Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CALR3Q96L12 HSBP1P2-201ENST00000299671 229 ntBASIC2.06□□□□□ -2.08
CALR3Q96L12 U8.2-201ENST00000363156 134 ntBASIC2.06□□□□□ -2.08
CALR3Q96L12 RNU6-813P-201ENST00000384691 107 ntBASIC2.06□□□□□ -2.08
CALR3Q96L12 RNU6-972P-201ENST00000391208 107 ntBASIC2.06□□□□□ -2.08
CALR3Q96L12 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.06□□□□□ -2.08
CALR3Q96L12 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.06□□□□□ -2.08
CALR3Q96L12 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.06□□□□□ -2.08
CALR3Q96L12 RNU7-90P-201ENST00000459216 62 ntBASIC2.06□□□□□ -2.08
CALR3Q96L12 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC2.06□□□□□ -2.08
CALR3Q96L12 AC008163.1-202ENST00000636004 2889 ntBASIC2.05□□□□□ -2.08
CALR3Q96L12 Y_RNA.119-201ENST00000363301 96 ntBASIC2.05□□□□□ -2.08
CALR3Q96L12 RNU6-49P-201ENST00000384256 107 ntBASIC2.05□□□□□ -2.08
CALR3Q96L12 Y_RNA.567-201ENST00000384736 106 ntBASIC2.05□□□□□ -2.08
CALR3Q96L12 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.05□□□□□ -2.08
CALR3Q96L12 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.05□□□□□ -2.08
CALR3Q96L12 snoU13.21-201ENST00000459368 105 ntBASIC2.05□□□□□ -2.08
CALR3Q96L12 SNORA70.22-201ENST00000517160 124 ntBASIC2.05□□□□□ -2.08
CALR3Q96L12 MIR4500-201ENST00000579472 76 ntBASIC2.05□□□□□ -2.08
CALR3Q96L12 AC090897.1-201ENST00000580909 226 ntBASIC2.05□□□□□ -2.08
CALR3Q96L12 MIR4491-201ENST00000581087 68 ntBASIC2.05□□□□□ -2.08
CALR3Q96L12 RNU1-36P-201ENST00000365130 165 ntBASIC2.04□□□□□ -2.08
CALR3Q96L12 RNU6-934P-201ENST00000365154 107 ntBASIC2.04□□□□□ -2.08
CALR3Q96L12 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.04□□□□□ -2.08
CALR3Q96L12 RNU6-887P-201ENST00000410660 100 ntBASIC2.04□□□□□ -2.08
CALR3Q96L12 SNORD83.1-201ENST00000411362 77 ntBASIC2.04□□□□□ -2.08
CALR3Q96L12 RNU7-185P-201ENST00000459215 60 ntBASIC2.04□□□□□ -2.08
CALR3Q96L12 AC023827.1-201ENST00000569247 97 ntBASIC2.04□□□□□ -2.08
CALR3Q96L12 AC023934.1-201ENST00000574529 2389 ntBASIC2.04□□□□□ -2.08
CALR3Q96L12 RNU6-86P-201ENST00000606534 107 ntBASIC2.04□□□□□ -2.08
CALR3Q96L12 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.04□□□□□ -2.08
CALR3Q96L12 U7.3-201ENST00000616123 62 ntBASIC2.04□□□□□ -2.08
CALR3Q96L12 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.04□□□□□ -2.08
CALR3Q96L12 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.03□□□□□ -2.08
CALR3Q96L12 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CALR3Q96L12 MIR1257-201ENST00000408490 117 ntBASIC2.03□□□□□ -2.08
CALR3Q96L12 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.03□□□□□ -2.08
CALR3Q96L12 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CALR3Q96L12 Y_RNA.173-201ENST00000363776 113 ntBASIC2.02□□□□□ -2.09
CALR3Q96L12 Y_RNA.290-201ENST00000364879 114 ntBASIC2.02□□□□□ -2.09
CALR3Q96L12 RNU6-294P-201ENST00000364999 102 ntBASIC2.02□□□□□ -2.09
CALR3Q96L12 RNU6-53P-201ENST00000365367 106 ntBASIC2.02□□□□□ -2.09
CALR3Q96L12 Y_RNA.783-201ENST00000613546 102 ntBASIC2.02□□□□□ -2.09
CALR3Q96L12 RNY1P7-201ENST00000384743 110 ntBASIC2.01□□□□□ -2.09
CALR3Q96L12 SNORD12-201ENST00000391002 90 ntBASIC2.01□□□□□ -2.09
CALR3Q96L12 Y_RNA.588-201ENST00000391254 102 ntBASIC2.01□□□□□ -2.09
CALR3Q96L12 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
CALR3Q96L12 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.01□□□□□ -2.09
CALR3Q96L12 RNU6-1244P-201ENST00000363614 108 ntBASIC2□□□□□ -2.09
CALR3Q96L12 Y_RNA.510-201ENST00000384511 114 ntBASIC2□□□□□ -2.09
CALR3Q96L12 RNU6-162P-201ENST00000516228 103 ntBASIC2□□□□□ -2.09
CALR3Q96L12 RNU6-844P-201ENST00000517175 102 ntBASIC2□□□□□ -2.09
CALR3Q96L12 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
CALR3Q96L12 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
CALR3Q96L12 RNU6-403P-201ENST00000363163 104 ntBASIC1.99□□□□□ -2.09
CALR3Q96L12 RNU4-58P-201ENST00000363192 141 ntBASIC1.99□□□□□ -2.09
CALR3Q96L12 SNORA64-201ENST00000384674 134 ntBASIC1.99□□□□□ -2.09
CALR3Q96L12 RNU4-83P-201ENST00000410863 133 ntBASIC1.99□□□□□ -2.09
CALR3Q96L12 MIR4771-2-201ENST00000577758 74 ntBASIC1.99□□□□□ -2.09
CALR3Q96L12 MIR4771-1-201ENST00000582617 74 ntBASIC1.99□□□□□ -2.09
CALR3Q96L12 SNORA16.1-201ENST00000364597 132 ntBASIC1.98□□□□□ -2.09
CALR3Q96L12 SNORA72.6-201ENST00000384520 129 ntBASIC1.98□□□□□ -2.09
CALR3Q96L12 BTF3P4-201ENST00000418852 495 ntBASIC1.98□□□□□ -2.09
CALR3Q96L12 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CALR3Q96L12 AC103810.7-201ENST00000607821 91 ntBASIC1.98□□□□□ -2.09
CALR3Q96L12 MIR4679-1-201ENST00000637619 75 ntBASIC1.98□□□□□ -2.09
CALR3Q96L12 RNU6-1125P-201ENST00000363601 107 ntBASIC1.97□□□□□ -2.09
CALR3Q96L12 RNU6-480P-201ENST00000384332 107 ntBASIC1.97□□□□□ -2.09
CALR3Q96L12 MIR222-201ENST00000384992 110 ntBASIC1.97□□□□□ -2.09
CALR3Q96L12 RNU6-994P-201ENST00000410507 111 ntBASIC1.97□□□□□ -2.09
CALR3Q96L12 RPS26P5-201ENST00000418544 335 ntBASIC1.97□□□□□ -2.09
CALR3Q96L12 RNU1-98P-201ENST00000458992 160 ntBASIC1.97□□□□□ -2.09
CALR3Q96L12 RNU6-531P-201ENST00000516694 104 ntBASIC1.97□□□□□ -2.09
CALR3Q96L12 SNORA25.16-201ENST00000516741 121 ntBASIC1.97□□□□□ -2.09
CALR3Q96L12 MIR4672-201ENST00000583126 81 ntBASIC1.97□□□□□ -2.09
CALR3Q96L12 AL590808.1-201ENST00000618696 141 ntBASIC1.97□□□□□ -2.09
CALR3Q96L12 RNU6-571P-201ENST00000384128 107 ntBASIC1.96□□□□□ -2.1
CALR3Q96L12 MIR125B2-201ENST00000385128 89 ntBASIC1.96□□□□□ -2.1
CALR3Q96L12 SNRPGP12-201ENST00000449481 213 ntBASIC1.96□□□□□ -2.1
CALR3Q96L12 RNU7-40P-201ENST00000516397 64 ntBASIC1.96□□□□□ -2.1
CALR3Q96L12 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CALR3Q96L12 SNORD116-10-201ENST00000363791 102 ntBASIC1.95□□□□□ -2.1
CALR3Q96L12 SNORD58A-201ENST00000383875 65 ntBASIC1.95□□□□□ -2.1
CALR3Q96L12 Y_RNA.558-201ENST00000384685 113 ntBASIC1.95□□□□□ -2.1
CALR3Q96L12 RN7SKP223-201ENST00000410582 62 ntBASIC1.95□□□□□ -2.1
CALR3Q96L12 RNA5SP182-201ENST00000516064 82 ntBASIC1.95□□□□□ -2.1
CALR3Q96L12 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.95□□□□□ -2.1
CALR3Q96L12 RNU4-82P-201ENST00000362443 140 ntBASIC1.94□□□□□ -2.1
CALR3Q96L12 SNORA25-201ENST00000384384 134 ntBASIC1.94□□□□□ -2.1
CALR3Q96L12 Z98742.3-201ENST00000418637 326 ntBASIC1.94□□□□□ -2.1
CALR3Q96L12 BX276092.1-201ENST00000427368 251 ntBASIC1.94□□□□□ -2.1
CALR3Q96L12 RNU6-1194P-201ENST00000516208 104 ntBASIC1.94□□□□□ -2.1
CALR3Q96L12 RNU6-850P-201ENST00000516934 103 ntBASIC1.94□□□□□ -2.1
CALR3Q96L12 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CALR3Q96L12 RNA5SP327-201ENST00000362494 101 ntBASIC1.93□□□□□ -2.1
CALR3Q96L12 SNORD48-201ENST00000364953 64 ntBASIC1.93□□□□□ -2.1
CALR3Q96L12 AC015818.7-201ENST00000428754 109 ntBASIC1.93□□□□□ -2.1
CALR3Q96L12 AC087499.7-201ENST00000441958 109 ntBASIC1.93□□□□□ -2.1
CALR3Q96L12 AC026421.1-201ENST00000519101 163 ntBASIC1.93□□□□□ -2.1
CALR3Q96L12 AC020891.4-201ENST00000605745 93 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms