Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
RNFT1Q5M7Z0 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
RNFT1Q5M7Z0 RNU6-1123P-201ENST00000362347 106 ntBASIC2.45□□□□□ -2.02
RNFT1Q5M7Z0 SNORA24B-201ENST00000384176 131 ntBASIC2.45□□□□□ -2.02
RNFT1Q5M7Z0 SNORA40.6-201ENST00000391153 128 ntBASIC2.45□□□□□ -2.02
RNFT1Q5M7Z0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.45□□□□□ -2.02
RNFT1Q5M7Z0 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.45□□□□□ -2.02
RNFT1Q5M7Z0 SNORA9.3-201ENST00000516383 129 ntBASIC2.45□□□□□ -2.02
RNFT1Q5M7Z0 MIR3126-201ENST00000577443 74 ntBASIC2.45□□□□□ -2.02
RNFT1Q5M7Z0 TRDV1-202ENST00000621643 102 ntBASIC2.45□□□□□ -2.02
RNFT1Q5M7Z0 AC016717.2-201ENST00000609089 5141 ntBASIC2.45□□□□□ -2.02
RNFT1Q5M7Z0 ZNF209P-201ENST00000593450 2304 ntBASIC2.45□□□□□ -2.02
RNFT1Q5M7Z0 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RNFT1Q5M7Z0 RNU6-664P-201ENST00000362381 107 ntBASIC2.44□□□□□ -2.02
RNFT1Q5M7Z0 RNU6-829P-201ENST00000363700 112 ntBASIC2.44□□□□□ -2.02
RNFT1Q5M7Z0 RNA5SP68-201ENST00000363885 119 ntBASIC2.44□□□□□ -2.02
RNFT1Q5M7Z0 Y_RNA.236-201ENST00000364427 111 ntBASIC2.44□□□□□ -2.02
RNFT1Q5M7Z0 RNU1-138P-201ENST00000384093 164 ntBASIC2.44□□□□□ -2.02
RNFT1Q5M7Z0 HMGN2P3-201ENST00000433603 273 ntBASIC2.44□□□□□ -2.02
RNFT1Q5M7Z0 HMGN2P5-201ENST00000436882 273 ntBASIC2.44□□□□□ -2.02
RNFT1Q5M7Z0 RPS29P6-201ENST00000438196 145 ntBASIC2.44□□□□□ -2.02
RNFT1Q5M7Z0 RNU6-531P-201ENST00000516694 104 ntBASIC2.44□□□□□ -2.02
RNFT1Q5M7Z0 MIR3140-201ENST00000583685 90 ntBASIC2.44□□□□□ -2.02
RNFT1Q5M7Z0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RNFT1Q5M7Z0 MIR6817-201ENST00000615588 66 ntBASIC2.44□□□□□ -2.02
RNFT1Q5M7Z0 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.44□□□□□ -2.02
RNFT1Q5M7Z0 AC108206.1-201ENST00000570186 4159 ntBASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 RNU6-1260P-201ENST00000362944 107 ntBASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 RNU6-396P-201ENST00000365369 105 ntBASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 RNU6-604P-201ENST00000390917 100 ntBASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 RNA5SP148-201ENST00000516527 94 ntBASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 MIR5089-201ENST00000580047 84 ntBASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 MIR4696-201ENST00000581431 70 ntBASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 RNU7-10P-201ENST00000607194 63 ntBASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 MIR6733-201ENST00000635723 61 ntBASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 FO624990.1-201ENST00000636373 85 ntBASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
RNFT1Q5M7Z0 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.42□□□□□ -2.02
RNFT1Q5M7Z0 MIR26A1-201ENST00000362205 77 ntBASIC2.42□□□□□ -2.02
RNFT1Q5M7Z0 RNA5SP393-201ENST00000363423 117 ntBASIC2.42□□□□□ -2.02
RNFT1Q5M7Z0 RNU6-824P-201ENST00000363724 104 ntBASIC2.42□□□□□ -2.02
RNFT1Q5M7Z0 SNORD101-201ENST00000384027 73 ntBASIC2.42□□□□□ -2.02
RNFT1Q5M7Z0 MIR524-201ENST00000385242 87 ntBASIC2.42□□□□□ -2.02
RNFT1Q5M7Z0 AP004217.1-201ENST00000480579 346 ntBASIC2.42□□□□□ -2.02
RNFT1Q5M7Z0 SNORA31.15-201ENST00000516771 132 ntBASIC2.42□□□□□ -2.02
RNFT1Q5M7Z0 MIR5194-201ENST00000582634 120 ntBASIC2.42□□□□□ -2.02
RNFT1Q5M7Z0 MTRNR2L2-201ENST00000604882 87 ntBASIC2.42□□□□□ -2.02
RNFT1Q5M7Z0 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
RNFT1Q5M7Z0 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
RNFT1Q5M7Z0 SNORA67.1-201ENST00000364749 141 ntBASIC2.41□□□□□ -2.02
RNFT1Q5M7Z0 RNU1-148P-201ENST00000384472 162 ntBASIC2.41□□□□□ -2.02
RNFT1Q5M7Z0 MT-TN-201ENST00000387400 73 ntBASIC2.41□□□□□ -2.02
RNFT1Q5M7Z0 SNORD100-201ENST00000408573 76 ntBASIC2.41□□□□□ -2.02
RNFT1Q5M7Z0 RNU7-195P-201ENST00000458793 62 ntBASIC2.41□□□□□ -2.02
RNFT1Q5M7Z0 RNU6-752P-201ENST00000516376 102 ntBASIC2.41□□□□□ -2.02
RNFT1Q5M7Z0 MIR4491-201ENST00000581087 68 ntBASIC2.41□□□□□ -2.02
RNFT1Q5M7Z0 AP000942.3-201ENST00000603702 160 ntBASIC2.41□□□□□ -2.02
RNFT1Q5M7Z0 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
RNFT1Q5M7Z0 RNU1-91P-201ENST00000364746 163 ntBASIC2.4□□□□□ -2.03
RNFT1Q5M7Z0 Y_RNA.536-201ENST00000384621 113 ntBASIC2.4□□□□□ -2.03
RNFT1Q5M7Z0 MIR518A2-201ENST00000384966 87 ntBASIC2.4□□□□□ -2.03
RNFT1Q5M7Z0 MIR1302-7-201ENST00000408841 72 ntBASIC2.4□□□□□ -2.03
RNFT1Q5M7Z0 AL606490.4-201ENST00000423117 127 ntBASIC2.4□□□□□ -2.03
RNFT1Q5M7Z0 AL513328.1-201ENST00000446460 224 ntBASIC2.4□□□□□ -2.03
RNFT1Q5M7Z0 TRAJ51-201ENST00000504127 63 ntBASIC2.4□□□□□ -2.03
RNFT1Q5M7Z0 SNORD111.1-201ENST00000516421 86 ntBASIC2.4□□□□□ -2.03
RNFT1Q5M7Z0 SNORA25.16-201ENST00000516741 121 ntBASIC2.4□□□□□ -2.03
RNFT1Q5M7Z0 MIR548H5-201ENST00000580314 60 ntBASIC2.4□□□□□ -2.03
RNFT1Q5M7Z0 MIR3945-201ENST00000581853 98 ntBASIC2.4□□□□□ -2.03
RNFT1Q5M7Z0 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.4□□□□□ -2.03
RNFT1Q5M7Z0 AC245884.12-201ENST00000615364 59 ntBASIC2.4□□□□□ -2.03
RNFT1Q5M7Z0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
RNFT1Q5M7Z0 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
RNFT1Q5M7Z0 U8.13-201ENST00000390842 128 ntBASIC2.39□□□□□ -2.03
RNFT1Q5M7Z0 Y_RNA.588-201ENST00000391254 102 ntBASIC2.39□□□□□ -2.03
RNFT1Q5M7Z0 SNORD88.1-201ENST00000408684 91 ntBASIC2.39□□□□□ -2.03
RNFT1Q5M7Z0 Y_RNA.809-201ENST00000516058 95 ntBASIC2.39□□□□□ -2.03
RNFT1Q5M7Z0 MIR3605-201ENST00000583214 100 ntBASIC2.39□□□□□ -2.03
RNFT1Q5M7Z0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
RNFT1Q5M7Z0 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
RNFT1Q5M7Z0 AP006437.1-201ENST00000641440 3685 ntBASIC2.38□□□□□ -2.03
RNFT1Q5M7Z0 RNU6-1187P-201ENST00000364771 110 ntBASIC2.38□□□□□ -2.03
RNFT1Q5M7Z0 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.38□□□□□ -2.03
RNFT1Q5M7Z0 RNU6-935P-201ENST00000410371 100 ntBASIC2.38□□□□□ -2.03
RNFT1Q5M7Z0 RNA5SP501-201ENST00000410990 112 ntBASIC2.38□□□□□ -2.03
RNFT1Q5M7Z0 RNU7-62P-201ENST00000458856 62 ntBASIC2.38□□□□□ -2.03
RNFT1Q5M7Z0 RPL30P7-201ENST00000479312 323 ntBASIC2.38□□□□□ -2.03
RNFT1Q5M7Z0 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.38□□□□□ -2.03
RNFT1Q5M7Z0 RNU6-360P-201ENST00000390944 104 ntBASIC2.37□□□□□ -2.03
RNFT1Q5M7Z0 AL691482.2-201ENST00000457453 84 ntBASIC2.37□□□□□ -2.03
RNFT1Q5M7Z0 RNA5SP282-201ENST00000516355 108 ntBASIC2.37□□□□□ -2.03
RNFT1Q5M7Z0 MIR2115-201ENST00000516657 100 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 247.7 ms