Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 MIR5194-201ENST00000582634 120 ntBASIC2.62□□□□□ -1.99
USP46P62068 AC245884.12-201ENST00000615364 59 ntBASIC2.62□□□□□ -1.99
USP46P62068 Y_RNA.788-201ENST00000622394 112 ntBASIC2.62□□□□□ -1.99
USP46P62068 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
USP46P62068 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
USP46P62068 MIR103A2-201ENST00000362154 78 ntBASIC2.61□□□□□ -1.99
USP46P62068 MIRLET7A1-201ENST00000362295 80 ntBASIC2.61□□□□□ -1.99
USP46P62068 RNU4-58P-201ENST00000363192 141 ntBASIC2.61□□□□□ -1.99
USP46P62068 Y_RNA.283-201ENST00000364798 112 ntBASIC2.61□□□□□ -1.99
USP46P62068 SNORA25.9-201ENST00000365087 128 ntBASIC2.61□□□□□ -1.99
USP46P62068 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
USP46P62068 RNA5SP95-201ENST00000410319 137 ntBASIC2.61□□□□□ -1.99
USP46P62068 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.61□□□□□ -1.99
USP46P62068 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.61□□□□□ -1.99
USP46P62068 RNU6-557P-201ENST00000516842 110 ntBASIC2.61□□□□□ -1.99
USP46P62068 AC121758.2-201ENST00000553271 193 ntBASIC2.61□□□□□ -1.99
USP46P62068 MIR4491-201ENST00000581087 68 ntBASIC2.61□□□□□ -1.99
USP46P62068 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.61□□□□□ -1.99
USP46P62068 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
USP46P62068 RNU6-403P-201ENST00000363163 104 ntBASIC2.6□□□□□ -1.99
USP46P62068 MIR524-201ENST00000385242 87 ntBASIC2.6□□□□□ -1.99
USP46P62068 AC008413.1-201ENST00000511864 177 ntBASIC2.6□□□□□ -1.99
USP46P62068 RNA5SP82-201ENST00000516707 92 ntBASIC2.6□□□□□ -1.99
USP46P62068 RNU6-654P-201ENST00000364373 107 ntBASIC2.59□□□□□ -1.99
USP46P62068 RNU6-132P-201ENST00000383863 107 ntBASIC2.59□□□□□ -1.99
USP46P62068 RNU7-106P-201ENST00000459514 67 ntBASIC2.59□□□□□ -1.99
USP46P62068 AC004223.1-201ENST00000479840 271 ntBASIC2.59□□□□□ -1.99
USP46P62068 AL133373.1-201ENST00000497098 94 ntBASIC2.59□□□□□ -1.99
USP46P62068 RNU6-250P-201ENST00000516958 103 ntBASIC2.59□□□□□ -1.99
USP46P62068 MIR4435-1-201ENST00000582552 80 ntBASIC2.59□□□□□ -1.99
USP46P62068 MIR8063-201ENST00000621930 81 ntBASIC2.59□□□□□ -1.99
USP46P62068 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.59□□□□□ -2
USP46P62068 RNA5SP456-201ENST00000364002 114 ntBASIC2.58□□□□□ -2
USP46P62068 MIR548U-201ENST00000390728 81 ntBASIC2.58□□□□□ -2
USP46P62068 AL359511.1-201ENST00000402970 211 ntBASIC2.58□□□□□ -2
USP46P62068 MIR1185-1-201ENST00000408598 86 ntBASIC2.58□□□□□ -2
USP46P62068 RNA5SP508-201ENST00000411327 119 ntBASIC2.58□□□□□ -2
USP46P62068 FGF7P7-201ENST00000514120 227 ntBASIC2.58□□□□□ -2
USP46P62068 SNORA77B-201ENST00000578179 125 ntBASIC2.58□□□□□ -2
USP46P62068 AC104996.3-201ENST00000590718 94 ntBASIC2.58□□□□□ -2
USP46P62068 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USP46P62068 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
USP46P62068 SNORD114-30-201ENST00000364448 72 ntBASIC2.57□□□□□ -2
USP46P62068 SNORD63B-201ENST00000411005 70 ntBASIC2.57□□□□□ -2
USP46P62068 SCARNA18B-201ENST00000458806 135 ntBASIC2.57□□□□□ -2
USP46P62068 Y_RNA.660-201ENST00000516002 120 ntBASIC2.57□□□□□ -2
USP46P62068 MIR3064-201ENST00000581130 66 ntBASIC2.57□□□□□ -2
USP46P62068 SNORD92-201ENST00000585078 85 ntBASIC2.57□□□□□ -2
USP46P62068 MIR8074-201ENST00000615081 81 ntBASIC2.57□□□□□ -2
USP46P62068 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
USP46P62068 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.56□□□□□ -2
USP46P62068 AL596028.1-201ENST00000326971 197 ntBASIC2.56□□□□□ -2
USP46P62068 MIRLET7F1-201ENST00000362202 87 ntBASIC2.56□□□□□ -2
USP46P62068 Y_RNA.491-201ENST00000384417 107 ntBASIC2.56□□□□□ -2
USP46P62068 RNU6-75P-201ENST00000515944 104 ntBASIC2.56□□□□□ -2
USP46P62068 MIR4287-201ENST00000579398 78 ntBASIC2.56□□□□□ -2
USP46P62068 MIR5092-201ENST00000583139 88 ntBASIC2.56□□□□□ -2
USP46P62068 AC046143.2-201ENST00000609789 160 ntBASIC2.56□□□□□ -2
USP46P62068 AL773524.1-201ENST00000614065 229 ntBASIC2.56□□□□□ -2
USP46P62068 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
USP46P62068 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
USP46P62068 RNA5SP264-201ENST00000363115 107 ntBASIC2.55□□□□□ -2
USP46P62068 RNU6-957P-201ENST00000363652 99 ntBASIC2.55□□□□□ -2
USP46P62068 Y_RNA.588-201ENST00000391254 102 ntBASIC2.55□□□□□ -2
USP46P62068 AC244636.1-201ENST00000421152 228 ntBASIC2.55□□□□□ -2
USP46P62068 RNU11-2P-201ENST00000516898 142 ntBASIC2.55□□□□□ -2
USP46P62068 MIR3134-201ENST00000579433 74 ntBASIC2.55□□□□□ -2
USP46P62068 SNORD53-201ENST00000579969 78 ntBASIC2.55□□□□□ -2
USP46P62068 MIR3945-201ENST00000581853 98 ntBASIC2.55□□□□□ -2
USP46P62068 MIR4484-201ENST00000582855 83 ntBASIC2.55□□□□□ -2
USP46P62068 SNRPGP19-201ENST00000603826 189 ntBASIC2.55□□□□□ -2
USP46P62068 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
USP46P62068 MIR377-201ENST00000362145 69 ntBASIC2.54□□□□□ -2
USP46P62068 SNORA16B-201ENST00000364674 135 ntBASIC2.54□□□□□ -2
USP46P62068 RNU1-36P-201ENST00000365130 165 ntBASIC2.54□□□□□ -2
USP46P62068 MIR635-201ENST00000384830 98 ntBASIC2.54□□□□□ -2
USP46P62068 AP003716.2-201ENST00000528260 108 ntBASIC2.54□□□□□ -2
USP46P62068 MIR101-2-201ENST00000362195 79 ntBASIC2.53□□□□□ -2
USP46P62068 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.53□□□□□ -2
USP46P62068 SNORA3.2-201ENST00000408221 125 ntBASIC2.53□□□□□ -2
USP46P62068 AC114801.3-201ENST00000510231 177 ntBASIC2.53□□□□□ -2
USP46P62068 AC026436.1-201ENST00000510537 270 ntBASIC2.53□□□□□ -2
USP46P62068 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.53□□□□□ -2.01
USP46P62068 SNORD77.2-201ENST00000391045 68 ntBASIC2.52□□□□□ -2.01
USP46P62068 RNU4-53P-201ENST00000410828 140 ntBASIC2.52□□□□□ -2.01
USP46P62068 AC015818.7-201ENST00000428754 109 ntBASIC2.52□□□□□ -2.01
USP46P62068 MIR18B-201ENST00000454574 71 ntBASIC2.52□□□□□ -2.01
USP46P62068 AC023934.1-201ENST00000574529 2389 ntBASIC2.52□□□□□ -2.01
USP46P62068 SNORD100-201ENST00000408573 76 ntBASIC2.51□□□□□ -2.01
USP46P62068 RNU1-41P-201ENST00000516161 162 ntBASIC2.51□□□□□ -2.01
USP46P62068 RNU1-48P-201ENST00000516400 162 ntBASIC2.51□□□□□ -2.01
USP46P62068 RNA5SP24-201ENST00000516478 95 ntBASIC2.51□□□□□ -2.01
USP46P62068 AC019176.1-201ENST00000518519 225 ntBASIC2.51□□□□□ -2.01
USP46P62068 MIR1291-201ENST00000627649 87 ntBASIC2.51□□□□□ -2.01
USP46P62068 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
USP46P62068 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
USP46P62068 AC016717.2-201ENST00000609089 5141 ntBASIC2.51□□□□□ -2.01
USP46P62068 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.5□□□□□ -2.01
USP46P62068 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
USP46P62068 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 192 ms