Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 RNU7-123P-201ENST00000515911 60 ntBASIC0.66□□□□□ -2.3
RIPK4P57078 RNU6-229P-201ENST00000516614 102 ntBASIC0.66□□□□□ -2.3
RIPK4P57078 AP001328.1-201ENST00000528550 176 ntBASIC0.66□□□□□ -2.3
RIPK4P57078 AC022523.2-201ENST00000561045 150 ntBASIC0.66□□□□□ -2.3
RIPK4P57078 MIR1273G-201ENST00000577677 100 ntBASIC0.66□□□□□ -2.3
RIPK4P57078 MIR3152-201ENST00000579801 74 ntBASIC0.66□□□□□ -2.3
RIPK4P57078 MIR4305-201ENST00000583252 102 ntBASIC0.66□□□□□ -2.3
RIPK4P57078 AP000753.3-201ENST00000604083 169 ntBASIC0.66□□□□□ -2.3
RIPK4P57078 MIR377-201ENST00000362145 69 ntBASIC0.65□□□□□ -2.31
RIPK4P57078 RNU6-235P-201ENST00000362644 107 ntBASIC0.65□□□□□ -2.31
RIPK4P57078 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.65□□□□□ -2.31
RIPK4P57078 RNU6-1165P-201ENST00000410119 107 ntBASIC0.65□□□□□ -2.31
RIPK4P57078 RNA5SP193-201ENST00000410353 107 ntBASIC0.65□□□□□ -2.31
RIPK4P57078 RPS26P5-201ENST00000418544 335 ntBASIC0.65□□□□□ -2.31
RIPK4P57078 RNU6-781P-201ENST00000516377 101 ntBASIC0.65□□□□□ -2.31
RIPK4P57078 AC133485.4-201ENST00000561835 220 ntBASIC0.65□□□□□ -2.31
RIPK4P57078 AC138907.4-201ENST00000570107 226 ntBASIC0.65□□□□□ -2.31
RIPK4P57078 AC021443.1-201ENST00000604478 211 ntBASIC0.65□□□□□ -2.31
RIPK4P57078 AL353765.1-201ENST00000605514 183 ntBASIC0.65□□□□□ -2.31
RIPK4P57078 AC011603.4-201ENST00000611325 277 ntBASIC0.65□□□□□ -2.31
RIPK4P57078 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
RIPK4P57078 SNORD115-2-201ENST00000362842 82 ntBASIC0.64□□□□□ -2.31
RIPK4P57078 Y_RNA.298-201ENST00000364960 107 ntBASIC0.64□□□□□ -2.31
RIPK4P57078 SNORD115-20-201ENST00000365099 82 ntBASIC0.64□□□□□ -2.31
RIPK4P57078 RNU6-934P-201ENST00000365154 107 ntBASIC0.64□□□□□ -2.31
RIPK4P57078 SNORA18-201ENST00000384416 132 ntBASIC0.64□□□□□ -2.31
RIPK4P57078 Y_RNA.531-201ENST00000384589 121 ntBASIC0.64□□□□□ -2.31
RIPK4P57078 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.64□□□□□ -2.31
RIPK4P57078 MTATP6P21-201ENST00000440681 189 ntBASIC0.64□□□□□ -2.31
RIPK4P57078 AL158147.1-201ENST00000443970 75 ntBASIC0.64□□□□□ -2.31
RIPK4P57078 RNU7-164P-201ENST00000459221 62 ntBASIC0.64□□□□□ -2.31
RIPK4P57078 Y_RNA.692-201ENST00000516627 105 ntBASIC0.64□□□□□ -2.31
RIPK4P57078 Y_RNA.703-201ENST00000516846 111 ntBASIC0.64□□□□□ -2.31
RIPK4P57078 RNU6-971P-201ENST00000516920 106 ntBASIC0.64□□□□□ -2.31
RIPK4P57078 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.64□□□□□ -2.31
RIPK4P57078 AL137067.1-201ENST00000615933 120 ntBASIC0.64□□□□□ -2.31
RIPK4P57078 uc_338.17-201ENST00000619633 179 ntBASIC0.64□□□□□ -2.31
RIPK4P57078 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.63□□□□□ -2.31
RIPK4P57078 RNY1P13-201ENST00000365030 105 ntBASIC0.63□□□□□ -2.31
RIPK4P57078 U8.15-201ENST00000390947 134 ntBASIC0.63□□□□□ -2.31
RIPK4P57078 SNORD89-201ENST00000390981 114 ntBASIC0.63□□□□□ -2.31
RIPK4P57078 RNA5SP261-201ENST00000410536 106 ntBASIC0.63□□□□□ -2.31
RIPK4P57078 RNU6-735P-201ENST00000410612 107 ntBASIC0.63□□□□□ -2.31
RIPK4P57078 Y_RNA.617-201ENST00000410920 90 ntBASIC0.63□□□□□ -2.31
RIPK4P57078 Y_RNA.630-201ENST00000411370 108 ntBASIC0.63□□□□□ -2.31
RIPK4P57078 RN7SKP19-201ENST00000516016 252 ntBASIC0.63□□□□□ -2.31
RIPK4P57078 RNU6-1110P-201ENST00000516462 101 ntBASIC0.63□□□□□ -2.31
RIPK4P57078 RNY4P20-201ENST00000516678 93 ntBASIC0.63□□□□□ -2.31
RIPK4P57078 RNA5SP33-201ENST00000516687 98 ntBASIC0.63□□□□□ -2.31
