Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 RNU6-310P-201ENST00000384655 107 ntBASIC-1.52□□□□□ -2.65
AP1S3Q96PC3 MIR206-201ENST00000384872 86 ntBASIC-1.52□□□□□ -2.65
AP1S3Q96PC3 SEPT14P8-201ENST00000508026 178 ntBASIC-1.52□□□□□ -2.65
AP1S3Q96PC3 SERF1AP1-201ENST00000514575 187 ntBASIC-1.52□□□□□ -2.65
AP1S3Q96PC3 Y_RNA.715-201ENST00000517082 110 ntBASIC-1.52□□□□□ -2.65
AP1S3Q96PC3 MIR3115-201ENST00000577915 68 ntBASIC-1.52□□□□□ -2.65
AP1S3Q96PC3 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.53□□□□□ -2.65
AP1S3Q96PC3 RNA5SP192-201ENST00000364404 120 ntBASIC-1.53□□□□□ -2.65
AP1S3Q96PC3 RNU6-890P-201ENST00000384121 107 ntBASIC-1.53□□□□□ -2.65
AP1S3Q96PC3 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.53□□□□□ -2.65
AP1S3Q96PC3 MIR587-201ENST00000384845 96 ntBASIC-1.53□□□□□ -2.65
AP1S3Q96PC3 MIR516A2-201ENST00000384888 90 ntBASIC-1.53□□□□□ -2.65
AP1S3Q96PC3 MIR516A1-201ENST00000385033 90 ntBASIC-1.53□□□□□ -2.65
AP1S3Q96PC3 AL161932.1-201ENST00000437408 146 ntBASIC-1.53□□□□□ -2.65
AP1S3Q96PC3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.53□□□□□ -2.65
AP1S3Q96PC3 AL365205.2-201ENST00000594586 68 ntBASIC-1.53□□□□□ -2.65
AP1S3Q96PC3 SNORD113-5-201ENST00000607261 78 ntBASIC-1.53□□□□□ -2.65
AP1S3Q96PC3 AC048344.4-201ENST00000619744 527 ntBASIC-1.53□□□□□ -2.65
AP1S3Q96PC3 RNU6-845P-201ENST00000362578 103 ntBASIC-1.54□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.35-201ENST00000362601 101 ntBASIC-1.54□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.127-201ENST00000363386 109 ntBASIC-1.54□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.54□□□□□ -2.66
AP1S3Q96PC3 RNU6-1163P-201ENST00000364516 107 ntBASIC-1.54□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.294-201ENST00000364916 102 ntBASIC-1.54□□□□□ -2.66
AP1S3Q96PC3 RNU6-102P-201ENST00000384485 104 ntBASIC-1.54□□□□□ -2.66
AP1S3Q96PC3 MIR548E-201ENST00000408287 88 ntBASIC-1.54□□□□□ -2.66
AP1S3Q96PC3 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.54□□□□□ -2.66
AP1S3Q96PC3 RNY1P9-201ENST00000532431 109 ntBASIC-1.54□□□□□ -2.66
AP1S3Q96PC3 MIR3165-201ENST00000579874 75 ntBASIC-1.54□□□□□ -2.66
AP1S3Q96PC3 MIR3611-201ENST00000584484 83 ntBASIC-1.54□□□□□ -2.66
AP1S3Q96PC3 VN1R91P-201ENST00000594377 169 ntBASIC-1.54□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.207-201ENST00000364142 106 ntBASIC-1.55□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.55□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.447-201ENST00000384184 113 ntBASIC-1.55□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.55□□□□□ -2.66
AP1S3Q96PC3 AC109635.3-201ENST00000529536 185 ntBASIC-1.55□□□□□ -2.66
AP1S3Q96PC3 MIR5688-201ENST00000580619 83 ntBASIC-1.55□□□□□ -2.66
AP1S3Q96PC3 AC006006.1-201ENST00000603082 144 ntBASIC-1.55□□□□□ -2.66
AP1S3Q96PC3 DLEU2_2.2-201ENST00000615474 90 ntBASIC-1.55□□□□□ -2.66
AP1S3Q96PC3 U6.100-201ENST00000636230 99 ntBASIC-1.55□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.56□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.152-201ENST00000363578 100 ntBASIC-1.56□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.439-201ENST00000384119 94 ntBASIC-1.56□□□□□ -2.66
AP1S3Q96PC3 RNY1P6-201ENST00000384193 109 ntBASIC-1.56□□□□□ -2.66
AP1S3Q96PC3 RNU6-1042P-201ENST00000384204 107 ntBASIC-1.56□□□□□ -2.66
AP1S3Q96PC3 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-1.56□□□□□ -2.66
AP1S3Q96PC3 RNU6-130P-201ENST00000411112 103 ntBASIC-1.56□□□□□ -2.66
AP1S3Q96PC3 RNU6-592P-201ENST00000411333 103 ntBASIC-1.56□□□□□ -2.66
AP1S3Q96PC3 SNORD18.2-201ENST00000459604 70 ntBASIC-1.56□□□□□ -2.66
