Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 SNORA4-201ENST00000584302 138 ntBASIC1.11□□□□□ -2.23
VPS50Q96JG6 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.11□□□□□ -2.23
VPS50Q96JG6 AC105081.1-201ENST00000617727 106 ntBASIC1.11□□□□□ -2.23
VPS50Q96JG6 U6.95-201ENST00000636931 70 ntBASIC1.11□□□□□ -2.23
VPS50Q96JG6 Y_RNA.191-201ENST00000363972 113 ntBASIC1.1□□□□□ -2.23
VPS50Q96JG6 MT-TF-201ENST00000387314 71 ntBASIC1.1□□□□□ -2.23
VPS50Q96JG6 MIR1276-201ENST00000408707 83 ntBASIC1.1□□□□□ -2.23
VPS50Q96JG6 MIR18B-201ENST00000454574 71 ntBASIC1.1□□□□□ -2.23
VPS50Q96JG6 MIR1255B1-201ENST00000636325 63 ntBASIC1.1□□□□□ -2.23
VPS50Q96JG6 AL391516.1-201ENST00000554380 2449 ntBASIC1.1□□□□□ -2.23
VPS50Q96JG6 AC023934.1-201ENST00000574529 2389 ntBASIC1.1□□□□□ -2.23
VPS50Q96JG6 MIR548D2-201ENST00000384955 97 ntBASIC1.09□□□□□ -2.23
VPS50Q96JG6 MIR548A3-201ENST00000385297 97 ntBASIC1.09□□□□□ -2.23
VPS50Q96JG6 MIR759-201ENST00000390224 91 ntBASIC1.09□□□□□ -2.23
VPS50Q96JG6 RNU6-1307P-201ENST00000391012 103 ntBASIC1.09□□□□□ -2.23
VPS50Q96JG6 RPS26P5-201ENST00000418544 335 ntBASIC1.09□□□□□ -2.23
VPS50Q96JG6 RNU7-185P-201ENST00000459215 60 ntBASIC1.09□□□□□ -2.23
VPS50Q96JG6 RNU7-137P-201ENST00000516788 62 ntBASIC1.09□□□□□ -2.23
VPS50Q96JG6 RNA5SP102-201ENST00000516865 106 ntBASIC1.09□□□□□ -2.23
VPS50Q96JG6 MTND5P34-201ENST00000568888 325 ntBASIC1.09□□□□□ -2.23
VPS50Q96JG6 AC103810.9-201ENST00000606688 112 ntBASIC1.09□□□□□ -2.23
VPS50Q96JG6 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.09□□□□□ -2.23
VPS50Q96JG6 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.09□□□□□ -2.23
VPS50Q96JG6 Y_RNA.549-201ENST00000384657 102 ntBASIC1.08□□□□□ -2.24
VPS50Q96JG6 UBL5P1-201ENST00000507979 193 ntBASIC1.08□□□□□ -2.24
VPS50Q96JG6 AL670379.3-201ENST00000605040 251 ntBASIC1.08□□□□□ -2.24
VPS50Q96JG6 AL035470.1-201ENST00000622571 220 ntBASIC1.08□□□□□ -2.24
VPS50Q96JG6 SNORD115-19-201ENST00000363098 82 ntBASIC1.07□□□□□ -2.24
VPS50Q96JG6 SNORD115-18-201ENST00000363293 82 ntBASIC1.07□□□□□ -2.24
VPS50Q96JG6 RNY4P6-201ENST00000363667 96 ntBASIC1.07□□□□□ -2.24
VPS50Q96JG6 SNORD115-17-201ENST00000364612 82 ntBASIC1.07□□□□□ -2.24
VPS50Q96JG6 RNU6-1335P-201ENST00000365426 107 ntBASIC1.07□□□□□ -2.24
VPS50Q96JG6 MIR206-201ENST00000384872 86 ntBASIC1.07□□□□□ -2.24
VPS50Q96JG6 MIR518E-201ENST00000385252 88 ntBASIC1.07□□□□□ -2.24
VPS50Q96JG6 SNORD89-201ENST00000390981 114 ntBASIC1.07□□□□□ -2.24
VPS50Q96JG6 SNORD77B-201ENST00000391112 67 ntBASIC1.07□□□□□ -2.24
VPS50Q96JG6 MIR942-201ENST00000401111 86 ntBASIC1.07□□□□□ -2.24
VPS50Q96JG6 MIR548I2-201ENST00000408348 149 ntBASIC1.07□□□□□ -2.24
VPS50Q96JG6 SNORD93-201ENST00000408813 74 ntBASIC1.07□□□□□ -2.24
VPS50Q96JG6 AC007012.1-201ENST00000567192 175 ntBASIC1.07□□□□□ -2.24
VPS50Q96JG6 MIR4676-201ENST00000583078 72 ntBASIC1.07□□□□□ -2.24
VPS50Q96JG6 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.07□□□□□ -2.24
VPS50Q96JG6 FAM71BP1-201ENST00000604431 523 ntBASIC1.07□□□□□ -2.24
VPS50Q96JG6 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
VPS50Q96JG6 Y_RNA.224-201ENST00000364308 111 ntBASIC1.06□□□□□ -2.24
VPS50Q96JG6 RNU6-1187P-201ENST00000364771 110 ntBASIC1.06□□□□□ -2.24
VPS50Q96JG6 RNU1-36P-201ENST00000365130 165 ntBASIC1.06□□□□□ -2.24
VPS50Q96JG6 RNU6-53P-201ENST00000365367 106 ntBASIC1.06□□□□□ -2.24
VPS50Q96JG6 Y_RNA.362-201ENST00000365518 110 ntBASIC1.06□□□□□ -2.24
VPS50Q96JG6 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
VPS50Q96JG6 MIR100-201ENST00000385259 80 ntBASIC1.06□□□□□ -2.24
VPS50Q96JG6 RNU6-1321P-201ENST00000390905 107 ntBASIC1.06□□□□□ -2.24
VPS50Q96JG6 RPL39P25-201ENST00000449384 154 ntBASIC1.06□□□□□ -2.24
VPS50Q96JG6 MIR4452-201ENST00000583004 71 ntBASIC1.06□□□□□ -2.24
VPS50Q96JG6 MIR1-1-201ENST00000362147 71 ntBASIC1.05□□□□□ -2.24
VPS50Q96JG6 Y_RNA.35-201ENST00000362601 101 ntBASIC1.05□□□□□ -2.24
VPS50Q96JG6 RNU6-429P-201ENST00000384582 108 ntBASIC1.05□□□□□ -2.24
VPS50Q96JG6 Y_RNA.588-201ENST00000391254 102 ntBASIC1.05□□□□□ -2.24
VPS50Q96JG6 MIR1257-201ENST00000408490 117 ntBASIC1.05□□□□□ -2.24
VPS50Q96JG6 MIR1827-201ENST00000408549 66 ntBASIC1.05□□□□□ -2.24
VPS50Q96JG6 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.05□□□□□ -2.24
VPS50Q96JG6 MIR4661-201ENST00000582720 75 ntBASIC1.05□□□□□ -2.24
VPS50Q96JG6 RNU6-1290P-201ENST00000362957 109 ntBASIC1.04□□□□□ -2.24
VPS50Q96JG6 SNORD114-10-201ENST00000363409 72 ntBASIC1.04□□□□□ -2.24
VPS50Q96JG6 SNORA63.5-201ENST00000363548 123 ntBASIC1.04□□□□□ -2.24
VPS50Q96JG6 RNU6-1144P-201ENST00000384247 104 ntBASIC1.04□□□□□ -2.24
VPS50Q96JG6 RNU6-476P-201ENST00000384726 107 ntBASIC1.04□□□□□ -2.24
VPS50Q96JG6 MIR200A-201ENST00000384875 90 ntBASIC1.04□□□□□ -2.24
VPS50Q96JG6 MIR125B2-201ENST00000385128 89 ntBASIC1.04□□□□□ -2.24
VPS50Q96JG6 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.04□□□□□ -2.24
VPS50Q96JG6 RNU7-2P-201ENST00000516096 62 ntBASIC1.04□□□□□ -2.24
VPS50Q96JG6 MIR4491-201ENST00000581087 68 ntBASIC1.04□□□□□ -2.24
VPS50Q96JG6 MIR4804-201ENST00000581683 73 ntBASIC1.04□□□□□ -2.24
VPS50Q96JG6 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.04□□□□□ -2.24
VPS50Q96JG6 MIR6129-201ENST00000616087 109 ntBASIC1.04□□□□□ -2.24
VPS50Q96JG6 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.04□□□□□ -2.24
VPS50Q96JG6 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.03□□□□□ -2.24
VPS50Q96JG6 Y_RNA.116-201ENST00000363292 103 ntBASIC1.03□□□□□ -2.24
VPS50Q96JG6 Y_RNA.291-201ENST00000364886 113 ntBASIC1.03□□□□□ -2.24
VPS50Q96JG6 SNORD114-24-201ENST00000365029 72 ntBASIC1.03□□□□□ -2.24
VPS50Q96JG6 Y_RNA.448-201ENST00000384185 108 ntBASIC1.03□□□□□ -2.24
VPS50Q96JG6 SNORD116-21-201ENST00000384507 92 ntBASIC1.03□□□□□ -2.24
VPS50Q96JG6 RNU6-1081P-201ENST00000384537 107 ntBASIC1.03□□□□□ -2.24
VPS50Q96JG6 RNU6-1064P-201ENST00000410626 104 ntBASIC1.03□□□□□ -2.24
VPS50Q96JG6 AC067940.1-201ENST00000458411 300 ntBASIC1.03□□□□□ -2.24
VPS50Q96JG6 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.03□□□□□ -2.24
VPS50Q96JG6 RNU6-977P-201ENST00000516411 103 ntBASIC1.03□□□□□ -2.24
VPS50Q96JG6 RNU6-521P-201ENST00000516663 105 ntBASIC1.03□□□□□ -2.24
VPS50Q96JG6 AL078603.1-201ENST00000603824 313 ntBASIC1.03□□□□□ -2.24
VPS50Q96JG6 AC008608.1-201ENST00000603910 127 ntBASIC1.03□□□□□ -2.24
VPS50Q96JG6 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
VPS50Q96JG6 RNU6-403P-201ENST00000363163 104 ntBASIC1.02□□□□□ -2.25
VPS50Q96JG6 SNORD115-35-201ENST00000365122 82 ntBASIC1.02□□□□□ -2.25
VPS50Q96JG6 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
VPS50Q96JG6 RNU4-83P-201ENST00000410863 133 ntBASIC1.02□□□□□ -2.25
VPS50Q96JG6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC1.02□□□□□ -2.25
VPS50Q96JG6 SNORA25.16-201ENST00000516741 121 ntBASIC1.02□□□□□ -2.25
VPS50Q96JG6 RNU7-156P-201ENST00000517214 74 ntBASIC1.02□□□□□ -2.25
VPS50Q96JG6 AC138749.4-201ENST00000563970 127 ntBASIC1.02□□□□□ -2.25
VPS50Q96JG6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 183.1 ms