Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 Y_RNA.360-201ENST00000365512 102 ntBASIC1.43□□□□□ -2.18
HAPLN3Q96S86 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.43□□□□□ -2.18
HAPLN3Q96S86 SNORD77B-201ENST00000391112 67 ntBASIC1.43□□□□□ -2.18
HAPLN3Q96S86 SNORA7.5-201ENST00000410672 110 ntBASIC1.43□□□□□ -2.18
HAPLN3Q96S86 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.43□□□□□ -2.18
HAPLN3Q96S86 FAM71BP1-201ENST00000604431 523 ntBASIC1.43□□□□□ -2.18
HAPLN3Q96S86 AP001318.4-201ENST00000616637 121 ntBASIC1.43□□□□□ -2.18
HAPLN3Q96S86 MIR6516-201ENST00000630554 81 ntBASIC1.43□□□□□ -2.18
HAPLN3Q96S86 AL161722.3-201ENST00000605789 2983 ntBASIC1.42□□□□□ -2.18
HAPLN3Q96S86 Y_RNA.78-201ENST00000362970 110 ntBASIC1.42□□□□□ -2.18
HAPLN3Q96S86 RNA5SP264-201ENST00000363115 107 ntBASIC1.42□□□□□ -2.18
HAPLN3Q96S86 Y_RNA.118-201ENST00000363300 101 ntBASIC1.42□□□□□ -2.18
HAPLN3Q96S86 RNU6-905P-201ENST00000384434 107 ntBASIC1.42□□□□□ -2.18
HAPLN3Q96S86 Y_RNA.507-201ENST00000384500 99 ntBASIC1.42□□□□□ -2.18
HAPLN3Q96S86 MIR577-201ENST00000385196 96 ntBASIC1.42□□□□□ -2.18
HAPLN3Q96S86 RNU6-1086P-201ENST00000410930 100 ntBASIC1.42□□□□□ -2.18
HAPLN3Q96S86 SNORD67.1-201ENST00000516618 108 ntBASIC1.42□□□□□ -2.18
HAPLN3Q96S86 AC141557.1-201ENST00000540982 400 ntBASIC1.42□□□□□ -2.18
HAPLN3Q96S86 MIR7111-201ENST00000619751 72 ntBASIC1.42□□□□□ -2.18
HAPLN3Q96S86 RNU6-640P-201ENST00000363693 105 ntBASIC1.41□□□□□ -2.18
HAPLN3Q96S86 RNY1P13-201ENST00000365030 105 ntBASIC1.41□□□□□ -2.18
HAPLN3Q96S86 SNORD115-35-201ENST00000365122 82 ntBASIC1.41□□□□□ -2.18
HAPLN3Q96S86 RNU6-396P-201ENST00000365369 105 ntBASIC1.41□□□□□ -2.18
HAPLN3Q96S86 RNU6-409P-201ENST00000384114 104 ntBASIC1.41□□□□□ -2.18
HAPLN3Q96S86 RNU6-733P-201ENST00000410759 104 ntBASIC1.41□□□□□ -2.18
HAPLN3Q96S86 snoU13.2-201ENST00000459201 104 ntBASIC1.41□□□□□ -2.18
HAPLN3Q96S86 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.41□□□□□ -2.18
HAPLN3Q96S86 MIR6078-201ENST00000611069 100 ntBASIC1.41□□□□□ -2.18
HAPLN3Q96S86 uc_338.6-201ENST00000613544 171 ntBASIC1.41□□□□□ -2.18
HAPLN3Q96S86 MIR6740-201ENST00000618268 113 ntBASIC1.41□□□□□ -2.18
HAPLN3Q96S86 RNU6-654P-201ENST00000364373 107 ntBASIC1.4□□□□□ -2.19
HAPLN3Q96S86 RNU6-1113P-201ENST00000384348 107 ntBASIC1.4□□□□□ -2.19
HAPLN3Q96S86 MIR206-201ENST00000384872 86 ntBASIC1.4□□□□□ -2.19
HAPLN3Q96S86 MIR588-201ENST00000384900 83 ntBASIC1.4□□□□□ -2.19
HAPLN3Q96S86 MIR563-201ENST00000385080 79 ntBASIC1.4□□□□□ -2.19
HAPLN3Q96S86 RNU6-955P-201ENST00000410497 104 ntBASIC1.4□□□□□ -2.19
HAPLN3Q96S86 UBL5P1-201ENST00000507979 193 ntBASIC1.4□□□□□ -2.19
HAPLN3Q96S86 RNU7-2P-201ENST00000516096 62 ntBASIC1.4□□□□□ -2.19
HAPLN3Q96S86 RNU11-2P-201ENST00000516898 142 ntBASIC1.4□□□□□ -2.19
HAPLN3Q96S86 RNA5SP170-201ENST00000517150 101 ntBASIC1.4□□□□□ -2.19
HAPLN3Q96S86 AC141846.1-201ENST00000568348 142 ntBASIC1.4□□□□□ -2.19
HAPLN3Q96S86 MIR6504-201ENST00000613520 61 ntBASIC1.4□□□□□ -2.19
HAPLN3Q96S86 AL353770.2-201ENST00000620024 78 ntBASIC1.4□□□□□ -2.19
HAPLN3Q96S86 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.39□□□□□ -2.19
HAPLN3Q96S86 RNY3P2-201ENST00000362918 102 ntBASIC1.39□□□□□ -2.19
HAPLN3Q96S86 RNU6-832P-201ENST00000363319 107 ntBASIC1.39□□□□□ -2.19
HAPLN3Q96S86 Y_RNA.224-201ENST00000364308 111 ntBASIC1.39□□□□□ -2.19
HAPLN3Q96S86 RNU6-205P-201ENST00000390858 107 ntBASIC1.39□□□□□ -2.19
HAPLN3Q96S86 RNA5SP95-201ENST00000410319 137 ntBASIC1.39□□□□□ -2.19
HAPLN3Q96S86 Y_RNA.677-201ENST00000516401 85 ntBASIC1.39□□□□□ -2.19
HAPLN3Q96S86 RNU7-137P-201ENST00000516788 62 ntBASIC1.39□□□□□ -2.19
HAPLN3Q96S86 DEFB131E-201ENST00000532329 154 ntBASIC1.39□□□□□ -2.19
HAPLN3Q96S86 MIR4694-201ENST00000578534 80 ntBASIC1.39□□□□□ -2.19
HAPLN3Q96S86 AL662814.1-201ENST00000617364 121 ntBASIC1.39□□□□□ -2.19
HAPLN3Q96S86 AC105081.1-201ENST00000617727 106 ntBASIC1.39□□□□□ -2.19
HAPLN3Q96S86 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
HAPLN3Q96S86 MIR103A2-201ENST00000362154 78 ntBASIC1.38□□□□□ -2.19
HAPLN3Q96S86 Y_RNA.355-201ENST00000365462 98 ntBASIC1.38□□□□□ -2.19
HAPLN3Q96S86 MIR758-201ENST00000390227 88 ntBASIC1.38□□□□□ -2.19
HAPLN3Q96S86 snoU13.18-201ENST00000459483 104 ntBASIC1.38□□□□□ -2.19
HAPLN3Q96S86 AC048334.1-201ENST00000477975 159 ntBASIC1.38□□□□□ -2.19
HAPLN3Q96S86 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.38□□□□□ -2.19
HAPLN3Q96S86 MIR30D-201ENST00000362283 70 ntBASIC1.37□□□□□ -2.19
HAPLN3Q96S86 Y_RNA.247-201ENST00000364500 92 ntBASIC1.37□□□□□ -2.19
HAPLN3Q96S86 Y_RNA.363-201ENST00000365529 113 ntBASIC1.37□□□□□ -2.19
HAPLN3Q96S86 RNU6-1201P-201ENST00000384227 107 ntBASIC1.37□□□□□ -2.19
HAPLN3Q96S86 MT-TN-201ENST00000387400 73 ntBASIC1.37□□□□□ -2.19
HAPLN3Q96S86 RNU6-1321P-201ENST00000390905 107 ntBASIC1.37□□□□□ -2.19
HAPLN3Q96S86 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.37□□□□□ -2.19
HAPLN3Q96S86 RNU1-123P-201ENST00000458950 160 ntBASIC1.37□□□□□ -2.19
HAPLN3Q96S86 RNU6-1018P-201ENST00000516577 106 ntBASIC1.37□□□□□ -2.19
HAPLN3Q96S86 MIR2115-201ENST00000516657 100 ntBASIC1.37□□□□□ -2.19
HAPLN3Q96S86 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.37□□□□□ -2.19
HAPLN3Q96S86 RNU6-1313P-201ENST00000362622 102 ntBASIC1.36□□□□□ -2.19
HAPLN3Q96S86 SNORD114-10-201ENST00000363409 72 ntBASIC1.36□□□□□ -2.19
HAPLN3Q96S86 MIR34C-201ENST00000384831 77 ntBASIC1.36□□□□□ -2.19
HAPLN3Q96S86 MIR1276-201ENST00000408707 83 ntBASIC1.36□□□□□ -2.19
HAPLN3Q96S86 RNU6-613P-201ENST00000410412 108 ntBASIC1.36□□□□□ -2.19
HAPLN3Q96S86 SNORA31.2-201ENST00000516019 134 ntBASIC1.36□□□□□ -2.19
HAPLN3Q96S86 RNU6-1006P-201ENST00000516998 103 ntBASIC1.36□□□□□ -2.19
HAPLN3Q96S86 MIR4264-201ENST00000583520 66 ntBASIC1.36□□□□□ -2.19
HAPLN3Q96S86 MIR548Z-201ENST00000584743 97 ntBASIC1.36□□□□□ -2.19
HAPLN3Q96S86 Y_RNA.818-201ENST00000618813 71 ntBASIC1.36□□□□□ -2.19
HAPLN3Q96S86 Y_RNA.191-201ENST00000363972 113 ntBASIC1.35□□□□□ -2.19
HAPLN3Q96S86 RNU4-36P-201ENST00000364294 144 ntBASIC1.35□□□□□ -2.19
HAPLN3Q96S86 RNU6-580P-201ENST00000365159 107 ntBASIC1.35□□□□□ -2.19
HAPLN3Q96S86 Y_RNA.448-201ENST00000384185 108 ntBASIC1.35□□□□□ -2.19
HAPLN3Q96S86 Y_RNA.466-201ENST00000384294 113 ntBASIC1.35□□□□□ -2.19
HAPLN3Q96S86 Y_RNA.544-201ENST00000384650 113 ntBASIC1.35□□□□□ -2.19
HAPLN3Q96S86 RNA5SP237-201ENST00000410414 113 ntBASIC1.35□□□□□ -2.19
HAPLN3Q96S86 Y_RNA.601-201ENST00000410500 113 ntBASIC1.35□□□□□ -2.19
HAPLN3Q96S86 AC096949.1-201ENST00000412047 152 ntBASIC1.35□□□□□ -2.19
HAPLN3Q96S86 SCARNA23-201ENST00000516060 130 ntBASIC1.35□□□□□ -2.19
HAPLN3Q96S86 MIR5582-201ENST00000579697 68 ntBASIC1.35□□□□□ -2.19
HAPLN3Q96S86 MIR3660-201ENST00000584845 100 ntBASIC1.35□□□□□ -2.19
HAPLN3Q96S86 MIR376B-201ENST00000614515 100 ntBASIC1.35□□□□□ -2.19
HAPLN3Q96S86 AC012531.4-201ENST00000616509 177 ntBASIC1.35□□□□□ -2.19
HAPLN3Q96S86 AL512310.12-203ENST00000640543 90 ntBASIC1.35□□□□□ -2.19
HAPLN3Q96S86 AC091304.10-201ENST00000641554 121 ntBASIC1.35□□□□□ -2.19
HAPLN3Q96S86 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms