-201ENST00000606534 107 ntBASIC1.68□□□□□ -2.14
YIPF4Q9BSR8 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
YIPF4Q9BSR8 RNY1P10-201ENST00000363268 113 ntBASIC1.67□□□□□ -2.14
YIPF4Q9BSR8 RNU6-1244P-201ENST00000363614 108 ntBASIC1.67□□□□□ -2.14
YIPF4Q9BSR8 RNU6-813P-201ENST00000384691 107 ntBASIC1.67□□□□□ -2.14
YIPF4Q9BSR8 MIR9-3-201ENST00000385084 90 ntBASIC1.67□□□□□ -2.14
YIPF4Q9BSR8 SNORA26.2-201ENST00000390922 122 ntBASIC1.67□□□□□ -2.14
YIPF4Q9BSR8 RNU6-887P-201ENST00000410660 100 ntBASIC1.67□□□□□ -2.14
YIPF4Q9BSR8 Y_RNA.705-201ENST00000516862 110 ntBASIC1.67□□□□□ -2.14
YIPF4Q9BSR8 MIR4439-201ENST00000583746 80 ntBASIC1.67□□□□□ -2.14
YIPF4Q9BSR8 AC103810.7-201ENST00000607821 91 ntBASIC1.67□□□□□ -2.14
YIPF4Q9BSR8 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.67□□□□□ -2.14
YIPF4Q9BSR8 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 MIR377-201ENST00000362145 69 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 Y_RNA.98-201ENST00000363109 102 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 Y_RNA.168-201ENST00000363740 102 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 Y_RNA.363-201ENST00000365529 113 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 MIR548G-201ENST00000408442 89 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 RNU6-447P-201ENST00000410293 104 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 RNU6-1118P-201ENST00000410382 104 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 RNU6-1076P-201ENST00000410397 104 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 RNU6-355P-201ENST00000410427 104 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 RNU6-791P-201ENST00000410467 104 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 RNU6-705P-201ENST00000410601 104 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 RNU6-1100P-201ENST00000410691 104 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 RNU6-860P-201ENST00000410860 104 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 RNU6-1217P-201ENST00000411276 104 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 RNU6-785P-201ENST00000411324 104 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 snoU13.21-201ENST00000459368 105 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 SNORA4-201ENST00000584302 138 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 AP000753.3-201ENST00000604083 169 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 U6.90-201ENST00000614007 104 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 U6.70-201ENST00000620287 104 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 AP001362.1-201ENST00000625165 124 ntBASIC1.66□□□□□ -2.14
YIPF4Q9BSR8 Y_RNA.17-201ENST00000362433 111 ntBASIC1.65□□□□□ -2.15
YIPF4Q9BSR8 Y_RNA.164-201ENST00000363709 102 ntBASIC1.65□□□□□ -2.15
YIPF4Q9BSR8 Y_RNA.173-201ENST00000363776 113 ntBASIC1.65□□□□□ -2.15
YIPF4Q9BSR8 RNU6-1134P-201ENST00000365156 101 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 183.7 ms