AP1S3Q96PC3 RNU6-453P-201ENST00000516819 85 ntBASIC-1.56□□□□□ -2.66
AP1S3Q96PC3 AC084781.2-201ENST00000615568 161 ntBASIC-1.56□□□□□ -2.66
AP1S3Q96PC3 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.57□□□□□ -2.66
AP1S3Q96PC3 HSPE1P25-201ENST00000455484 251 ntBASIC-1.57□□□□□ -2.66
AP1S3Q96PC3 RNU6-561P-201ENST00000516222 102 ntBASIC-1.57□□□□□ -2.66
AP1S3Q96PC3 RNU2-35P-201ENST00000516446 142 ntBASIC-1.57□□□□□ -2.66
AP1S3Q96PC3 RNU6-850P-201ENST00000516934 103 ntBASIC-1.57□□□□□ -2.66
AP1S3Q96PC3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.57□□□□□ -2.66
AP1S3Q96PC3 AC009779.6-201ENST00000603972 165 ntBASIC-1.57□□□□□ -2.66
AP1S3Q96PC3 AP001362.1-201ENST00000625165 124 ntBASIC-1.57□□□□□ -2.66
AP1S3Q96PC3 snoU18.1-201ENST00000629629 71 ntBASIC-1.57□□□□□ -2.66
AP1S3Q96PC3 MIR4272-201ENST00000635924 64 ntBASIC-1.57□□□□□ -2.66
AP1S3Q96PC3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.57□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.58□□□□□ -2.66
AP1S3Q96PC3 SNORD114-17-201ENST00000364699 75 ntBASIC-1.58□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.303-201ENST00000364998 94 ntBASIC-1.58□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.342-201ENST00000365352 113 ntBASIC-1.58□□□□□ -2.66
AP1S3Q96PC3 RNU6-662P-201ENST00000384253 104 ntBASIC-1.58□□□□□ -2.66
AP1S3Q96PC3 MIR559-201ENST00000385188 96 ntBASIC-1.58□□□□□ -2.66
AP1S3Q96PC3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-1.58□□□□□ -2.66
AP1S3Q96PC3 RNU6-1188P-201ENST00000363795 107 ntBASIC-1.59□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.59□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.328-201ENST00000365208 113 ntBASIC-1.59□□□□□ -2.66
AP1S3Q96PC3 Y_RNA.402-201ENST00000383972 102 ntBASIC-1.59□□□□□ -2.66
AP1S3Q96PC3 AL606845.1-201ENST00000404881 255 ntBASIC-1.59□□□□□ -2.66
AP1S3Q96PC3 RNU6-762P-201ENST00000517107 102 ntBASIC-1.59□□□□□ -2.66
AP1S3Q96PC3 snoU83B.1-201ENST00000517136 88 ntBASIC-1.59□□□□□ -2.66
AP1S3Q96PC3 AL442663.2-201ENST00000554385 511 ntBASIC-1.59□□□□□ -2.66
AP1S3Q96PC3 AC145350.1-201ENST00000567426 208 ntBASIC-1.59□□□□□ -2.66
AP1S3Q96PC3 MIR376B-201ENST00000614515 100 ntBASIC-1.59□□□□□ -2.66
AP1S3Q96PC3 AC087741.2-201ENST00000619415 172 ntBASIC-1.59□□□□□ -2.66
AP1S3Q96PC3 TRDV1-202ENST00000621643 102 ntBASIC-1.59□□□□□ -2.66
AP1S3Q96PC3 RNY4P3-201ENST00000365254 95 ntBASIC-1.6□□□□□ -2.67
AP1S3Q96PC3 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.6□□□□□ -2.67
AP1S3Q96PC3 Y_RNA.639-201ENST00000458981 102 ntBASIC-1.6□□□□□ -2.67
AP1S3Q96PC3 MTND4P17-201ENST00000470444 350 ntBASIC-1.6□□□□□ -2.67
AP1S3Q96PC3 RNU6-415P-201ENST00000516252 97 ntBASIC-1.6□□□□□ -2.67
AP1S3Q96PC3 MIR548O2-201ENST00000616090 70 ntBASIC-1.6□□□□□ -2.67
AP1S3Q96PC3 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.61□□□□□ -2.67
AP1S3Q96PC3 SNORD113-8-201ENST00000363497 74 ntBASIC-1.61□□□□□ -2.67
AP1S3Q96PC3 RNY4P14-201ENST00000363656 96 ntBASIC-1.61□□□□□ -2.67
AP1S3Q96PC3 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.61□□□□□ -2.67
AP1S3Q96PC3 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.61□□□□□ -2.67
AP1S3Q96PC3 Y_RNA.569-201ENST00000384749 103 ntBASIC-1.61□□□□□ -2.67
AP1S3Q96PC3 MIR124-2-201ENST00000385081 109 ntBASIC-1.61□□□□□ -2.67
AP1S3Q96PC3 RNU6-510P-201ENST00000391239 108 ntBASIC-1.61□□□□□ -2.67
AP1S3Q96PC3 RNU6-1046P-201ENST00000516538 107 ntBASIC-1.61□□□□□ -2.67
AP1S3Q96PC3 RNU6-699P-201ENST00000517081 110 ntBASIC-1.61□□□□□ -2.67
AP1S3Q96PC3 RNU6-706P-201ENST00000517229 104 ntBASIC-1.61□□□□□ -2.67
AP1S3Q96PC3 RNU2-4P-201ENST00000606190 192 ntBASIC-1.61□□□□□ -2.67
AP1S3Q96PC3 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms