Protein–RNA interactions for Protein: Q5VTL8

PRPF38B, Pre-mRNA-splicing factor 38B, humanhuman

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38BQ5VTL8 MIR4446-201ENST00000578505 67 ntBASIC2.73□□□□□ -1.97
PRPF38BQ5VTL8 PRELID3BP2-201ENST00000605362 201 ntBASIC2.73□□□□□ -1.97
PRPF38BQ5VTL8 AC067747.1-201ENST00000608026 250 ntBASIC2.73□□□□□ -1.97
PRPF38BQ5VTL8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
PRPF38BQ5VTL8 SNORA6-201ENST00000384033 151 ntBASIC2.72□□□□□ -1.97
PRPF38BQ5VTL8 SNORD41-201ENST00000386967 70 ntBASIC2.72□□□□□ -1.97
PRPF38BQ5VTL8 SNORA17.3-201ENST00000391159 129 ntBASIC2.72□□□□□ -1.97
PRPF38BQ5VTL8 SNORD23.1-201ENST00000408212 104 ntBASIC2.72□□□□□ -1.97
PRPF38BQ5VTL8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.72□□□□□ -1.97
PRPF38BQ5VTL8 AC244023.1-201ENST00000426884 112 ntBASIC2.72□□□□□ -1.97
PRPF38BQ5VTL8 snoU13.2-201ENST00000459201 104 ntBASIC2.72□□□□□ -1.97
PRPF38BQ5VTL8 RPS27P21-201ENST00000486977 252 ntBASIC2.72□□□□□ -1.97
PRPF38BQ5VTL8 RNU6-947P-201ENST00000516264 106 ntBASIC2.72□□□□□ -1.97
PRPF38BQ5VTL8 AC242498.1-201ENST00000604134 111 ntBASIC2.72□□□□□ -1.97
PRPF38BQ5VTL8 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.72□□□□□ -1.97
PRPF38BQ5VTL8 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
PRPF38BQ5VTL8 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.71□□□□□ -1.98
PRPF38BQ5VTL8 RNY1P2-201ENST00000364820 117 ntBASIC2.71□□□□□ -1.98
PRPF38BQ5VTL8 RNU6-396P-201ENST00000365369 105 ntBASIC2.71□□□□□ -1.98
PRPF38BQ5VTL8 RNU4-83P-201ENST00000410863 133 ntBASIC2.71□□□□□ -1.98
PRPF38BQ5VTL8 AL161935.2-201ENST00000414627 60 ntBASIC2.71□□□□□ -1.98
PRPF38BQ5VTL8 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.71□□□□□ -1.98
PRPF38BQ5VTL8 RNU7-85P-201ENST00000458851 63 ntBASIC2.71□□□□□ -1.98
PRPF38BQ5VTL8 MIR4500-201ENST00000579472 76 ntBASIC2.71□□□□□ -1.98
PRPF38BQ5VTL8 AC090897.1-201ENST00000580909 226 ntBASIC2.71□□□□□ -1.98
PRPF38BQ5VTL8 MIR3192-201ENST00000584920 77 ntBASIC2.71□□□□□ -1.98
PRPF38BQ5VTL8 MIR6845-201ENST00000613182 61 ntBASIC2.71□□□□□ -1.98
PRPF38BQ5VTL8 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
PRPF38BQ5VTL8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PRPF38BQ5VTL8 SNORA25.3-201ENST00000363205 127 ntBASIC2.7□□□□□ -1.98
PRPF38BQ5VTL8 SCARNA18B-201ENST00000458806 135 ntBASIC2.7□□□□□ -1.98
PRPF38BQ5VTL8 MIR8066-201ENST00000617280 78 ntBASIC2.7□□□□□ -1.98
PRPF38BQ5VTL8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
PRPF38BQ5VTL8 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
PRPF38BQ5VTL8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PRPF38BQ5VTL8 MIRLET7A1-201ENST00000362295 80 ntBASIC2.69□□□□□ -1.98
PRPF38BQ5VTL8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PRPF38BQ5VTL8 RNU6-557P-201ENST00000516842 110 ntBASIC2.69□□□□□ -1.98
PRPF38BQ5VTL8 MIR3134-201ENST00000579433 74 ntBASIC2.69□□□□□ -1.98
PRPF38BQ5VTL8 AL096861.1-201ENST00000610899 123 ntBASIC2.69□□□□□ -1.98
PRPF38BQ5VTL8 HSPE1P24-201ENST00000450782 238 ntBASIC2.68□□□□□ -1.98
PRPF38BQ5VTL8 U6.109-201ENST00000636749 87 ntBASIC2.68□□□□□ -1.98
PRPF38BQ5VTL8 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRPF38BQ5VTL8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.68□□□□□ -1.98
PRPF38BQ5VTL8 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PRPF38BQ5VTL8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PRPF38BQ5VTL8 snoU13.11-201ENST00000459219 104 ntBASIC2.67□□□□□ -1.98
PRPF38BQ5VTL8 MIR4635-201ENST00000583759 79 ntBASIC2.67□□□□□ -1.98
PRPF38BQ5VTL8 AL512598.1-201ENST00000610158 273 ntBASIC2.67□□□□□ -1.98
PRPF38BQ5VTL8 GHRLOS.1-201ENST00000610995 70 ntBASIC2.67□□□□□ -1.98
PRPF38BQ5VTL8 MIR6504-201ENST00000613520 61 ntBASIC2.67□□□□□ -1.98
PRPF38BQ5VTL8 RMST_2.1-201ENST00000617263 136 ntBASIC2.67□□□□□ -1.98
PRPF38BQ5VTL8 MIR219B-201ENST00000637023 88 ntBASIC2.67□□□□□ -1.98
PRPF38BQ5VTL8 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
PRPF38BQ5VTL8 SNORA63.2-201ENST00000362603 126 ntBASIC2.66□□□□□ -1.98
PRPF38BQ5VTL8 SNORD88.1-201ENST00000408684 91 ntBASIC2.66□□□□□ -1.98
PRPF38BQ5VTL8 MIR1276-201ENST00000408707 83 ntBASIC2.66□□□□□ -1.98
PRPF38BQ5VTL8 RPS29P6-201ENST00000438196 145 ntBASIC2.66□□□□□ -1.98
PRPF38BQ5VTL8 AL049779.4-201ENST00000604500 156 ntBASIC2.66□□□□□ -1.98
PRPF38BQ5VTL8 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
PRPF38BQ5VTL8 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
PRPF38BQ5VTL8 RNU6-686P-201ENST00000364839 107 ntBASIC2.65□□□□□ -1.99
PRPF38BQ5VTL8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
PRPF38BQ5VTL8 RNU6-205P-201ENST00000390858 107 ntBASIC2.65□□□□□ -1.99
PRPF38BQ5VTL8 SNRPGP12-201ENST00000449481 213 ntBASIC2.65□□□□□ -1.99
PRPF38BQ5VTL8 RNU6-539P-201ENST00000516665 103 ntBASIC2.65□□□□□ -1.99
PRPF38BQ5VTL8 AC138749.4-201ENST00000563970 127 ntBASIC2.65□□□□□ -1.99
PRPF38BQ5VTL8 MIR3605-201ENST00000583214 100 ntBASIC2.65□□□□□ -1.99
PRPF38BQ5VTL8 MIR4264-201ENST00000583520 66 ntBASIC2.65□□□□□ -1.99
PRPF38BQ5VTL8 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.65□□□□□ -1.99
PRPF38BQ5VTL8 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
PRPF38BQ5VTL8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
PRPF38BQ5VTL8 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
PRPF38BQ5VTL8 MIR2115-201ENST00000516657 100 ntBASIC2.64□□□□□ -1.99
PRPF38BQ5VTL8 MIR4287-201ENST00000579398 78 ntBASIC2.64□□□□□ -1.99
PRPF38BQ5VTL8 MIR4796-201ENST00000580742 81 ntBASIC2.64□□□□□ -1.99
PRPF38BQ5VTL8 MIR6740-201ENST00000618268 113 ntBASIC2.64□□□□□ -1.99
PRPF38BQ5VTL8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.63□□□□□ -1.99
PRPF38BQ5VTL8 RNU6-1165P-201ENST00000410119 107 ntBASIC2.63□□□□□ -1.99
PRPF38BQ5VTL8 RNU7-62P-201ENST00000458856 62 ntBASIC2.63□□□□□ -1.99
PRPF38BQ5VTL8 Y_RNA.648-201ENST00000459455 110 ntBASIC2.63□□□□□ -1.99
PRPF38BQ5VTL8 RNA5SP220-201ENST00000516298 104 ntBASIC2.63□□□□□ -1.99
PRPF38BQ5VTL8 RNU6-850P-201ENST00000516934 103 ntBASIC2.63□□□□□ -1.99
PRPF38BQ5VTL8 AL773524.1-201ENST00000614065 229 ntBASIC2.63□□□□□ -1.99
PRPF38BQ5VTL8 RNU6-161P-201ENST00000363051 106 ntBASIC2.62□□□□□ -1.99
PRPF38BQ5VTL8 Y_RNA.119-201ENST00000363301 96 ntBASIC2.62□□□□□ -1.99
PRPF38BQ5VTL8 SNORA40.18-201ENST00000391200 128 ntBASIC2.62□□□□□ -1.99
PRPF38BQ5VTL8 MIR1302-7-201ENST00000408841 72 ntBASIC2.62□□□□□ -1.99
PRPF38BQ5VTL8 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.62□□□□□ -1.99
PRPF38BQ5VTL8 AC005908.1-201ENST00000468701 347 ntBASIC2.62□□□□□ -1.99
PRPF38BQ5VTL8 SNORA9.3-201ENST00000516383 129 ntBASIC2.62□□□□□ -1.99
PRPF38BQ5VTL8 AL078603.1-201ENST00000603824 313 ntBASIC2.62□□□□□ -1.99
PRPF38BQ5VTL8 MIR6734-201ENST00000621166 68 ntBASIC2.62□□□□□ -1.99
PRPF38BQ5VTL8 MIR8063-201ENST00000621930 81 ntBASIC2.62□□□□□ -1.99
PRPF38BQ5VTL8 AC010297.1-201ENST00000623948 149 ntBASIC2.62□□□□□ -1.99
PRPF38BQ5VTL8 Y_RNA.532-201ENST00000384590 113 ntBASIC2.61□□□□□ -1.99
PRPF38BQ5VTL8 MIR583-201ENST00000384846 75 ntBASIC2.61□□□□□ -1.99
PRPF38BQ5VTL8 AC244636.1-201ENST00000421152 228 ntBASIC2.61□□□□□ -1.99
PRPF38BQ5VTL8 BX276092.1-201ENST00000427368 251 ntBASIC2.61□□□□□ -1.99
PRPF38BQ5VTL8 AC015688.6-201ENST00000577737 104 ntBASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 617.6 ms