RIPK4P57078 RNU6-1234P-201ENST00000516877 103 ntBASIC0.63□□□□□ -2.31
RIPK4P57078 MIR548AE2-201ENST00000583456 67 ntBASIC0.63□□□□□ -2.31
RIPK4P57078 AL662814.1-201ENST00000617364 121 ntBASIC0.63□□□□□ -2.31
RIPK4P57078 RNU6-704P-201ENST00000364162 103 ntBASIC0.62□□□□□ -2.31
RIPK4P57078 Y_RNA.343-201ENST00000365354 112 ntBASIC0.62□□□□□ -2.31
RIPK4P57078 SNORA32-201ENST00000384072 121 ntBASIC0.62□□□□□ -2.31
RIPK4P57078 RNU6-110P-201ENST00000384508 104 ntBASIC0.62□□□□□ -2.31
RIPK4P57078 SNORA40-201ENST00000388090 126 ntBASIC0.62□□□□□ -2.31
RIPK4P57078 RNU7-107P-201ENST00000459121 61 ntBASIC0.62□□□□□ -2.31
RIPK4P57078 RNU6-1211P-201ENST00000459179 105 ntBASIC0.62□□□□□ -2.31
RIPK4P57078 RNU7-113P-201ENST00000459273 62 ntBASIC0.62□□□□□ -2.31
RIPK4P57078 AC141846.1-201ENST00000568348 142 ntBASIC0.62□□□□□ -2.31
RIPK4P57078 MIR4771-2-201ENST00000577758 74 ntBASIC0.62□□□□□ -2.31
RIPK4P57078 MIR4711-201ENST00000578274 70 ntBASIC0.62□□□□□ -2.31
RIPK4P57078 AC025627.3-201ENST00000582078 182 ntBASIC0.62□□□□□ -2.31
RIPK4P57078 MIR4771-1-201ENST00000582617 74 ntBASIC0.62□□□□□ -2.31
RIPK4P57078 AL359881.1-201ENST00000602916 267 ntBASIC0.62□□□□□ -2.31
RIPK4P57078 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.62□□□□□ -2.31
RIPK4P57078 SNORD114-23-201ENST00000363536 72 ntBASIC0.61□□□□□ -2.31
RIPK4P57078 Y_RNA.218-201ENST00000364218 104 ntBASIC0.61□□□□□ -2.31
RIPK4P57078 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
RIPK4P57078 MIR548M-201ENST00000408260 86 ntBASIC0.61□□□□□ -2.31
RIPK4P57078 AL022718.1-201ENST00000412004 84 ntBASIC0.61□□□□□ -2.31
RIPK4P57078 RNU7-185P-201ENST00000459215 60 ntBASIC0.61□□□□□ -2.31
RIPK4P57078 RNU7-79P-201ENST00000516082 62 ntBASIC0.61□□□□□ -2.31
RIPK4P57078 RNU7-35P-201ENST00000517174 62 ntBASIC0.61□□□□□ -2.31
RIPK4P57078 MIR4676-201ENST00000583078 72 ntBASIC0.61□□□□□ -2.31
RIPK4P57078 AC008608.1-201ENST00000603910 127 ntBASIC0.61□□□□□ -2.31
RIPK4P57078 U7.2-201ENST00000607576 63 ntBASIC0.61□□□□□ -2.31
RIPK4P57078 AL589743.1-201ENST00000551932 2712 ntBASIC0.61□□□□□ -2.31
RIPK4P57078 MIRLET7F2-201ENST00000385277 83 ntBASIC0.6□□□□□ -2.31
RIPK4P57078 MIR1263-201ENST00000408324 86 ntBASIC0.6□□□□□ -2.31
RIPK4P57078 MIR1827-201ENST00000408549 66 ntBASIC0.6□□□□□ -2.31
RIPK4P57078 RNU6-994P-201ENST00000410507 111 ntBASIC0.6□□□□□ -2.31
RIPK4P57078 AC114737.2-201ENST00000421583 173 ntBASIC0.6□□□□□ -2.31
RIPK4P57078 MIR18B-201ENST00000454574 71 ntBASIC0.6□□□□□ -2.31
RIPK4P57078 RNU7-56P-201ENST00000458744 62 ntBASIC0.6□□□□□ -2.31
RIPK4P57078 COX6CP6-201ENST00000490840 228 ntBASIC0.6□□□□□ -2.31
RIPK4P57078 MIR4804-201ENST00000581683 73 ntBASIC0.6□□□□□ -2.31
RIPK4P57078 Y_RNA.115-201ENST00000363272 98 ntBASIC0.59□□□□□ -2.31
RIPK4P57078 SNORD50.2-201ENST00000365465 70 ntBASIC0.59□□□□□ -2.31
RIPK4P57078 RNU6-949P-201ENST00000384040 107 ntBASIC0.59□□□□□ -2.31
RIPK4P57078 RNU6-1307P-201ENST00000391012 103 ntBASIC0.59□□□□□ -2.31
RIPK4P57078 Y_RNA.588-201ENST00000391254 102 ntBASIC0.59□□□□□ -2.31
RIPK4P57078 RNU6-1086P-201ENST00000410930 100 ntBASIC0.59□□□□□ -2.31
RIPK4P57078 Y_RNA.773-201ENST00000607168 90 ntBASIC0.59□□□□□ -2.31
RIPK4P57078 AC087741.2-201ENST00000619415 172 ntBASIC0.59□□□□□ -2.31
RIPK4P57078 TUG1_4.1-201ENST00000619464 181 ntBASIC0.59□□□□□ -2.31
RIPK4P57078 AC243829.3-201ENST00000622177 108 ntBASIC0.59□□□□□ -2.31
RIPK4P57078 MIR1-1-201ENST00000362147 71 ntBASIC0.58□□□□□ -2.32
RIPK4P57078 Y_RNA.71-201ENST00000362892 104 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms