Protein–RNA interactions for Protein: P60608

ERVFC1-1, Endogenous retrovirus group FC1 member 1 Env polyprotein, humanhuman

Predictions only

Length 527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1-1P60608 RNU6-1054P-201ENST00000411293 104 ntBASIC1.12□□□□□ -2.23
ERVFC1-1P60608 RNA5SP61-201ENST00000516453 100 ntBASIC1.12□□□□□ -2.23
ERVFC1-1P60608 RNU6-1018P-201ENST00000516577 106 ntBASIC1.12□□□□□ -2.23
ERVFC1-1P60608 RNA5SP170-201ENST00000517150 101 ntBASIC1.12□□□□□ -2.23
ERVFC1-1P60608 snoU13.31-201ENST00000607291 104 ntBASIC1.12□□□□□ -2.23
ERVFC1-1P60608 AL512598.1-201ENST00000610158 273 ntBASIC1.12□□□□□ -2.23
ERVFC1-1P60608 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.12□□□□□ -2.23
ERVFC1-1P60608 AC105081.1-201ENST00000617727 106 ntBASIC1.12□□□□□ -2.23
ERVFC1-1P60608 Y_RNA.818-201ENST00000618813 71 ntBASIC1.12□□□□□ -2.23
ERVFC1-1P60608 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.11□□□□□ -2.23
ERVFC1-1P60608 RNU6-1313P-201ENST00000362622 102 ntBASIC1.11□□□□□ -2.23
ERVFC1-1P60608 SNORD114-10-201ENST00000363409 72 ntBASIC1.11□□□□□ -2.23
ERVFC1-1P60608 Y_RNA.363-201ENST00000365529 113 ntBASIC1.11□□□□□ -2.23
ERVFC1-1P60608 Y_RNA.448-201ENST00000384185 108 ntBASIC1.11□□□□□ -2.23
ERVFC1-1P60608 Y_RNA.544-201ENST00000384650 113 ntBASIC1.11□□□□□ -2.23
ERVFC1-1P60608 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.11□□□□□ -2.23
ERVFC1-1P60608 RNA5SP237-201ENST00000410414 113 ntBASIC1.11□□□□□ -2.23
ERVFC1-1P60608 RN7SKP88-201ENST00000516847 250 ntBASIC1.11□□□□□ -2.23
ERVFC1-1P60608 RNU6-1006P-201ENST00000516998 103 ntBASIC1.11□□□□□ -2.23
ERVFC1-1P60608 RNU6-902P-201ENST00000517212 91 ntBASIC1.11□□□□□ -2.23
ERVFC1-1P60608 MIR4498-201ENST00000577599 66 ntBASIC1.11□□□□□ -2.23
ERVFC1-1P60608 MIR4255-201ENST00000579351 72 ntBASIC1.11□□□□□ -2.23
ERVFC1-1P60608 AP000753.3-201ENST00000604083 169 ntBASIC1.11□□□□□ -2.23
ERVFC1-1P60608 7SK.8-201ENST00000612110 250 ntBASIC1.11□□□□□ -2.23
ERVFC1-1P60608 7SK.11-201ENST00000615477 250 ntBASIC1.11□□□□□ -2.23
ERVFC1-1P60608 7SK.13-201ENST00000622040 250 ntBASIC1.11□□□□□ -2.23
ERVFC1-1P60608 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.11□□□□□ -2.23
ERVFC1-1P60608 MIR377-201ENST00000362145 69 ntBASIC1.1□□□□□ -2.23
ERVFC1-1P60608 RNU4-36P-201ENST00000364294 144 ntBASIC1.1□□□□□ -2.23
ERVFC1-1P60608 Y_RNA.247-201ENST00000364500 92 ntBASIC1.1□□□□□ -2.23
ERVFC1-1P60608 RNU6-580P-201ENST00000365159 107 ntBASIC1.1□□□□□ -2.23
ERVFC1-1P60608 Y_RNA.377-201ENST00000365644 108 ntBASIC1.1□□□□□ -2.23
ERVFC1-1P60608 RNU6-949P-201ENST00000384040 107 ntBASIC1.1□□□□□ -2.23
ERVFC1-1P60608 MIR34C-201ENST00000384831 77 ntBASIC1.1□□□□□ -2.23
ERVFC1-1P60608 Y_RNA.601-201ENST00000410500 113 ntBASIC1.1□□□□□ -2.23
ERVFC1-1P60608 AC096949.1-201ENST00000412047 152 ntBASIC1.1□□□□□ -2.23
ERVFC1-1P60608 RNU7-62P-201ENST00000458856 62 ntBASIC1.1□□□□□ -2.23
ERVFC1-1P60608 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.1□□□□□ -2.23
ERVFC1-1P60608 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.1□□□□□ -2.23
ERVFC1-1P60608 AC091304.10-201ENST00000641554 121 ntBASIC1.1□□□□□ -2.23
ERVFC1-1P60608 Y_RNA.466-201ENST00000384294 113 ntBASIC1.09□□□□□ -2.23
ERVFC1-1P60608 SNORA67.6-201ENST00000391093 99 ntBASIC1.09□□□□□ -2.23
ERVFC1-1P60608 SNORA75.2-201ENST00000391138 150 ntBASIC1.09□□□□□ -2.23
ERVFC1-1P60608 SNORA75.3-201ENST00000391231 150 ntBASIC1.09□□□□□ -2.23
ERVFC1-1P60608 RNU6-1165P-201ENST00000410119 107 ntBASIC1.09□□□□□ -2.23
ERVFC1-1P60608 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.09□□□□□ -2.23
ERVFC1-1P60608 SNORA31.2-201ENST00000516019 134 ntBASIC1.09□□□□□ -2.23
ERVFC1-1P60608 SCARNA23-201ENST00000516060 130 ntBASIC1.09□□□□□ -2.23
ERVFC1-1P60608 Y_RNA.694-201ENST00000516677 117 ntBASIC1.09□□□□□ -2.23
ERVFC1-1P60608 RNU1-92P-201ENST00000517017 135 ntBASIC1.09□□□□□ -2.23
ERVFC1-1P60608 MIR548Z-201ENST00000584743 97 ntBASIC1.09□□□□□ -2.23
ERVFC1-1P60608 MIR376B-201ENST00000614515 100 ntBASIC1.09□□□□□ -2.23
ERVFC1-1P60608 AL442128.1-201ENST00000615151 90 ntBASIC1.09□□□□□ -2.23
ERVFC1-1P60608 AC012531.4-201ENST00000616509 177 ntBASIC1.09□□□□□ -2.23
ERVFC1-1P60608 AL512310.12-203ENST00000640543 90 ntBASIC1.09□□□□□ -2.23
ERVFC1-1P60608 Y_RNA.43-201ENST00000362670 111 ntBASIC1.08□□□□□ -2.24
ERVFC1-1P60608 MIR517C-201ENST00000385103 95 ntBASIC1.08□□□□□ -2.24
ERVFC1-1P60608 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.08□□□□□ -2.24
ERVFC1-1P60608 U8.15-201ENST00000390947 134 ntBASIC1.08□□□□□ -2.24
ERVFC1-1P60608 MTATP8P2-201ENST00000435212 202 ntBASIC1.08□□□□□ -2.24
ERVFC1-1P60608 RNU6-795P-201ENST00000516323 103 ntBASIC1.08□□□□□ -2.24
ERVFC1-1P60608 SNORA40.13-201ENST00000516379 120 ntBASIC1.08□□□□□ -2.24
ERVFC1-1P60608 RNU6-158P-201ENST00000517104 100 ntBASIC1.08□□□□□ -2.24
ERVFC1-1P60608 MIR5582-201ENST00000579697 68 ntBASIC1.08□□□□□ -2.24
ERVFC1-1P60608 SEPT14P17-201ENST00000617978 177 ntBASIC1.08□□□□□ -2.24
ERVFC1-1P60608 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
ERVFC1-1P60608 RNU6-170P-201ENST00000362832 104 ntBASIC1.07□□□□□ -2.24
ERVFC1-1P60608 Y_RNA.93-201ENST00000363066 109 ntBASIC1.07□□□□□ -2.24
ERVFC1-1P60608 RNU6-1255P-201ENST00000363434 112 ntBASIC1.07□□□□□ -2.24
ERVFC1-1P60608 MIR488-201ENST00000365739 83 ntBASIC1.07□□□□□ -2.24
ERVFC1-1P60608 MIR758-201ENST00000390227 88 ntBASIC1.07□□□□□ -2.24
ERVFC1-1P60608 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.07□□□□□ -2.24
ERVFC1-1P60608 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.07□□□□□ -2.24
ERVFC1-1P60608 RNU7-48P-201ENST00000458875 63 ntBASIC1.07□□□□□ -2.24
ERVFC1-1P60608 snoU13.21-201ENST00000459368 105 ntBASIC1.07□□□□□ -2.24
ERVFC1-1P60608 SNORA4-201ENST00000584302 138 ntBASIC1.07□□□□□ -2.24
ERVFC1-1P60608 Y_RNA.107-201ENST00000363190 121 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 RNY1P10-201ENST00000363268 113 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 Y_RNA.164-201ENST00000363709 102 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 Y_RNA.168-201ENST00000363740 102 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 RNU6-865P-201ENST00000364772 107 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
ERVFC1-1P60608 SNORA17.3-201ENST00000391159 129 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 RNY4P30-201ENST00000410216 95 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 RNU6-447P-201ENST00000410293 104 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 RNU6-1118P-201ENST00000410382 104 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 RNU6-1076P-201ENST00000410397 104 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 RNU6-355P-201ENST00000410427 104 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 RNU6-791P-201ENST00000410467 104 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 RNU6-705P-201ENST00000410601 104 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 RNU6-1100P-201ENST00000410691 104 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 RNU6-860P-201ENST00000410860 104 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 RNU6-1217P-201ENST00000411276 104 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 RNU6-785P-201ENST00000411324 104 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 BTF3P4-201ENST00000418852 495 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 MRPL35P3-201ENST00000421557 364 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 AL354695.1-201ENST00000427935 228 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 SNORA31.24-201ENST00000517232 57 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 AC036111.3-201ENST00000526389 112 ntBASIC1.06□□□□□ -2.24
ERVFC1-1P60608 MIR4777-201ENST00000583710 86 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 170.4 ms