Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 Y_RNA.601-201ENST00000410500 113 ntBASIC1.59□□□□□ -2.15
GFRA1P56159 Y_RNA.677-201ENST00000516401 85 ntBASIC1.59□□□□□ -2.15
GFRA1P56159 AL442128.1-201ENST00000615151 90 ntBASIC1.59□□□□□ -2.15
GFRA1P56159 Y_RNA.363-201ENST00000365529 113 ntBASIC1.58□□□□□ -2.16
GFRA1P56159 RNU6-482P-201ENST00000391068 107 ntBASIC1.58□□□□□ -2.16
GFRA1P56159 RPS29P28-201ENST00000446439 141 ntBASIC1.58□□□□□ -2.16
GFRA1P56159 SCARNA23-201ENST00000516060 130 ntBASIC1.58□□□□□ -2.16
GFRA1P56159 uc_338.6-201ENST00000613544 171 ntBASIC1.58□□□□□ -2.16
GFRA1P56159 AL353997.5-201ENST00000618886 171 ntBASIC1.58□□□□□ -2.16
GFRA1P56159 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
GFRA1P56159 RNU6-1307P-201ENST00000391012 103 ntBASIC1.57□□□□□ -2.16
GFRA1P56159 RNU7-90P-201ENST00000459216 62 ntBASIC1.57□□□□□ -2.16
GFRA1P56159 RNU7-21P-201ENST00000459430 62 ntBASIC1.57□□□□□ -2.16
GFRA1P56159 SNORA70.22-201ENST00000517160 124 ntBASIC1.57□□□□□ -2.16
GFRA1P56159 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.57□□□□□ -2.16
GFRA1P56159 MIR4419B-201ENST00000577260 68 ntBASIC1.57□□□□□ -2.16
GFRA1P56159 AP001362.1-201ENST00000625165 124 ntBASIC1.57□□□□□ -2.16
GFRA1P56159 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
GFRA1P56159 RNA5SP99-201ENST00000364020 114 ntBASIC1.56□□□□□ -2.16
GFRA1P56159 SNORD45B-201ENST00000364617 72 ntBASIC1.56□□□□□ -2.16
GFRA1P56159 SNORD38.2-201ENST00000384470 69 ntBASIC1.56□□□□□ -2.16
GFRA1P56159 SNORD111-201ENST00000408139 94 ntBASIC1.56□□□□□ -2.16
GFRA1P56159 SNORA40.13-201ENST00000516379 120 ntBASIC1.56□□□□□ -2.16
GFRA1P56159 SNORA25.15-201ENST00000516487 89 ntBASIC1.56□□□□□ -2.16
GFRA1P56159 AC036111.3-201ENST00000526389 112 ntBASIC1.56□□□□□ -2.16
GFRA1P56159 MIR8081-201ENST00000611533 95 ntBASIC1.56□□□□□ -2.16
GFRA1P56159 MIR376B-201ENST00000614515 100 ntBASIC1.56□□□□□ -2.16
GFRA1P56159 AP001318.4-201ENST00000616637 121 ntBASIC1.56□□□□□ -2.16
GFRA1P56159 RNU1-17P-201ENST00000363022 152 ntBASIC1.55□□□□□ -2.16
GFRA1P56159 Y_RNA.107-201ENST00000363190 121 ntBASIC1.55□□□□□ -2.16
GFRA1P56159 MIR34C-201ENST00000384831 77 ntBASIC1.55□□□□□ -2.16
GFRA1P56159 MIR222-201ENST00000384992 110 ntBASIC1.55□□□□□ -2.16
GFRA1P56159 U8.15-201ENST00000390947 134 ntBASIC1.55□□□□□ -2.16
GFRA1P56159 Y_RNA.659-201ENST00000515994 113 ntBASIC1.55□□□□□ -2.16
GFRA1P56159 SNORD79.1-201ENST00000516069 84 ntBASIC1.55□□□□□ -2.16
GFRA1P56159 RNU6-109P-201ENST00000516364 107 ntBASIC1.55□□□□□ -2.16
GFRA1P56159 RNU6-184P-201ENST00000516514 107 ntBASIC1.55□□□□□ -2.16
GFRA1P56159 AC023827.1-201ENST00000569247 97 ntBASIC1.55□□□□□ -2.16
GFRA1P56159 AC106800.4-201ENST00000614905 153 ntBASIC1.55□□□□□ -2.16
GFRA1P56159 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
GFRA1P56159 SNORD38.1-201ENST00000363863 68 ntBASIC1.54□□□□□ -2.16
GFRA1P56159 RNY1P2-201ENST00000364820 117 ntBASIC1.54□□□□□ -2.16
GFRA1P56159 RNA5SP190-201ENST00000365222 118 ntBASIC1.54□□□□□ -2.16
GFRA1P56159 SNORD12-201ENST00000391002 90 ntBASIC1.54□□□□□ -2.16
GFRA1P56159 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.54□□□□□ -2.16
GFRA1P56159 UBL5P1-201ENST00000507979 193 ntBASIC1.54□□□□□ -2.16
GFRA1P56159 Y_RNA.93-201ENST00000363066 109 ntBASIC1.53□□□□□ -2.16
GFRA1P56159 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.53□□□□□ -2.16
GFRA1P56159 MIR1257-201ENST00000408490 117 ntBASIC1.53□□□□□ -2.16
GFRA1P56159 SNORD93-201ENST00000408813 74 ntBASIC1.53□□□□□ -2.16
GFRA1P56159 RNU6-970P-201ENST00000516312 107 ntBASIC1.53□□□□□ -2.16
GFRA1P56159 RNU6-158P-201ENST00000517104 100 ntBASIC1.53□□□□□ -2.16
GFRA1P56159 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.53□□□□□ -2.16
GFRA1P56159 MIR2052-201ENST00000636055 55 ntBASIC1.53□□□□□ -2.16
GFRA1P56159 U6.109-201ENST00000636749 87 ntBASIC1.53□□□□□ -2.16
GFRA1P56159 AC023934.1-201ENST00000574529 2389 ntBASIC1.52□□□□□ -2.17
GFRA1P56159 AC008163.1-202ENST00000636004 2889 ntBASIC1.52□□□□□ -2.17
GFRA1P56159 SNORD48-201ENST00000364953 64 ntBASIC1.52□□□□□ -2.17
GFRA1P56159 RNU6-934P-201ENST00000365154 107 ntBASIC1.52□□□□□ -2.17
GFRA1P56159 RNU6-53P-201ENST00000365367 106 ntBASIC1.52□□□□□ -2.17
GFRA1P56159 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.52□□□□□ -2.17
GFRA1P56159 RNU6-994P-201ENST00000410507 111 ntBASIC1.52□□□□□ -2.17
GFRA1P56159 SNORD83.1-201ENST00000411362 77 ntBASIC1.52□□□□□ -2.17
GFRA1P56159 MIR3122-201ENST00000577243 73 ntBASIC1.52□□□□□ -2.17
GFRA1P56159 MIR502-201ENST00000606349 86 ntBASIC1.52□□□□□ -2.17
GFRA1P56159 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
GFRA1P56159 RNA5SP133-201ENST00000363368 119 ntBASIC1.51□□□□□ -2.17
GFRA1P56159 Y_RNA.348-201ENST00000365403 103 ntBASIC1.51□□□□□ -2.17
GFRA1P56159 SNORD13-201ENST00000459299 104 ntBASIC1.51□□□□□ -2.17
GFRA1P56159 snoU13.21-201ENST00000459368 105 ntBASIC1.51□□□□□ -2.17
GFRA1P56159 Y_RNA.694-201ENST00000516677 117 ntBASIC1.51□□□□□ -2.17
GFRA1P56159 RNU6-1006P-201ENST00000516998 103 ntBASIC1.51□□□□□ -2.17
GFRA1P56159 AC138749.4-201ENST00000563970 127 ntBASIC1.51□□□□□ -2.17
GFRA1P56159 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.51□□□□□ -2.17
GFRA1P56159 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
GFRA1P56159 RNU6-170P-201ENST00000362832 104 ntBASIC1.5□□□□□ -2.17
GFRA1P56159 Y_RNA.96-201ENST00000363092 109 ntBASIC1.5□□□□□ -2.17
GFRA1P56159 RNU1-36P-201ENST00000365130 165 ntBASIC1.5□□□□□ -2.17
GFRA1P56159 SNORA17.3-201ENST00000391159 129 ntBASIC1.5□□□□□ -2.17
GFRA1P56159 RNU7-185P-201ENST00000459215 60 ntBASIC1.5□□□□□ -2.17
GFRA1P56159 MIR4771-2-201ENST00000577758 74 ntBASIC1.5□□□□□ -2.17
GFRA1P56159 MIR4771-1-201ENST00000582617 74 ntBASIC1.5□□□□□ -2.17
GFRA1P56159 Y_RNA.140-201ENST00000363474 103 ntBASIC1.49□□□□□ -2.17
GFRA1P56159 SNORA25-201ENST00000384384 134 ntBASIC1.49□□□□□ -2.17
GFRA1P56159 AC004941.2-201ENST00000427009 228 ntBASIC1.49□□□□□ -2.17
GFRA1P56159 RNA5SP458-201ENST00000516188 119 ntBASIC1.49□□□□□ -2.17
GFRA1P56159 MTND5P40-201ENST00000559945 246 ntBASIC1.49□□□□□ -2.17
GFRA1P56159 MIR4439-201ENST00000583746 80 ntBASIC1.49□□□□□ -2.17
GFRA1P56159 RNU6-90P-201ENST00000606352 106 ntBASIC1.49□□□□□ -2.17
GFRA1P56159 Y_RNA.95-201ENST00000363079 95 ntBASIC1.48□□□□□ -2.17
GFRA1P56159 RNU6-403P-201ENST00000363163 104 ntBASIC1.48□□□□□ -2.17
GFRA1P56159 Y_RNA.247-201ENST00000364500 92 ntBASIC1.48□□□□□ -2.17
GFRA1P56159 RNU6-905P-201ENST00000384434 107 ntBASIC1.48□□□□□ -2.17
GFRA1P56159 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
GFRA1P56159 MIR548G-201ENST00000408442 89 ntBASIC1.48□□□□□ -2.17
GFRA1P56159 AC096949.1-201ENST00000412047 152 ntBASIC1.48□□□□□ -2.17
GFRA1P56159 MTATP8P2-201ENST00000435212 202 ntBASIC1.48□□□□□ -2.17
GFRA1P56159 SPINT5P-201ENST00000448174 155 ntBASIC1.48□□□□□ -2.17
GFRA1P56159 RNU6-795P-201ENST00000516323 103 ntBASIC1.48□□□□□ -2.17
GFRA1P56159 RNA5SP170-201ENST00000517150 101 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 203.9 ms