Protein–RNA interactions for Protein: Q9BR11

ZSWIM1, Zinc finger SWIM domain-containing protein 1, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM1Q9BR11 MIR588-201ENST00000384900 83 ntBASIC1.44□□□□□ -2.18
ZSWIM1Q9BR11 MIR577-201ENST00000385196 96 ntBASIC1.44□□□□□ -2.18
ZSWIM1Q9BR11 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.44□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-321P-201ENST00000410912 106 ntBASIC1.44□□□□□ -2.18
ZSWIM1Q9BR11 AP1B1P2-201ENST00000416196 106 ntBASIC1.44□□□□□ -2.18
ZSWIM1Q9BR11 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.44□□□□□ -2.18
ZSWIM1Q9BR11 RNU1-98P-201ENST00000458992 160 ntBASIC1.44□□□□□ -2.18
ZSWIM1Q9BR11 snoU13.18-201ENST00000459483 104 ntBASIC1.44□□□□□ -2.18
ZSWIM1Q9BR11 AC004223.1-201ENST00000479840 271 ntBASIC1.44□□□□□ -2.18
ZSWIM1Q9BR11 SNORD67.1-201ENST00000516618 108 ntBASIC1.44□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-521P-201ENST00000516663 105 ntBASIC1.44□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-158P-201ENST00000517104 100 ntBASIC1.44□□□□□ -2.18
ZSWIM1Q9BR11 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.44□□□□□ -2.18
ZSWIM1Q9BR11 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.44□□□□□ -2.18
ZSWIM1Q9BR11 ZNF209P-201ENST00000593450 2304 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-949P-201ENST00000384040 107 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 Y_RNA.544-201ENST00000384650 113 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 MIR605-201ENST00000385078 83 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 MIR758-201ENST00000390227 88 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-447P-201ENST00000410293 104 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-1118P-201ENST00000410382 104 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-1076P-201ENST00000410397 104 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 RNA5SP237-201ENST00000410414 113 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-355P-201ENST00000410427 104 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-791P-201ENST00000410467 104 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-705P-201ENST00000410601 104 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 SNORA19.1-201ENST00000410656 129 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-1100P-201ENST00000410691 104 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-860P-201ENST00000410860 104 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-1217P-201ENST00000411276 104 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-785P-201ENST00000411324 104 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 RN7SKP88-201ENST00000516847 250 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 AL359821.1-201ENST00000605519 182 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 7SK.8-201ENST00000612110 250 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 U6.90-201ENST00000614007 104 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 7SK.11-201ENST00000615477 250 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 MIR8070-201ENST00000616510 88 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 U6.70-201ENST00000620287 104 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 7SK.13-201ENST00000622040 250 ntBASIC1.43□□□□□ -2.18
ZSWIM1Q9BR11 MIR30D-201ENST00000362283 70 ntBASIC1.42□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-832P-201ENST00000363319 107 ntBASIC1.42□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-654P-201ENST00000364373 107 ntBASIC1.42□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-1201P-201ENST00000384227 107 ntBASIC1.42□□□□□ -2.18
ZSWIM1Q9BR11 MIR590-201ENST00000385008 97 ntBASIC1.42□□□□□ -2.18
ZSWIM1Q9BR11 RNU1-123P-201ENST00000458950 160 ntBASIC1.42□□□□□ -2.18
ZSWIM1Q9BR11 AC048334.1-201ENST00000477975 159 ntBASIC1.42□□□□□ -2.18
ZSWIM1Q9BR11 AP001318.4-201ENST00000616637 121 ntBASIC1.42□□□□□ -2.18
ZSWIM1Q9BR11 SEPT14P17-201ENST00000617978 177 ntBASIC1.42□□□□□ -2.18
ZSWIM1Q9BR11 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-1298P-201ENST00000362456 101 ntBASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 Y_RNA.168-201ENST00000363740 102 ntBASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 RNU4-36P-201ENST00000364294 144 ntBASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 Y_RNA.348-201ENST00000365403 103 ntBASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-1237P-201ENST00000384777 107 ntBASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 MT-TF-201ENST00000387314 71 ntBASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-1307P-201ENST00000391012 103 ntBASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 RNU6-1165P-201ENST00000410119 107 ntBASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 SNORA7.5-201ENST00000410672 110 ntBASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 RNU7-62P-201ENST00000458856 62 ntBASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 DEFB131E-201ENST00000532329 154 ntBASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 AC141557.1-201ENST00000540982 400 ntBASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 MIR4421-201ENST00000578133 69 ntBASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.41□□□□□ -2.18
ZSWIM1Q9BR11 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
ZSWIM1Q9BR11 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
ZSWIM1Q9BR11 Y_RNA.10-201ENST00000362371 110 ntBASIC1.4□□□□□ -2.19
ZSWIM1Q9BR11 Y_RNA.224-201ENST00000364308 111 ntBASIC1.4□□□□□ -2.19
ZSWIM1Q9BR11 RNU6-205P-201ENST00000390858 107 ntBASIC1.4□□□□□ -2.19
ZSWIM1Q9BR11 Y_RNA.601-201ENST00000410500 113 ntBASIC1.4□□□□□ -2.19
ZSWIM1Q9BR11 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.4□□□□□ -2.19
ZSWIM1Q9BR11 SNORA31.2-201ENST00000516019 134 ntBASIC1.4□□□□□ -2.19
ZSWIM1Q9BR11 RNU6-970P-201ENST00000516312 107 ntBASIC1.4□□□□□ -2.19
ZSWIM1Q9BR11 Y_RNA.677-201ENST00000516401 85 ntBASIC1.4□□□□□ -2.19
ZSWIM1Q9BR11 MIR3660-201ENST00000584845 100 ntBASIC1.4□□□□□ -2.19
ZSWIM1Q9BR11 AL512598.1-201ENST00000610158 273 ntBASIC1.4□□□□□ -2.19
ZSWIM1Q9BR11 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ZSWIM1Q9BR11 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
ZSWIM1Q9BR11 RNU6-1321P-201ENST00000390905 107 ntBASIC1.39□□□□□ -2.19
ZSWIM1Q9BR11 Y_RNA.694-201ENST00000516677 117 ntBASIC1.39□□□□□ -2.19
ZSWIM1Q9BR11 RNU6-1006P-201ENST00000516998 103 ntBASIC1.39□□□□□ -2.19
ZSWIM1Q9BR11 SNORA4-201ENST00000584302 138 ntBASIC1.39□□□□□ -2.19
ZSWIM1Q9BR11 uc_338.6-201ENST00000613544 171 ntBASIC1.39□□□□□ -2.19
ZSWIM1Q9BR11 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.39□□□□□ -2.19
ZSWIM1Q9BR11 RNU6-640P-201ENST00000363693 105 ntBASIC1.38□□□□□ -2.19
ZSWIM1Q9BR11 Y_RNA.363-201ENST00000365529 113 ntBASIC1.38□□□□□ -2.19
ZSWIM1Q9BR11 Y_RNA.448-201ENST00000384185 108 ntBASIC1.38□□□□□ -2.19
ZSWIM1Q9BR11 RNU6-905P-201ENST00000384434 107 ntBASIC1.38□□□□□ -2.19
ZSWIM1Q9BR11 SNORA75.2-201ENST00000391138 150 ntBASIC1.38□□□□□ -2.19
ZSWIM1Q9BR11 SNORA75.3-201ENST00000391231 150 ntBASIC1.38□□□□□ -2.19
ZSWIM1Q9BR11 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.38□□□□□ -2.19
ZSWIM1Q9BR11 AC096949.1-201ENST00000412047 152 ntBASIC1.38□□□□□ -2.19
ZSWIM1Q9BR11 SCARNA23-201ENST00000516060 130 ntBASIC1.38□□□□□ -2.19
ZSWIM1Q9BR11 AL442128.1-201ENST00000615151 90 ntBASIC1.38□□□□□ -2.19
ZSWIM1Q9BR11 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
ZSWIM1Q9BR11 Y_RNA.93-201ENST00000363066 109 ntBASIC1.37□□□□□ -2.19
ZSWIM1Q9BR11 SNORA40.6-201ENST00000391153 128 ntBASIC1.37□□□□□ -2.19
ZSWIM1Q9BR11 RNA5SP95-201ENST00000410319 137 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 235.7 ms