Protein–RNA interactions for Protein: Q6SPF0

SAMD1, Atherin, humanhuman

Predicted RBP Predictions only

Length 538 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD1Q6SPF0 AC026333.2-201ENST00000542164 106 ntBASIC3.9□□□□□ -1.79
SAMD1Q6SPF0 AC103810.8-201ENST00000607347 118 ntBASIC3.9□□□□□ -1.79
SAMD1Q6SPF0 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.79
SAMD1Q6SPF0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
SAMD1Q6SPF0 AC016717.2-201ENST00000609089 5141 ntBASIC3.89□□□□□ -1.79
SAMD1Q6SPF0 AC009487.2-201ENST00000420969 6821 ntBASIC3.89□□□□□ -1.79
SAMD1Q6SPF0 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SAMD1Q6SPF0 AC006989.1-201ENST00000427212 131 ntBASIC3.89□□□□□ -1.79
SAMD1Q6SPF0 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC3.89□□□□□ -1.79
SAMD1Q6SPF0 RNU6-287P-201ENST00000516230 98 ntBASIC3.89□□□□□ -1.79
SAMD1Q6SPF0 MIR4325-201ENST00000583049 90 ntBASIC3.89□□□□□ -1.79
SAMD1Q6SPF0 MIR6509-201ENST00000614603 85 ntBASIC3.89□□□□□ -1.79
SAMD1Q6SPF0 VTRNA1-1-201ENST00000363120 99 ntBASIC3.88□□□□□ -1.79
SAMD1Q6SPF0 RNA5SP299-201ENST00000391203 116 ntBASIC3.88□□□□□ -1.79
SAMD1Q6SPF0 SNORD75.2-201ENST00000408784 58 ntBASIC3.88□□□□□ -1.79
SAMD1Q6SPF0 RPS29P31-201ENST00000446147 164 ntBASIC3.88□□□□□ -1.79
SAMD1Q6SPF0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SAMD1Q6SPF0 MIR1185-1-201ENST00000408598 86 ntBASIC3.87□□□□□ -1.79
SAMD1Q6SPF0 RNA5SP341-201ENST00000516261 117 ntBASIC3.87□□□□□ -1.79
SAMD1Q6SPF0 AC104984.5-201ENST00000586878 94 ntBASIC3.87□□□□□ -1.79
SAMD1Q6SPF0 AC073869.9-201ENST00000641610 120 ntBASIC3.87□□□□□ -1.79
SAMD1Q6SPF0 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SAMD1Q6SPF0 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
SAMD1Q6SPF0 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SAMD1Q6SPF0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.86□□□□□ -1.79
SAMD1Q6SPF0 RNU6-1039P-201ENST00000383931 107 ntBASIC3.86□□□□□ -1.79
SAMD1Q6SPF0 RN7SL93P-201ENST00000463035 293 ntBASIC3.86□□□□□ -1.79
SAMD1Q6SPF0 RN7SL20P-201ENST00000488827 297 ntBASIC3.86□□□□□ -1.79
SAMD1Q6SPF0 MIR3938-201ENST00000582157 103 ntBASIC3.86□□□□□ -1.79
SAMD1Q6SPF0 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
SAMD1Q6SPF0 MIR103A2-201ENST00000362154 78 ntBASIC3.85□□□□□ -1.79
SAMD1Q6SPF0 RNA5SP432-201ENST00000362480 116 ntBASIC3.85□□□□□ -1.79
SAMD1Q6SPF0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SAMD1Q6SPF0 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.85□□□□□ -1.79
SAMD1Q6SPF0 MIR6715A-201ENST00000615929 79 ntBASIC3.85□□□□□ -1.79
SAMD1Q6SPF0 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.85□□□□□ -1.79
SAMD1Q6SPF0 RNU6-645P-201ENST00000364649 106 ntBASIC3.84□□□□□ -1.79
SAMD1Q6SPF0 RNU6-580P-201ENST00000365159 107 ntBASIC3.84□□□□□ -1.79
SAMD1Q6SPF0 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.84□□□□□ -1.79
SAMD1Q6SPF0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.84□□□□□ -1.79
SAMD1Q6SPF0 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
SAMD1Q6SPF0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.83□□□□□ -1.8
SAMD1Q6SPF0 RNU4-88P-201ENST00000411220 86 ntBASIC3.83□□□□□ -1.8
SAMD1Q6SPF0 snoU13.21-201ENST00000459368 105 ntBASIC3.83□□□□□ -1.8
SAMD1Q6SPF0 RN7SL499P-201ENST00000481141 276 ntBASIC3.83□□□□□ -1.8
SAMD1Q6SPF0 RNU6-765P-201ENST00000516916 99 ntBASIC3.83□□□□□ -1.8
SAMD1Q6SPF0 NAMPTP3-201ENST00000569273 224 ntBASIC3.83□□□□□ -1.8
SAMD1Q6SPF0 AC093010.3-201ENST00000570269 15214 ntBASIC3.83□□□□□ -1.8
SAMD1Q6SPF0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
SAMD1Q6SPF0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SAMD1Q6SPF0 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SAMD1Q6SPF0 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SAMD1Q6SPF0 RPL23AP42-201ENST00000471152 471 ntBASIC3.82□□□□□ -1.8
SAMD1Q6SPF0 SNRPGP19-201ENST00000603826 189 ntBASIC3.82□□□□□ -1.8
SAMD1Q6SPF0 RNA5SP126-201ENST00000365092 109 ntBASIC3.81□□□□□ -1.8
SAMD1Q6SPF0 RN7SL863P-201ENST00000462370 296 ntBASIC3.81□□□□□ -1.8
SAMD1Q6SPF0 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.81□□□□□ -1.8
SAMD1Q6SPF0 RNU6-122P-201ENST00000516818 107 ntBASIC3.81□□□□□ -1.8
SAMD1Q6SPF0 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.81□□□□□ -1.8
SAMD1Q6SPF0 GHRLOS.1-201ENST00000610995 70 ntBASIC3.81□□□□□ -1.8
SAMD1Q6SPF0 FO624990.1-201ENST00000636373 85 ntBASIC3.81□□□□□ -1.8
SAMD1Q6SPF0 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.81□□□□□ -1.8
SAMD1Q6SPF0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
SAMD1Q6SPF0 RNA5SP293-201ENST00000410527 113 ntBASIC3.8□□□□□ -1.8
SAMD1Q6SPF0 AP003716.2-201ENST00000528260 108 ntBASIC3.8□□□□□ -1.8
SAMD1Q6SPF0 MIR422A-201ENST00000362286 90 ntBASIC3.79□□□□□ -1.8
SAMD1Q6SPF0 SNORA80A-201ENST00000363922 136 ntBASIC3.79□□□□□ -1.8
SAMD1Q6SPF0 AL133373.1-201ENST00000497098 94 ntBASIC3.79□□□□□ -1.8
SAMD1Q6SPF0 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SAMD1Q6SPF0 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SAMD1Q6SPF0 RNA5SP245-201ENST00000364239 121 ntBASIC3.78□□□□□ -1.8
SAMD1Q6SPF0 RNA5SP270-201ENST00000411361 118 ntBASIC3.78□□□□□ -1.8
SAMD1Q6SPF0 SNORD83.1-201ENST00000411362 77 ntBASIC3.78□□□□□ -1.8
SAMD1Q6SPF0 AL161935.2-201ENST00000414627 60 ntBASIC3.78□□□□□ -1.8
SAMD1Q6SPF0 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC3.78□□□□□ -1.8
SAMD1Q6SPF0 RNU7-24P-201ENST00000458867 62 ntBASIC3.78□□□□□ -1.8
SAMD1Q6SPF0 MIR5004-201ENST00000579078 107 ntBASIC3.78□□□□□ -1.8
SAMD1Q6SPF0 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.78□□□□□ -1.8
SAMD1Q6SPF0 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
SAMD1Q6SPF0 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
SAMD1Q6SPF0 RNU6-495P-201ENST00000362995 107 ntBASIC3.77□□□□□ -1.81
SAMD1Q6SPF0 RNA5SP264-201ENST00000363115 107 ntBASIC3.77□□□□□ -1.81
SAMD1Q6SPF0 S100A11P2-201ENST00000467589 312 ntBASIC3.77□□□□□ -1.81
SAMD1Q6SPF0 RN7SL442P-201ENST00000473804 320 ntBASIC3.77□□□□□ -1.81
SAMD1Q6SPF0 IGLVVI-22-1-201ENST00000521183 211 ntBASIC3.77□□□□□ -1.81
SAMD1Q6SPF0 MIR4446-201ENST00000578505 67 ntBASIC3.77□□□□□ -1.81
SAMD1Q6SPF0 uc_338.1-201ENST00000612113 180 ntBASIC3.77□□□□□ -1.81
SAMD1Q6SPF0 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
SAMD1Q6SPF0 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.76□□□□□ -1.81
SAMD1Q6SPF0 SNORA5B-201ENST00000363786 132 ntBASIC3.76□□□□□ -1.81
SAMD1Q6SPF0 MIR524-201ENST00000385242 87 ntBASIC3.76□□□□□ -1.81
SAMD1Q6SPF0 MIR4658-201ENST00000584344 65 ntBASIC3.76□□□□□ -1.81
SAMD1Q6SPF0 GS1-279B7.1-204ENST00000641809 378 ntBASIC3.76□□□□□ -1.81
SAMD1Q6SPF0 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
SAMD1Q6SPF0 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
SAMD1Q6SPF0 RNU6-535P-201ENST00000384722 107 ntBASIC3.75□□□□□ -1.81
SAMD1Q6SPF0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC3.75□□□□□ -1.81
SAMD1Q6SPF0 RNA5SP450-201ENST00000411206 102 ntBASIC3.75□□□□□ -1.81
SAMD1Q6SPF0 MIR4738-201ENST00000579134 87 ntBASIC3.75□□□□□ -1.81
SAMD1Q6SPF0 MIR4672-201ENST00000583126 81 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 280.5 ms