Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM47Q96LD4 ZNF209P-201ENST00000593450 2304 ntBASIC2.85□□□□□ -1.95
TRIM47Q96LD4 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.85□□□□□ -1.95
TRIM47Q96LD4 Y_RNA.119-201ENST00000363301 96 ntBASIC2.85□□□□□ -1.95
TRIM47Q96LD4 RNU6-957P-201ENST00000363652 99 ntBASIC2.85□□□□□ -1.95
TRIM47Q96LD4 RNU1-109P-201ENST00000383960 147 ntBASIC2.85□□□□□ -1.95
TRIM47Q96LD4 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
TRIM47Q96LD4 HMGN2P39-201ENST00000398005 273 ntBASIC2.85□□□□□ -1.95
TRIM47Q96LD4 AC245517.4-201ENST00000448601 281 ntBASIC2.85□□□□□ -1.95
TRIM47Q96LD4 MIR548AO-201ENST00000579992 96 ntBASIC2.85□□□□□ -1.95
TRIM47Q96LD4 AC069503.3-201ENST00000618674 145 ntBASIC2.85□□□□□ -1.95
TRIM47Q96LD4 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.85□□□□□ -1.95
TRIM47Q96LD4 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.95
TRIM47Q96LD4 RNU1-91P-201ENST00000364746 163 ntBASIC2.84□□□□□ -1.95
TRIM47Q96LD4 DEFA7P-201ENST00000382676 285 ntBASIC2.84□□□□□ -1.95
TRIM47Q96LD4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.84□□□□□ -1.95
TRIM47Q96LD4 AC104389.3-201ENST00000445629 235 ntBASIC2.84□□□□□ -1.95
TRIM47Q96LD4 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.84□□□□□ -1.95
TRIM47Q96LD4 MIR5092-201ENST00000583139 88 ntBASIC2.84□□□□□ -1.95
TRIM47Q96LD4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.84□□□□□ -1.96
TRIM47Q96LD4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
TRIM47Q96LD4 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
TRIM47Q96LD4 SNORD113.1-201ENST00000363280 73 ntBASIC2.83□□□□□ -1.96
TRIM47Q96LD4 MIR3670-2-201ENST00000582974 65 ntBASIC2.83□□□□□ -1.96
TRIM47Q96LD4 MIR3670-1-201ENST00000584160 65 ntBASIC2.83□□□□□ -1.96
TRIM47Q96LD4 MIR3670-3-201ENST00000584855 65 ntBASIC2.83□□□□□ -1.96
TRIM47Q96LD4 AC005786.1-201ENST00000588553 154 ntBASIC2.83□□□□□ -1.96
TRIM47Q96LD4 AC046143.2-201ENST00000609789 160 ntBASIC2.83□□□□□ -1.96
TRIM47Q96LD4 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.83□□□□□ -1.96
TRIM47Q96LD4 MIR3670-4-201ENST00000612260 65 ntBASIC2.83□□□□□ -1.96
TRIM47Q96LD4 AL109933.3-201ENST00000619095 188 ntBASIC2.83□□□□□ -1.96
TRIM47Q96LD4 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.82□□□□□ -1.96
TRIM47Q96LD4 SNORA40.6-201ENST00000391153 128 ntBASIC2.82□□□□□ -1.96
TRIM47Q96LD4 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.82□□□□□ -1.96
TRIM47Q96LD4 RNU7-43P-201ENST00000516554 64 ntBASIC2.82□□□□□ -1.96
TRIM47Q96LD4 Y_RNA.722-201ENST00000517279 114 ntBASIC2.82□□□□□ -1.96
TRIM47Q96LD4 MIR5094-201ENST00000578766 85 ntBASIC2.82□□□□□ -1.96
TRIM47Q96LD4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.81□□□□□ -1.96
TRIM47Q96LD4 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
TRIM47Q96LD4 VTRNA1-1-201ENST00000363120 99 ntBASIC2.81□□□□□ -1.96
TRIM47Q96LD4 AL023284.1-201ENST00000403956 276 ntBASIC2.81□□□□□ -1.96
TRIM47Q96LD4 RNU7-106P-201ENST00000459514 67 ntBASIC2.81□□□□□ -1.96
TRIM47Q96LD4 MIR7978-201ENST00000636158 59 ntBASIC2.81□□□□□ -1.96
TRIM47Q96LD4 MIR660-201ENST00000385235 97 ntBASIC2.8□□□□□ -1.96
TRIM47Q96LD4 RNU6-604P-201ENST00000390917 100 ntBASIC2.8□□□□□ -1.96
TRIM47Q96LD4 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.8□□□□□ -1.96
TRIM47Q96LD4 Y_RNA.606-201ENST00000410579 103 ntBASIC2.8□□□□□ -1.96
TRIM47Q96LD4 AC121758.2-201ENST00000553271 193 ntBASIC2.8□□□□□ -1.96
TRIM47Q96LD4 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
TRIM47Q96LD4 RNY4P3-201ENST00000365254 95 ntBASIC2.79□□□□□ -1.96
TRIM47Q96LD4 RNU6-220P-201ENST00000390919 107 ntBASIC2.79□□□□□ -1.96
TRIM47Q96LD4 HMGN2P35-201ENST00000412164 270 ntBASIC2.79□□□□□ -1.96
TRIM47Q96LD4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.79□□□□□ -1.96
TRIM47Q96LD4 AL096861.1-201ENST00000610899 123 ntBASIC2.79□□□□□ -1.96
TRIM47Q96LD4 AL513423.1-201ENST00000621695 132 ntBASIC2.79□□□□□ -1.96
TRIM47Q96LD4 MIR6873-201ENST00000622788 63 ntBASIC2.79□□□□□ -1.96
TRIM47Q96LD4 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.79□□□□□ -1.96
TRIM47Q96LD4 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM47Q96LD4 RNU6-1079P-201ENST00000362861 110 ntBASIC2.78□□□□□ -1.96
TRIM47Q96LD4 HMGN2P23-201ENST00000456759 269 ntBASIC2.78□□□□□ -1.96
TRIM47Q96LD4 AL691482.2-201ENST00000457453 84 ntBASIC2.78□□□□□ -1.96
TRIM47Q96LD4 RPL23AP42-201ENST00000471152 471 ntBASIC2.78□□□□□ -1.96
TRIM47Q96LD4 RNA5SP445-201ENST00000515889 115 ntBASIC2.78□□□□□ -1.96
TRIM47Q96LD4 AC021506.2-201ENST00000612354 169 ntBASIC2.78□□□□□ -1.96
TRIM47Q96LD4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
TRIM47Q96LD4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM47Q96LD4 Z82195.2-201ENST00000612348 18351 ntBASIC2.77□□□□□ -1.97
TRIM47Q96LD4 RNU6-1187P-201ENST00000364771 110 ntBASIC2.77□□□□□ -1.97
TRIM47Q96LD4 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
TRIM47Q96LD4 MIR3140-201ENST00000583685 90 ntBASIC2.77□□□□□ -1.97
TRIM47Q96LD4 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
TRIM47Q96LD4 AL449363.1-201ENST00000617815 186 ntBASIC2.77□□□□□ -1.97
TRIM47Q96LD4 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
TRIM47Q96LD4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM47Q96LD4 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM47Q96LD4 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
TRIM47Q96LD4 MIR6073-201ENST00000352083 89 ntBASIC2.76□□□□□ -1.97
TRIM47Q96LD4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
TRIM47Q96LD4 RNU2-19P-201ENST00000517288 84 ntBASIC2.76□□□□□ -1.97
TRIM47Q96LD4 MIR4251-201ENST00000635819 61 ntBASIC2.76□□□□□ -1.97
TRIM47Q96LD4 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
TRIM47Q96LD4 Y_RNA.239-201ENST00000364444 113 ntBASIC2.75□□□□□ -1.97
TRIM47Q96LD4 Y_RNA.338-201ENST00000365320 114 ntBASIC2.75□□□□□ -1.97
TRIM47Q96LD4 MIR520C-201ENST00000385005 87 ntBASIC2.75□□□□□ -1.97
TRIM47Q96LD4 SNORD63B-201ENST00000411005 70 ntBASIC2.75□□□□□ -1.97
TRIM47Q96LD4 AC011753.1-201ENST00000451001 220 ntBASIC2.75□□□□□ -1.97
TRIM47Q96LD4 snoU13.2-201ENST00000459201 104 ntBASIC2.75□□□□□ -1.97
TRIM47Q96LD4 MIR5089-201ENST00000580047 84 ntBASIC2.75□□□□□ -1.97
TRIM47Q96LD4 MIR3935-201ENST00000583472 104 ntBASIC2.75□□□□□ -1.97
TRIM47Q96LD4 U6.81-201ENST00000612550 106 ntBASIC2.75□□□□□ -1.97
TRIM47Q96LD4 RNU1-58P-201ENST00000362413 163 ntBASIC2.74□□□□□ -1.97
TRIM47Q96LD4 RNA5SP456-201ENST00000364002 114 ntBASIC2.74□□□□□ -1.97
TRIM47Q96LD4 RNU6-808P-201ENST00000391233 108 ntBASIC2.74□□□□□ -1.97
TRIM47Q96LD4 AC026436.1-201ENST00000510537 270 ntBASIC2.74□□□□□ -1.97
TRIM47Q96LD4 MIR1291-201ENST00000627649 87 ntBASIC2.74□□□□□ -1.97
TRIM47Q96LD4 AC016717.2-201ENST00000609089 5141 ntBASIC2.73□□□□□ -1.97
TRIM47Q96LD4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TRIM47Q96LD4 Y_RNA.164-201ENST00000363709 102 ntBASIC2.73□□□□□ -1.97
TRIM47Q96LD4 RNU6-824P-201ENST00000363724 104 ntBASIC2.73□□□□□ -1.97
TRIM47Q96LD4 RNU6-936P-201ENST00000384005 107 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms