Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
EPHB3P54753 SNORD38B-201ENST00000384690 67 ntBASIC1.97□□□□□ -2.09
EPHB3P54753 RNA5SP458-201ENST00000516188 119 ntBASIC1.97□□□□□ -2.09
EPHB3P54753 RNU6-65P-201ENST00000516332 98 ntBASIC1.97□□□□□ -2.09
EPHB3P54753 MIR4448-201ENST00000584360 86 ntBASIC1.97□□□□□ -2.09
EPHB3P54753 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.97□□□□□ -2.09
EPHB3P54753 SNORD38B-202ENST00000625943 69 ntBASIC1.97□□□□□ -2.09
EPHB3P54753 AP000553.5-201ENST00000641933 54 ntBASIC1.97□□□□□ -2.09
EPHB3P54753 AL359851.1-201ENST00000569460 4997 ntBASIC1.97□□□□□ -2.09
EPHB3P54753 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
EPHB3P54753 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
EPHB3P54753 RNU1-17P-201ENST00000363022 152 ntBASIC1.96□□□□□ -2.1
EPHB3P54753 RNA5SP138-201ENST00000365098 114 ntBASIC1.96□□□□□ -2.1
EPHB3P54753 RNU6-203P-201ENST00000384038 104 ntBASIC1.96□□□□□ -2.1
EPHB3P54753 RNU6-480P-201ENST00000384332 107 ntBASIC1.96□□□□□ -2.1
EPHB3P54753 SNORA2B-201ENST00000384583 137 ntBASIC1.96□□□□□ -2.1
EPHB3P54753 AC003989.2-201ENST00000440224 169 ntBASIC1.96□□□□□ -2.1
EPHB3P54753 RNU7-41P-201ENST00000515917 61 ntBASIC1.96□□□□□ -2.1
EPHB3P54753 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.96□□□□□ -2.1
EPHB3P54753 AC141846.1-201ENST00000568348 142 ntBASIC1.96□□□□□ -2.1
EPHB3P54753 MIR3935-201ENST00000583472 104 ntBASIC1.96□□□□□ -2.1
EPHB3P54753 AL096840.1-201ENST00000603287 93 ntBASIC1.96□□□□□ -2.1
EPHB3P54753 MIR4662A-201ENST00000637499 67 ntBASIC1.96□□□□□ -2.1
EPHB3P54753 AP000648.3-201ENST00000623539 4507 ntBASIC1.96□□□□□ -2.1
EPHB3P54753 Y_RNA.94-201ENST00000363068 106 ntBASIC1.95□□□□□ -2.1
EPHB3P54753 RNA5SP133-201ENST00000363368 119 ntBASIC1.95□□□□□ -2.1
EPHB3P54753 MIR181B2-201ENST00000385004 89 ntBASIC1.95□□□□□ -2.1
EPHB3P54753 AC004965.1-201ENST00000413033 213 ntBASIC1.95□□□□□ -2.1
EPHB3P54753 RNU6-322P-201ENST00000516010 103 ntBASIC1.95□□□□□ -2.1
EPHB3P54753 MTND5P40-201ENST00000559945 246 ntBASIC1.95□□□□□ -2.1
EPHB3P54753 AL662814.1-201ENST00000617364 121 ntBASIC1.95□□□□□ -2.1
EPHB3P54753 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.95□□□□□ -2.1
EPHB3P54753 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
EPHB3P54753 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
EPHB3P54753 RNA5SP48-201ENST00000363969 126 ntBASIC1.94□□□□□ -2.1
EPHB3P54753 RNU6-776P-201ENST00000364403 104 ntBASIC1.94□□□□□ -2.1
EPHB3P54753 RNU6-1022P-201ENST00000365049 104 ntBASIC1.94□□□□□ -2.1
EPHB3P54753 RNU6-524P-201ENST00000384270 107 ntBASIC1.94□□□□□ -2.1
EPHB3P54753 MIR519C-201ENST00000385053 87 ntBASIC1.94□□□□□ -2.1
EPHB3P54753 AL161935.2-201ENST00000414627 60 ntBASIC1.94□□□□□ -2.1
EPHB3P54753 AL603825.1-201ENST00000438481 80 ntBASIC1.94□□□□□ -2.1
EPHB3P54753 SNORA25.15-201ENST00000516487 89 ntBASIC1.94□□□□□ -2.1
EPHB3P54753 AC084768.2-201ENST00000622736 221 ntBASIC1.94□□□□□ -2.1
EPHB3P54753 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.93□□□□□ -2.1
EPHB3P54753 RNY1P2-201ENST00000364820 117 ntBASIC1.93□□□□□ -2.1
EPHB3P54753 RNU6-1237P-201ENST00000384777 107 ntBASIC1.93□□□□□ -2.1
EPHB3P54753 AC009474.2-201ENST00000451383 136 ntBASIC1.93□□□□□ -2.1
EPHB3P54753 AC093729.1-201ENST00000513074 128 ntBASIC1.93□□□□□ -2.1
EPHB3P54753 MIR4712-201ENST00000583750 82 ntBASIC1.93□□□□□ -2.1
EPHB3P54753 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.93□□□□□ -2.1
EPHB3P54753 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
EPHB3P54753 WWP1P1-201ENST00000466609 2769 ntBASIC1.92□□□□□ -2.1
EPHB3P54753 RNU6-949P-201ENST00000384040 107 ntBASIC1.92□□□□□ -2.1
EPHB3P54753 MIR9-3-201ENST00000385084 90 ntBASIC1.92□□□□□ -2.1
EPHB3P54753 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
EPHB3P54753 RNA5SP237-201ENST00000410414 113 ntBASIC1.92□□□□□ -2.1
EPHB3P54753 RNU6-717P-201ENST00000459076 104 ntBASIC1.92□□□□□ -2.1
EPHB3P54753 RPS29P11-201ENST00000496507 171 ntBASIC1.92□□□□□ -2.1
EPHB3P54753 SNORD111.1-201ENST00000516421 86 ntBASIC1.92□□□□□ -2.1
EPHB3P54753 AC133485.1-201ENST00000567176 124 ntBASIC1.92□□□□□ -2.1
EPHB3P54753 AC140658.3-201ENST00000567603 271 ntBASIC1.92□□□□□ -2.1
EPHB3P54753 MIR4713-201ENST00000582691 75 ntBASIC1.92□□□□□ -2.1
EPHB3P54753 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.92□□□□□ -2.1
EPHB3P54753 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
EPHB3P54753 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
EPHB3P54753 AC087499.7-201ENST00000441958 109 ntBASIC1.91□□□□□ -2.1
EPHB3P54753 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.91□□□□□ -2.1
EPHB3P54753 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
EPHB3P54753 Y_RNA.168-201ENST00000363740 102 ntBASIC1.9□□□□□ -2.11
EPHB3P54753 MIR563-201ENST00000385080 79 ntBASIC1.9□□□□□ -2.11
EPHB3P54753 AC244023.1-201ENST00000426884 112 ntBASIC1.9□□□□□ -2.11
EPHB3P54753 SNRPGP12-201ENST00000449481 213 ntBASIC1.9□□□□□ -2.11
EPHB3P54753 snoU13.2-201ENST00000459201 104 ntBASIC1.9□□□□□ -2.11
EPHB3P54753 RNA5SP445-201ENST00000515889 115 ntBASIC1.9□□□□□ -2.11
EPHB3P54753 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.9□□□□□ -2.11
EPHB3P54753 AP000942.3-201ENST00000603702 160 ntBASIC1.9□□□□□ -2.11
EPHB3P54753 AP000753.3-201ENST00000604083 169 ntBASIC1.9□□□□□ -2.11
EPHB3P54753 AC242498.1-201ENST00000604134 111 ntBASIC1.9□□□□□ -2.11
EPHB3P54753 RNA5SP190-201ENST00000365222 118 ntBASIC1.89□□□□□ -2.11
EPHB3P54753 SNORD41-201ENST00000386967 70 ntBASIC1.89□□□□□ -2.11
EPHB3P54753 RNU6-519P-201ENST00000410590 108 ntBASIC1.89□□□□□ -2.11
EPHB3P54753 RNU6-250P-201ENST00000516958 103 ntBASIC1.89□□□□□ -2.11
EPHB3P54753 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.89□□□□□ -2.11
EPHB3P54753 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.89□□□□□ -2.11
EPHB3P54753 MIR8081-201ENST00000611533 95 ntBASIC1.89□□□□□ -2.11
EPHB3P54753 uc_338.20-201ENST00000621563 178 ntBASIC1.89□□□□□ -2.11
EPHB3P54753 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
EPHB3P54753 SNORD115-37-201ENST00000363768 82 ntBASIC1.88□□□□□ -2.11
EPHB3P54753 SNORA16.1-201ENST00000364597 132 ntBASIC1.88□□□□□ -2.11
EPHB3P54753 MIR513A1-201ENST00000385138 129 ntBASIC1.88□□□□□ -2.11
EPHB3P54753 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
EPHB3P54753 AC073261.1-201ENST00000429409 121 ntBASIC1.88□□□□□ -2.11
EPHB3P54753 AC027119.1-201ENST00000440877 241 ntBASIC1.88□□□□□ -2.11
EPHB3P54753 AC138749.4-201ENST00000563970 127 ntBASIC1.88□□□□□ -2.11
EPHB3P54753 AC090897.1-201ENST00000580909 226 ntBASIC1.88□□□□□ -2.11
EPHB3P54753 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.88□□□□□ -2.11
EPHB3P54753 PRELID3BP2-201ENST00000605362 201 ntBASIC1.88□□□□□ -2.11
EPHB3P54753 MIR8066-201ENST00000617280 78 ntBASIC1.88□□□□□ -2.11
EPHB3P54753 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
EPHB3P54753 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms