Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 MIR376B-201ENST00000614515 100 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 FGF7P2-201ENST00000332473 296 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU6-79P-201ENST00000362511 107 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 Y_RNA.153-201ENST00000363615 91 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 SNORD113-7-201ENST00000363762 77 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 SNORD27-201ENST00000363981 72 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU6-801P-201ENST00000364087 105 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU6-99P-201ENST00000364721 107 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU6-157P-201ENST00000383957 107 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 Y_RNA.448-201ENST00000384185 108 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU6-588P-201ENST00000410281 105 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU2-72P-201ENST00000411175 163 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 MTCO2P19-201ENST00000427513 598 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 AC090616.4-201ENST00000448026 115 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 PCMTD1P1-201ENST00000455560 355 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU6-719P-201ENST00000516671 104 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 RNU6-1191P-201ENST00000516799 107 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 MIR4703-201ENST00000577728 79 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 AC097639.2-201ENST00000603159 172 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 SNX3P1Y-201ENST00000615757 176 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 MIR376A1-201ENST00000616574 68 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 AC073534.2-201ENST00000620377 381 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 snoR1.1-201ENST00000628177 80 ntBASIC-0.63□□□□□ -2.51
ABCA4P78363 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 RNU6-664P-201ENST00000362381 107 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 SNORA63.2-201ENST00000362603 126 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 RNU6-280P-201ENST00000364145 104 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 RNU4-75P-201ENST00000364621 146 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 Y_RNA.529-201ENST00000384586 119 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 MIR519A2-201ENST00000384990 87 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 MT-TI-201ENST00000387365 69 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 RNU6-243P-201ENST00000391140 107 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 RNU6-648P-201ENST00000410190 107 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 RNA5SP261-201ENST00000410536 106 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 RNU7-24P-201ENST00000458867 62 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 SERF1AP1-201ENST00000514575 187 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 RNU7-115P-201ENST00000516433 55 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 AC009779.6-201ENST00000603972 165 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 SNORD58B-201ENST00000607313 66 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 RNU6-170P-201ENST00000362832 104 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 RNU6-899P-201ENST00000363947 107 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 SNORD114-4-201ENST00000363962 75 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 RNU6-704P-201ENST00000364162 103 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 RNU6-312P-201ENST00000364629 107 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 RNU6-472P-201ENST00000384299 107 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 RNY3P14-201ENST00000384309 102 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 Y_RNA.511-201ENST00000384514 103 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 MIR216B-201ENST00000390186 82 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-0.64□□□□□ -2.51
ABCA4P78363 RNU7-74P-201ENST00000459104 62 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.64□□□□□ -2.51
ABCA4P78363 RNA5SP236-201ENST00000516169 116 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 RNU6-126P-201ENST00000516685 103 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-0.64□□□□□ -2.51
ABCA4P78363 FRG2DP-202ENST00000566967 323 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 AC060780.3-201ENST00000589464 80 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 AC006006.1-201ENST00000603082 144 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 U6.92-201ENST00000636464 89 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 AC099654.14-201ENST00000638599 341 ntBASIC-0.64□□□□□ -2.51
ABCA4P78363 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-0.65□□□□□ -2.51
ABCA4P78363 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 RNU6-595P-201ENST00000363944 107 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 RNU6-694P-201ENST00000364071 147 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 Y_RNA.357-201ENST00000365487 109 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 Y_RNA.405-201ENST00000383979 100 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 SNORD101-201ENST00000384027 73 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 SNORA32-201ENST00000384072 121 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 Y_RNA.451-201ENST00000384200 100 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 Y_RNA.524-201ENST00000384564 100 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 RNU6-83P-201ENST00000384568 112 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 Y_RNA.561-201ENST00000384694 100 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 RNU6-1158P-201ENST00000391167 107 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 SNORD19-201ENST00000391191 68 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 RNU6-192P-201ENST00000391253 100 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 RNU6-1086P-201ENST00000410930 100 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 RNU6-1068P-201ENST00000410958 103 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 RNU6-651P-201ENST00000411040 105 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 RNU7-167P-201ENST00000459160 62 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 SEPT14P4-201ENST00000513445 186 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 RNU7-154P-201ENST00000516194 62 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.65□□□□□ -2.51
ABCA4P78363 MIR4724-201ENST00000579485 89 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 MIR3657-201ENST00000584818 117 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 AC108081.1-201ENST00000604358 221 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 AC013791.1-201ENST00000616619 62 ntBASIC-0.65□□□□□ -2.51
ABCA4P78363 UBE2WP1-201ENST00000362030 340 ntBASIC-0.66□□□□□ -2.51
ABCA4P78363 RNU6-832P-201ENST00000363319 107 ntBASIC-0.66□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 276.1 ms