Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 RNU4-43P-201ENST00000410628 137 ntBASIC-0.59□□□□□ -2.5
ZNF404Q494X3 AC097635.1-201ENST00000450678 155 ntBASIC-0.59□□□□□ -2.5
ZNF404Q494X3 RNU7-113P-201ENST00000459273 62 ntBASIC-0.59□□□□□ -2.5
ZNF404Q494X3 AC082651.2-201ENST00000496833 166 ntBASIC-0.59□□□□□ -2.5
ZNF404Q494X3 SERF1AP1-201ENST00000514575 187 ntBASIC-0.59□□□□□ -2.5
ZNF404Q494X3 SNORD67.1-201ENST00000516618 108 ntBASIC-0.59□□□□□ -2.5
ZNF404Q494X3 AL590491.3-201ENST00000610731 82 ntBASIC-0.59□□□□□ -2.5
ZNF404Q494X3 RN7SL660P-201ENST00000614852 299 ntBASIC-0.59□□□□□ -2.5
ZNF404Q494X3 AC090971.5-201ENST00000621102 293 ntBASIC-0.59□□□□□ -2.5
ZNF404Q494X3 Y_RNA.117-201ENST00000363294 101 ntBASIC-0.6□□□□□ -2.51
ZNF404Q494X3 RNU6-770P-201ENST00000363929 105 ntBASIC-0.6□□□□□ -2.51
ZNF404Q494X3 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.6□□□□□ -2.51
ZNF404Q494X3 RNU6-728P-201ENST00000365375 104 ntBASIC-0.6□□□□□ -2.51
ZNF404Q494X3 Y_RNA.356-201ENST00000365475 113 ntBASIC-0.6□□□□□ -2.51
ZNF404Q494X3 SNORA32-201ENST00000384072 121 ntBASIC-0.6□□□□□ -2.51
ZNF404Q494X3 MIR635-201ENST00000384830 98 ntBASIC-0.6□□□□□ -2.51
ZNF404Q494X3 Y_RNA.619-201ENST00000410951 90 ntBASIC-0.6□□□□□ -2.51
ZNF404Q494X3 MTND4LP11-201ENST00000422184 280 ntBASIC-0.6□□□□□ -2.51
ZNF404Q494X3 RNU6-561P-201ENST00000516222 102 ntBASIC-0.6□□□□□ -2.51
ZNF404Q494X3 RNY3P15-201ENST00000516297 97 ntBASIC-0.6□□□□□ -2.51
ZNF404Q494X3 RNA5SP33-201ENST00000516687 98 ntBASIC-0.6□□□□□ -2.51
ZNF404Q494X3 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.6□□□□□ -2.51
ZNF404Q494X3 Y_RNA.721-201ENST00000517207 102 ntBASIC-0.6□□□□□ -2.51
ZNF404Q494X3 AL359881.1-201ENST00000602916 267 ntBASIC-0.6□□□□□ -2.51
ZNF404Q494X3 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.6□□□□□ -2.51
ZNF404Q494X3 Y_RNA.19-201ENST00000362462 99 ntBASIC-0.61□□□□□ -2.51
ZNF404Q494X3 Y_RNA.31-201ENST00000362574 102 ntBASIC-0.61□□□□□ -2.51
ZNF404Q494X3 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.61□□□□□ -2.51
ZNF404Q494X3 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.61□□□□□ -2.51
ZNF404Q494X3 RNY1P6-201ENST00000384193 109 ntBASIC-0.61□□□□□ -2.51
ZNF404Q494X3 TRAJ51-201ENST00000504127 63 ntBASIC-0.61□□□□□ -2.51
ZNF404Q494X3 MIR3920-201ENST00000581751 86 ntBASIC-0.61□□□□□ -2.51
ZNF404Q494X3 AC105081.1-201ENST00000617727 106 ntBASIC-0.61□□□□□ -2.51
ZNF404Q494X3 RNA5SP98-201ENST00000363158 137 ntBASIC-0.62□□□□□ -2.51
ZNF404Q494X3 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.62□□□□□ -2.51
ZNF404Q494X3 RNU6-978P-201ENST00000364371 103 ntBASIC-0.62□□□□□ -2.51
ZNF404Q494X3 U8.6-201ENST00000364939 135 ntBASIC-0.62□□□□□ -2.51
ZNF404Q494X3 Y_RNA.395-201ENST00000383945 109 ntBASIC-0.62□□□□□ -2.51
ZNF404Q494X3 MIR624-201ENST00000385217 97 ntBASIC-0.62□□□□□ -2.51
ZNF404Q494X3 AL022718.1-201ENST00000412004 84 ntBASIC-0.62□□□□□ -2.51
ZNF404Q494X3 ELOCP20-201ENST00000422460 345 ntBASIC-0.62□□□□□ -2.51
ZNF404Q494X3 RBMX2P4-201ENST00000441256 376 ntBASIC-0.62□□□□□ -2.51
ZNF404Q494X3 RPS29P8-201ENST00000445109 171 ntBASIC-0.62□□□□□ -2.51
ZNF404Q494X3 SNORD2.1-201ENST00000458762 69 ntBASIC-0.62□□□□□ -2.51
ZNF404Q494X3 RNU7-74P-201ENST00000459104 62 ntBASIC-0.62□□□□□ -2.51
ZNF404Q494X3 SNORD116-25-201ENST00000516517 92 ntBASIC-0.62□□□□□ -2.51
ZNF404Q494X3 SCARNA24.2-201ENST00000516968 130 ntBASIC-0.62□□□□□ -2.51
ZNF404Q494X3 SNORD114-11-201ENST00000363738 75 ntBASIC-0.63□□□□□ -2.51
ZNF404Q494X3 Y_RNA.214-201ENST00000364201 112 ntBASIC-0.63□□□□□ -2.51
ZNF404Q494X3 MIR519A1-201ENST00000385257 85 ntBASIC-0.63□□□□□ -2.51
ZNF404Q494X3 RNU6-381P-201ENST00000391259 108 ntBASIC-0.63□□□□□ -2.51
ZNF404Q494X3 AC139792.2-201ENST00000624218 587 ntBASIC-0.63□□□□□ -2.51
ZNF404Q494X3 Y_RNA.263-201ENST00000364659 114 ntBASIC-0.64□□□□□ -2.51
ZNF404Q494X3 Y_RNA.274-201ENST00000364714 101 ntBASIC-0.64□□□□□ -2.51
ZNF404Q494X3 Y_RNA.276-201ENST00000364732 109 ntBASIC-0.64□□□□□ -2.51
ZNF404Q494X3 RNU6-806P-201ENST00000365147 105 ntBASIC-0.64□□□□□ -2.51
ZNF404Q494X3 RNU6-35P-201ENST00000384530 107 ntBASIC-0.64□□□□□ -2.51
ZNF404Q494X3 RNU6-1338P-201ENST00000516328 91 ntBASIC-0.64□□□□□ -2.51
ZNF404Q494X3 RNU6-875P-201ENST00000516488 106 ntBASIC-0.64□□□□□ -2.51
ZNF404Q494X3 MIR4432-201ENST00000581823 84 ntBASIC-0.64□□□□□ -2.51
ZNF404Q494X3 MIR548AE2-201ENST00000583456 67 ntBASIC-0.64□□□□□ -2.51
ZNF404Q494X3 AC006504.6-201ENST00000590142 199 ntBASIC-0.64□□□□□ -2.51
ZNF404Q494X3 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-0.64□□□□□ -2.51
ZNF404Q494X3 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.65□□□□□ -2.51
ZNF404Q494X3 Y_RNA.84-201ENST00000363011 104 ntBASIC-0.65□□□□□ -2.51
ZNF404Q494X3 RNU1-141P-201ENST00000364623 158 ntBASIC-0.65□□□□□ -2.51
ZNF404Q494X3 SNORD75.1-201ENST00000408373 60 ntBASIC-0.65□□□□□ -2.51
ZNF404Q494X3 RNA5SP451-201ENST00000410588 110 ntBASIC-0.65□□□□□ -2.51
ZNF404Q494X3 AC114755.3-201ENST00000481111 251 ntBASIC-0.65□□□□□ -2.51
ZNF404Q494X3 RNU6-1143P-201ENST00000516125 104 ntBASIC-0.65□□□□□ -2.51
ZNF404Q494X3 AL391099.1-201ENST00000624635 187 ntBASIC-0.65□□□□□ -2.51
ZNF404Q494X3 MIR369-201ENST00000362155 70 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 Y_RNA.26-201ENST00000362539 101 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 Y_RNA.44-201ENST00000362676 108 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 Y_RNA.82-201ENST00000363000 102 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 Y_RNA.92-201ENST00000363043 102 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 Y_RNA.210-201ENST00000364161 110 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 Y_RNA.235-201ENST00000364412 102 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 Y_RNA.306-201ENST00000365015 102 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 Y_RNA.312-201ENST00000365089 102 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 Y_RNA.322-201ENST00000365151 102 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 MIR604-201ENST00000384880 94 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 MIR181B2-201ENST00000385004 89 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 RNU6-1009P-201ENST00000390996 107 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 AL603914.1-201ENST00000401964 204 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 MIR548I2-201ENST00000408348 149 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 AC113618.1-201ENST00000416747 285 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 Y_RNA.650-201ENST00000459002 102 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 RNU7-13P-201ENST00000516413 62 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 RNA5SP395-201ENST00000516567 118 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 Y_RNA.777-201ENST00000516982 102 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 RNU7-188P-201ENST00000517063 64 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 MTND5P40-201ENST00000559945 246 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 Y_RNA.771-201ENST00000598668 102 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 Y_RNA.789-201ENST00000622480 102 ntBASIC-0.66□□□□□ -2.52
ZNF404Q494X3 Y_RNA.64-201ENST00000362845 102 ntBASIC-0.67□□□□□ -2.52
ZNF404Q494X3 RNU4-84P-201ENST00000364200 139 ntBASIC-0.67□□□□□ -2.52
ZNF404Q494X3 SNORA25.7-201ENST00000364375 127 ntBASIC-0.67□□□□□ -2.52
ZNF404Q494X3 RNU4-17P-201ENST00000365598 141 ntBASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms