Protein–RNA interactions for Protein: Q96KP6

TNIP3, TNFAIP3-interacting protein 3, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3Q96KP6 MIR6866-201ENST00000638146 69 ntBASIC0.84□□□□□ -2.27
TNIP3Q96KP6 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.83□□□□□ -2.28
TNIP3Q96KP6 SNORD18B-201ENST00000365659 72 ntBASIC0.83□□□□□ -2.28
TNIP3Q96KP6 MIR146A-201ENST00000385201 99 ntBASIC0.83□□□□□ -2.28
TNIP3Q96KP6 RNU6-255P-201ENST00000516957 105 ntBASIC0.83□□□□□ -2.28
TNIP3Q96KP6 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.83□□□□□ -2.28
TNIP3Q96KP6 RNU6-508P-201ENST00000363231 103 ntBASIC0.82□□□□□ -2.28
TNIP3Q96KP6 RNU6-804P-201ENST00000384286 107 ntBASIC0.82□□□□□ -2.28
TNIP3Q96KP6 Y_RNA.506-201ENST00000384494 102 ntBASIC0.82□□□□□ -2.28
TNIP3Q96KP6 RNU7-113P-201ENST00000459273 62 ntBASIC0.82□□□□□ -2.28
TNIP3Q96KP6 Y_RNA.651-201ENST00000459380 103 ntBASIC0.82□□□□□ -2.28
TNIP3Q96KP6 MTND5P41-201ENST00000517498 206 ntBASIC0.82□□□□□ -2.28
TNIP3Q96KP6 AC112693.2-201ENST00000556538 232 ntBASIC0.82□□□□□ -2.28
TNIP3Q96KP6 AC013244.2-201ENST00000603396 103 ntBASIC0.82□□□□□ -2.28
TNIP3Q96KP6 AC010487.4-201ENST00000637027 61 ntBASIC0.82□□□□□ -2.28
TNIP3Q96KP6 MIR6086-201ENST00000638065 55 ntBASIC0.82□□□□□ -2.28
TNIP3Q96KP6 Y_RNA.280-201ENST00000364765 112 ntBASIC0.81□□□□□ -2.28
TNIP3Q96KP6 RNU4-11P-201ENST00000365287 132 ntBASIC0.81□□□□□ -2.28
TNIP3Q96KP6 U8.15-201ENST00000390947 134 ntBASIC0.81□□□□□ -2.28
TNIP3Q96KP6 RNU6-240P-201ENST00000516098 97 ntBASIC0.81□□□□□ -2.28
TNIP3Q96KP6 CYP3A137P-201ENST00000562436 69 ntBASIC0.81□□□□□ -2.28
TNIP3Q96KP6 MIR3612-201ENST00000579753 87 ntBASIC0.81□□□□□ -2.28
TNIP3Q96KP6 AC090897.1-201ENST00000580909 226 ntBASIC0.81□□□□□ -2.28
TNIP3Q96KP6 AC021753.1-201ENST00000635724 168 ntBASIC0.81□□□□□ -2.28
TNIP3Q96KP6 Y_RNA.170-201ENST00000363746 110 ntBASIC0.8□□□□□ -2.28
TNIP3Q96KP6 Y_RNA.398-201ENST00000383952 99 ntBASIC0.8□□□□□ -2.28
TNIP3Q96KP6 RNU6-949P-201ENST00000384040 107 ntBASIC0.8□□□□□ -2.28
TNIP3Q96KP6 Y_RNA.470-201ENST00000384307 117 ntBASIC0.8□□□□□ -2.28
TNIP3Q96KP6 RNU4-83P-201ENST00000410863 133 ntBASIC0.8□□□□□ -2.28
TNIP3Q96KP6 RNU6-1086P-201ENST00000410930 100 ntBASIC0.8□□□□□ -2.28
TNIP3Q96KP6 RNA5SP330-201ENST00000517096 96 ntBASIC0.8□□□□□ -2.28
TNIP3Q96KP6 MIR4305-201ENST00000583252 102 ntBASIC0.8□□□□□ -2.28
TNIP3Q96KP6 MIR8087-201ENST00000612745 78 ntBASIC0.8□□□□□ -2.28
TNIP3Q96KP6 Y_RNA.778-201ENST00000620203 90 ntBASIC0.8□□□□□ -2.28
TNIP3Q96KP6 RNU6-151P-201ENST00000364158 107 ntBASIC0.79□□□□□ -2.28
TNIP3Q96KP6 RNU6-309P-201ENST00000364573 106 ntBASIC0.79□□□□□ -2.28
TNIP3Q96KP6 Y_RNA.294-201ENST00000364916 102 ntBASIC0.79□□□□□ -2.28
TNIP3Q96KP6 RNY1P13-201ENST00000365030 105 ntBASIC0.79□□□□□ -2.28
TNIP3Q96KP6 SNORA36.2-201ENST00000384004 127 ntBASIC0.79□□□□□ -2.28
TNIP3Q96KP6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.79□□□□□ -2.28
TNIP3Q96KP6 AL512326.2-201ENST00000426359 151 ntBASIC0.79□□□□□ -2.28
TNIP3Q96KP6 RNU7-200P-201ENST00000516105 62 ntBASIC0.79□□□□□ -2.28
TNIP3Q96KP6 RNA5SP33-201ENST00000516687 98 ntBASIC0.79□□□□□ -2.28
TNIP3Q96KP6 AC133485.4-201ENST00000561835 220 ntBASIC0.79□□□□□ -2.28
TNIP3Q96KP6 AC138907.4-201ENST00000570107 226 ntBASIC0.79□□□□□ -2.28
TNIP3Q96KP6 MIR3121-201ENST00000579680 77 ntBASIC0.79□□□□□ -2.28
TNIP3Q96KP6 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
TNIP3Q96KP6 HSBP1P2-201ENST00000299671 229 ntBASIC0.78□□□□□ -2.28
TNIP3Q96KP6 SNORD115-2-201ENST00000362842 82 ntBASIC0.78□□□□□ -2.28
TNIP3Q96KP6 Y_RNA.120-201ENST00000363304 110 ntBASIC0.78□□□□□ -2.28
TNIP3Q96KP6 SNORD115-20-201ENST00000365099 82 ntBASIC0.78□□□□□ -2.28
TNIP3Q96KP6 RNU6-449P-201ENST00000383914 107 ntBASIC0.78□□□□□ -2.28
TNIP3Q96KP6 AL603914.1-201ENST00000401964 204 ntBASIC0.78□□□□□ -2.28
TNIP3Q96KP6 AC096949.1-201ENST00000412047 152 ntBASIC0.78□□□□□ -2.28
TNIP3Q96KP6 RNU7-79P-201ENST00000516082 62 ntBASIC0.78□□□□□ -2.28
TNIP3Q96KP6 RNU2-35P-201ENST00000516446 142 ntBASIC0.78□□□□□ -2.28
TNIP3Q96KP6 Y_RNA.686-201ENST00000516548 134 ntBASIC0.78□□□□□ -2.28
TNIP3Q96KP6 Y_RNA.690-201ENST00000516603 95 ntBASIC0.78□□□□□ -2.28
TNIP3Q96KP6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.78□□□□□ -2.28
TNIP3Q96KP6 AC004812.1-201ENST00000540773 146 ntBASIC0.78□□□□□ -2.28
TNIP3Q96KP6 AC021443.1-201ENST00000604478 211 ntBASIC0.78□□□□□ -2.28
TNIP3Q96KP6 MIR6835-201ENST00000621552 64 ntBASIC0.78□□□□□ -2.28
TNIP3Q96KP6 MIR18A-201ENST00000362310 71 ntBASIC0.77□□□□□ -2.29
TNIP3Q96KP6 RNY1P5-201ENST00000383890 115 ntBASIC0.77□□□□□ -2.29
TNIP3Q96KP6 Y_RNA.400-201ENST00000383963 111 ntBASIC0.77□□□□□ -2.29
TNIP3Q96KP6 MIR569-201ENST00000385228 96 ntBASIC0.77□□□□□ -2.29
TNIP3Q96KP6 SNORD100-201ENST00000408573 76 ntBASIC0.77□□□□□ -2.29
TNIP3Q96KP6 RNU7-35P-201ENST00000517174 62 ntBASIC0.77□□□□□ -2.29
TNIP3Q96KP6 AP001340.1-201ENST00000624405 217 ntBASIC0.77□□□□□ -2.29
TNIP3Q96KP6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.76□□□□□ -2.29
TNIP3Q96KP6 RNU6-403P-201ENST00000363163 104 ntBASIC0.76□□□□□ -2.29
TNIP3Q96KP6 Y_RNA.270-201ENST00000364693 104 ntBASIC0.76□□□□□ -2.29
TNIP3Q96KP6 SNORD116-18-201ENST00000383961 92 ntBASIC0.76□□□□□ -2.29
TNIP3Q96KP6 RNY1P8-201ENST00000383970 114 ntBASIC0.76□□□□□ -2.29
TNIP3Q96KP6 Y_RNA.531-201ENST00000384589 121 ntBASIC0.76□□□□□ -2.29
TNIP3Q96KP6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
TNIP3Q96KP6 AC002350.1-201ENST00000490759 375 ntBASIC0.76□□□□□ -2.29
TNIP3Q96KP6 RNA5SP121-201ENST00000516537 101 ntBASIC0.76□□□□□ -2.29
TNIP3Q96KP6 RNU6-448P-201ENST00000517052 107 ntBASIC0.76□□□□□ -2.29
TNIP3Q96KP6 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.76□□□□□ -2.29
TNIP3Q96KP6 MIR4491-201ENST00000581087 68 ntBASIC0.76□□□□□ -2.29
TNIP3Q96KP6 MIR3668-201ENST00000582138 75 ntBASIC0.76□□□□□ -2.29
TNIP3Q96KP6 MIR8066-201ENST00000617280 78 ntBASIC0.76□□□□□ -2.29
TNIP3Q96KP6 Y_RNA.42-201ENST00000362660 108 ntBASIC0.75□□□□□ -2.29
TNIP3Q96KP6 Y_RNA.215-201ENST00000364204 112 ntBASIC0.75□□□□□ -2.29
TNIP3Q96KP6 Y_RNA.588-201ENST00000391254 102 ntBASIC0.75□□□□□ -2.29
TNIP3Q96KP6 RNU7-164P-201ENST00000459221 62 ntBASIC0.75□□□□□ -2.29
TNIP3Q96KP6 IGKV1-22-201ENST00000524313 326 ntBASIC0.75□□□□□ -2.29
TNIP3Q96KP6 AC133485.1-201ENST00000567176 124 ntBASIC0.75□□□□□ -2.29
TNIP3Q96KP6 AC138907.6-201ENST00000568401 126 ntBASIC0.75□□□□□ -2.29
TNIP3Q96KP6 Y_RNA.13-201ENST00000362403 112 ntBASIC0.74□□□□□ -2.29
TNIP3Q96KP6 RNU4-45P-201ENST00000365469 141 ntBASIC0.74□□□□□ -2.29
TNIP3Q96KP6 SNORA32-201ENST00000384072 121 ntBASIC0.74□□□□□ -2.29
TNIP3Q96KP6 MIR1270-201ENST00000459320 83 ntBASIC0.74□□□□□ -2.29
TNIP3Q96KP6 Y_RNA.8-201ENST00000362353 102 ntBASIC0.73□□□□□ -2.29
TNIP3Q96KP6 MIR140-201ENST00000385282 100 ntBASIC0.73□□□□□ -2.29
TNIP3Q96KP6 MIR548X2-201ENST00000579776 100 ntBASIC0.73□□□□□ -2.29
TNIP3Q96KP6 MIR548AE2-201ENST00000583456 67 ntBASIC0.73□□□□□ -2.29
TNIP3Q96KP6 AC108081.1-201ENST00000604358 221 ntBASIC0.73□□□□□ -2.29
TNIP3Q96KP6 MIR6082-201ENST00000613604 109 ntBASIC0.73□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 238.9 ms