Protein–RNA interactions for Protein: Q99250

SCN2A, Sodium channel protein type 2 subunit alpha, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2AQ99250 Y_RNA.531-201ENST00000384589 121 ntBASIC0.27□□□□□ -2.37
SCN2AQ99250 Y_RNA.584-201ENST00000391090 114 ntBASIC0.27□□□□□ -2.37
SCN2AQ99250 AL121914.1-201ENST00000450188 156 ntBASIC0.27□□□□□ -2.37
SCN2AQ99250 SNORA68.3-201ENST00000515906 83 ntBASIC0.27□□□□□ -2.37
SCN2AQ99250 IGKV1-22-201ENST00000524313 326 ntBASIC0.27□□□□□ -2.37
SCN2AQ99250 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.27□□□□□ -2.37
SCN2AQ99250 SNORD114-10-201ENST00000363409 72 ntBASIC0.26□□□□□ -2.37
SCN2AQ99250 RNU6-1099P-201ENST00000363533 107 ntBASIC0.26□□□□□ -2.37
SCN2AQ99250 Y_RNA.182-201ENST00000363880 111 ntBASIC0.26□□□□□ -2.37
SCN2AQ99250 Y_RNA.477-201ENST00000384352 108 ntBASIC0.26□□□□□ -2.37
SCN2AQ99250 RNU6-1086P-201ENST00000410930 100 ntBASIC0.26□□□□□ -2.37
SCN2AQ99250 RNU7-45P-201ENST00000459460 63 ntBASIC0.26□□□□□ -2.37
SCN2AQ99250 SNORD67.1-201ENST00000516618 108 ntBASIC0.26□□□□□ -2.37
SCN2AQ99250 RNU6-1258P-201ENST00000516911 111 ntBASIC0.26□□□□□ -2.37
SCN2AQ99250 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.26□□□□□ -2.37
SCN2AQ99250 MIR4305-201ENST00000583252 102 ntBASIC0.26□□□□□ -2.37
SCN2AQ99250 MIR4639-201ENST00000584938 69 ntBASIC0.26□□□□□ -2.37
SCN2AQ99250 AC008608.1-201ENST00000603910 127 ntBASIC0.26□□□□□ -2.37
SCN2AQ99250 MIR4315-1-201ENST00000636800 73 ntBASIC0.26□□□□□ -2.37
SCN2AQ99250 MIR4315-2-201ENST00000640925 73 ntBASIC0.26□□□□□ -2.37
SCN2AQ99250 RNU4-84P-201ENST00000364200 139 ntBASIC0.26□□□□□ -2.37
SCN2AQ99250 SCARNA15-202ENST00000516881 127 ntBASIC0.26□□□□□ -2.37
SCN2AQ99250 AC090625.1-201ENST00000357130 210 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 Y_RNA.8-201ENST00000362353 102 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 RNU6-726P-201ENST00000364680 107 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 BX276092.1-201ENST00000427368 251 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 RNU6-765P-201ENST00000516916 99 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 RNU6-388P-201ENST00000517012 105 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 RNU6-389P-201ENST00000517048 105 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 Y_RNA.757-201ENST00000578934 114 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 MIR3612-201ENST00000579753 87 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 MIR4514-201ENST00000581410 57 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 RNU6-403P-201ENST00000363163 104 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 RNU6-379P-201ENST00000363813 104 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 Y_RNA.562-201ENST00000384695 113 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 SNORA40.8-201ENST00000411034 126 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 HAR1A.1-201ENST00000459583 118 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 Y_RNA.662-201ENST00000516028 97 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 RNU2-60P-201ENST00000517290 128 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 U6.109-201ENST00000636749 87 ntBASIC0.25□□□□□ -2.37
SCN2AQ99250 SNORD18B-201ENST00000365659 72 ntBASIC0.24□□□□□ -2.37
SCN2AQ99250 RNU6-1336P-201ENST00000383886 109 ntBASIC0.24□□□□□ -2.37
SCN2AQ99250 RNU6-1126P-201ENST00000384002 107 ntBASIC0.24□□□□□ -2.37
SCN2AQ99250 Y_RNA.556-201ENST00000384677 113 ntBASIC0.24□□□□□ -2.37
SCN2AQ99250 MIR329-2-201ENST00000385029 84 ntBASIC0.24□□□□□ -2.37
SCN2AQ99250 SNORD12C-201ENST00000386307 89 ntBASIC0.24□□□□□ -2.37
SCN2AQ99250 RNA5SP144-201ENST00000410846 116 ntBASIC0.24□□□□□ -2.37
SCN2AQ99250 AF228730.3-201ENST00000436691 102 ntBASIC0.24□□□□□ -2.37
SCN2AQ99250 MIR1270-201ENST00000459320 83 ntBASIC0.24□□□□□ -2.37
SCN2AQ99250 RNA5SP33-201ENST00000516687 98 ntBASIC0.24□□□□□ -2.37
SCN2AQ99250 AC138749.4-201ENST00000563970 127 ntBASIC0.24□□□□□ -2.37
SCN2AQ99250 AC244669.1-204ENST00000621564 178 ntBASIC0.24□□□□□ -2.37
SCN2AQ99250 Y_RNA.452-201ENST00000384202 108 ntBASIC0.23□□□□□ -2.37
SCN2AQ99250 Y_RNA.644-201ENST00000459006 113 ntBASIC0.23□□□□□ -2.37
SCN2AQ99250 Y_RNA.674-201ENST00000516362 113 ntBASIC0.23□□□□□ -2.37
SCN2AQ99250 MIR5093-201ENST00000583199 100 ntBASIC0.23□□□□□ -2.37
SCN2AQ99250 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.23□□□□□ -2.37
SCN2AQ99250 RNU6-275P-201ENST00000364910 107 ntBASIC0.23□□□□□ -2.37
SCN2AQ99250 RNU6-47P-201ENST00000383866 107 ntBASIC0.23□□□□□ -2.37
SCN2AQ99250 MIR206-201ENST00000384872 86 ntBASIC0.23□□□□□ -2.37
SCN2AQ99250 RNU6-1135P-201ENST00000411083 103 ntBASIC0.23□□□□□ -2.37
SCN2AQ99250 RNU7-79P-201ENST00000516082 62 ntBASIC0.23□□□□□ -2.37
SCN2AQ99250 RNA5SP133-201ENST00000363368 119 ntBASIC0.22□□□□□ -2.37
SCN2AQ99250 RNU6-509P-201ENST00000363519 107 ntBASIC0.22□□□□□ -2.37
SCN2AQ99250 RNU6-309P-201ENST00000364573 106 ntBASIC0.22□□□□□ -2.37
SCN2AQ99250 RNA5SP117-201ENST00000365294 118 ntBASIC0.22□□□□□ -2.37
SCN2AQ99250 MIR1912-201ENST00000410389 80 ntBASIC0.22□□□□□ -2.37
SCN2AQ99250 RNU7-123P-201ENST00000515911 60 ntBASIC0.22□□□□□ -2.37
SCN2AQ99250 RNU2-35P-201ENST00000516446 142 ntBASIC0.22□□□□□ -2.37
SCN2AQ99250 RNU6-1149P-201ENST00000516810 97 ntBASIC0.22□□□□□ -2.37
SCN2AQ99250 RNA5SP94-201ENST00000516917 108 ntBASIC0.22□□□□□ -2.37
SCN2AQ99250 AC130289.1-201ENST00000577321 73 ntBASIC0.22□□□□□ -2.37
SCN2AQ99250 AC020891.4-201ENST00000605745 93 ntBASIC0.22□□□□□ -2.37
SCN2AQ99250 MIR6082-201ENST00000613604 109 ntBASIC0.22□□□□□ -2.37
SCN2AQ99250 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.21□□□□□ -2.38
SCN2AQ99250 SNORA8.2-201ENST00000384372 139 ntBASIC0.21□□□□□ -2.38
SCN2AQ99250 U8.15-201ENST00000390947 134 ntBASIC0.21□□□□□ -2.38
SCN2AQ99250 Y_RNA.588-201ENST00000391254 102 ntBASIC0.21□□□□□ -2.38
SCN2AQ99250 AL078595.1-201ENST00000404458 226 ntBASIC0.21□□□□□ -2.38
SCN2AQ99250 RNU6-588P-201ENST00000410281 105 ntBASIC0.21□□□□□ -2.38
SCN2AQ99250 IGHVIII-67-2-201ENST00000519849 88 ntBASIC0.21□□□□□ -2.38
SCN2AQ99250 MIR5589-201ENST00000579442 60 ntBASIC0.21□□□□□ -2.38
SCN2AQ99250 MIR376A2-201ENST00000636782 80 ntBASIC0.21□□□□□ -2.38
SCN2AQ99250 MIR6841-201ENST00000637129 72 ntBASIC0.21□□□□□ -2.38
SCN2AQ99250 AC073869.9-201ENST00000641610 120 ntBASIC0.21□□□□□ -2.38
SCN2AQ99250 SNORD118-201ENST00000363593 134 ntBASIC0.21□□□□□ -2.38
SCN2AQ99250 Y_RNA.478-201ENST00000384358 107 ntBASIC0.21□□□□□ -2.38
SCN2AQ99250 AC107027.2-201ENST00000512197 115 ntBASIC0.21□□□□□ -2.38
SCN2AQ99250 AC141846.1-201ENST00000568348 142 ntBASIC0.21□□□□□ -2.38
SCN2AQ99250 RNU6-1020P-201ENST00000363684 107 ntBASIC0.2□□□□□ -2.38
SCN2AQ99250 RNU6-429P-201ENST00000384582 108 ntBASIC0.2□□□□□ -2.38
SCN2AQ99250 RNU6-239P-201ENST00000390990 99 ntBASIC0.2□□□□□ -2.38
SCN2AQ99250 RNU6-679P-201ENST00000391003 106 ntBASIC0.2□□□□□ -2.38
SCN2AQ99250 RNU6-861P-201ENST00000516745 106 ntBASIC0.2□□□□□ -2.38
SCN2AQ99250 AC138869.1-201ENST00000568623 124 ntBASIC0.2□□□□□ -2.38
SCN2AQ99250 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.2□□□□□ -2.38
SCN2AQ99250 SNORD115-2-201ENST00000362842 82 ntBASIC0.2□□□□□ -2.38
SCN2AQ99250 SNORD115-20-201ENST00000365099 82 ntBASIC0.2□□□□□ -2.38
SCN2AQ99250 Y_RNA.366-201ENST00000365540 102 ntBASIC0.2□□□□□ -2.38
SCN2AQ99250 MIR760-201ENST00000390220 80 ntBASIC0.2□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 338.3 ms