Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RNU6-1076P-201ENST00000410397 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 RNU6-355P-201ENST00000410427 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 RNU6-791P-201ENST00000410467 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 RNU6-705P-201ENST00000410601 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 RNU6-1100P-201ENST00000410691 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 RNU6-860P-201ENST00000410860 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 RNU6-1217P-201ENST00000411276 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 RNU6-785P-201ENST00000411324 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 AL353765.1-201ENST00000605514 183 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 U6.90-201ENST00000614007 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 U6.70-201ENST00000620287 104 ntBASIC1.05□□□□□ -2.24
CHMP4CQ96CF2 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CHMP4CQ96CF2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
CHMP4CQ96CF2 MIR146A-201ENST00000385201 99 ntBASIC1.04□□□□□ -2.24
CHMP4CQ96CF2 RNU4-69P-201ENST00000410677 143 ntBASIC1.04□□□□□ -2.24
CHMP4CQ96CF2 RNU4-83P-201ENST00000410863 133 ntBASIC1.04□□□□□ -2.24
CHMP4CQ96CF2 MTND4LP9-201ENST00000427694 174 ntBASIC1.04□□□□□ -2.24
CHMP4CQ96CF2 RNU7-156P-201ENST00000517214 74 ntBASIC1.04□□□□□ -2.24
CHMP4CQ96CF2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
CHMP4CQ96CF2 U8.15-201ENST00000390947 134 ntBASIC1.03□□□□□ -2.24
CHMP4CQ96CF2 SNORD77B-201ENST00000391112 67 ntBASIC1.03□□□□□ -2.24
CHMP4CQ96CF2 MIR3133-201ENST00000583157 78 ntBASIC1.03□□□□□ -2.24
CHMP4CQ96CF2 AC211469.2-201ENST00000605461 205 ntBASIC1.03□□□□□ -2.24
CHMP4CQ96CF2 AL589743.1-201ENST00000551932 2712 ntBASIC1.02□□□□□ -2.25
CHMP4CQ96CF2 AL158147.1-201ENST00000443970 75 ntBASIC1.02□□□□□ -2.25
CHMP4CQ96CF2 RNU7-56P-201ENST00000458744 62 ntBASIC1.02□□□□□ -2.25
CHMP4CQ96CF2 RN7SKP19-201ENST00000516016 252 ntBASIC1.02□□□□□ -2.25
CHMP4CQ96CF2 MIR6788-201ENST00000618842 66 ntBASIC1.02□□□□□ -2.25
CHMP4CQ96CF2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
CHMP4CQ96CF2 RNU6-403P-201ENST00000363163 104 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 SNORD114-2-201ENST00000363953 78 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 RNU6-746P-201ENST00000384112 109 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 RNU6-257P-201ENST00000410238 98 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 RNU7-102P-201ENST00000458948 62 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 RNU6-351P-201ENST00000516097 100 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 RNU6-1223P-201ENST00000517124 104 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 AC022523.2-201ENST00000561045 150 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 AC011195.1-201ENST00000578177 177 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 MIR151B-201ENST00000584249 96 ntBASIC1.01□□□□□ -2.25
CHMP4CQ96CF2 RNU6-774P-201ENST00000363238 107 ntBASIC1□□□□□ -2.25
CHMP4CQ96CF2 MIR539-201ENST00000365690 78 ntBASIC1□□□□□ -2.25
CHMP4CQ96CF2 MIR759-201ENST00000390224 91 ntBASIC1□□□□□ -2.25
CHMP4CQ96CF2 MIR1263-201ENST00000408324 86 ntBASIC1□□□□□ -2.25
CHMP4CQ96CF2 SNORD92-201ENST00000585078 85 ntBASIC1□□□□□ -2.25
CHMP4CQ96CF2 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 Y_RNA.280-201ENST00000364765 112 ntBASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 SNORA72.6-201ENST00000384520 129 ntBASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 MIR605-201ENST00000385078 83 ntBASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 RNA5SP136-201ENST00000410906 107 ntBASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 PSMC1P5-201ENST00000512850 177 ntBASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 IGKV1-22-201ENST00000524313 326 ntBASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 FAM71BP1-201ENST00000604431 523 ntBASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 AC022709.1-201ENST00000615967 87 ntBASIC0.99□□□□□ -2.25
CHMP4CQ96CF2 RNU6-235P-201ENST00000362644 107 ntBASIC0.98□□□□□ -2.25
CHMP4CQ96CF2 Y_RNA.213-201ENST00000364178 111 ntBASIC0.98□□□□□ -2.25
CHMP4CQ96CF2 Y_RNA.466-201ENST00000384294 113 ntBASIC0.98□□□□□ -2.25
CHMP4CQ96CF2 MIR573-201ENST00000384964 99 ntBASIC0.98□□□□□ -2.25
CHMP4CQ96CF2 RNU6-1211P-201ENST00000459179 105 ntBASIC0.98□□□□□ -2.25
CHMP4CQ96CF2 MIR613-201ENST00000385248 95 ntBASIC0.97□□□□□ -2.25
CHMP4CQ96CF2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.97□□□□□ -2.25
CHMP4CQ96CF2 RNU6-1061P-201ENST00000516530 99 ntBASIC0.97□□□□□ -2.25
CHMP4CQ96CF2 SNORD67.1-201ENST00000516618 108 ntBASIC0.97□□□□□ -2.25
CHMP4CQ96CF2 AC133485.1-201ENST00000567176 124 ntBASIC0.97□□□□□ -2.25
CHMP4CQ96CF2 SNORD114-10-201ENST00000363409 72 ntBASIC0.96□□□□□ -2.26
CHMP4CQ96CF2 RNU6-1104P-201ENST00000384723 104 ntBASIC0.96□□□□□ -2.26
CHMP4CQ96CF2 AC244098.3-201ENST00000424803 96 ntBASIC0.96□□□□□ -2.26
CHMP4CQ96CF2 RNU7-137P-201ENST00000516788 62 ntBASIC0.96□□□□□ -2.26
CHMP4CQ96CF2 CYP3A137P-201ENST00000562436 69 ntBASIC0.96□□□□□ -2.26
CHMP4CQ96CF2 MIR4491-201ENST00000581087 68 ntBASIC0.96□□□□□ -2.26
CHMP4CQ96CF2 AC008608.1-201ENST00000603910 127 ntBASIC0.96□□□□□ -2.26
CHMP4CQ96CF2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.96□□□□□ -2.26
CHMP4CQ96CF2 MIR548M-201ENST00000408260 86 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 Y_RNA.617-201ENST00000410920 90 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 RNA5SP222-201ENST00000411039 105 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 DEFB131E-201ENST00000532329 154 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 AC090897.1-201ENST00000580909 226 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 MIR3163-201ENST00000581592 73 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 AC013244.2-201ENST00000603396 103 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 MIR6082-201ENST00000613604 109 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 MIR6866-201ENST00000638146 69 ntBASIC0.95□□□□□ -2.26
CHMP4CQ96CF2 Y_RNA.13-201ENST00000362403 112 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 Y_RNA.42-201ENST00000362660 108 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 SNORD50.2-201ENST00000365465 70 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 Y_RNA.540-201ENST00000384638 111 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 Y_RNA.586-201ENST00000391146 98 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 Y_RNA.588-201ENST00000391254 102 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 COX6CP6-201ENST00000490840 228 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 RNU7-6P-201ENST00000516845 62 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 MIR8066-201ENST00000617280 78 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 MIR6515-201ENST00000619843 57 ntBASIC0.94□□□□□ -2.26
CHMP4CQ96CF2 Y_RNA.198-201ENST00000364013 98 ntBASIC0.93□□□□□ -2.26
CHMP4CQ96CF2 RNU6-110P-201ENST00000384508 104 ntBASIC0.93□□□□□ -2.26
CHMP4CQ96CF2 Y_RNA.528-201ENST00000384575 108 ntBASIC0.93□□□□□ -2.26
CHMP4CQ96CF2 RNU6-781P-201ENST00000516377 101 ntBASIC0.93□□□□□ -2.26
CHMP4CQ96CF2 RNU6-448P-201ENST00000517052 107 ntBASIC0.93□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 209.1 ms