Protein–RNA interactions for Protein: P52701

MSH6, DNA mismatch repair protein Msh6, humanhuman

Predictions only

Length 1,360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6P52701 RNA5SP245-201ENST00000364239 121 ntBASIC-0.09□□□□□ -2.42
MSH6P52701 Y_RNA.262-201ENST00000364641 102 ntBASIC-0.09□□□□□ -2.42
MSH6P52701 RNU4-17P-201ENST00000365598 141 ntBASIC-0.09□□□□□ -2.42
MSH6P52701 MIR624-201ENST00000385217 97 ntBASIC-0.09□□□□□ -2.42
MSH6P52701 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
MSH6P52701 RNU6-127P-201ENST00000390897 107 ntBASIC-0.09□□□□□ -2.42
MSH6P52701 RNA5SP128-201ENST00000365305 116 ntBASIC-0.1□□□□□ -2.43
MSH6P52701 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.1□□□□□ -2.43
MSH6P52701 MIR610-201ENST00000385139 96 ntBASIC-0.1□□□□□ -2.43
MSH6P52701 MTCYBP6-201ENST00000441810 138 ntBASIC-0.1□□□□□ -2.43
MSH6P52701 AL121914.1-201ENST00000450188 156 ntBASIC-0.1□□□□□ -2.43
MSH6P52701 Y_RNA.660-201ENST00000516002 120 ntBASIC-0.1□□□□□ -2.43
MSH6P52701 RNU7-35P-201ENST00000517174 62 ntBASIC-0.1□□□□□ -2.43
MSH6P52701 MIR4643-201ENST00000577473 78 ntBASIC-0.1□□□□□ -2.43
MSH6P52701 AP001094.1-201ENST00000579805 193 ntBASIC-0.1□□□□□ -2.43
MSH6P52701 AC011921.3-201ENST00000605540 361 ntBASIC-0.1□□□□□ -2.43
MSH6P52701 Y_RNA.171-201ENST00000363760 102 ntBASIC-0.11□□□□□ -2.43
MSH6P52701 RNU6-639P-201ENST00000384074 107 ntBASIC-0.11□□□□□ -2.43
MSH6P52701 MIR760-201ENST00000390220 80 ntBASIC-0.11□□□□□ -2.43
MSH6P52701 RNU6-531P-201ENST00000516694 104 ntBASIC-0.11□□□□□ -2.43
MSH6P52701 RNU4-58P-201ENST00000363192 141 ntBASIC-0.12□□□□□ -2.43
MSH6P52701 RNU6-867P-201ENST00000364956 107 ntBASIC-0.12□□□□□ -2.43
MSH6P52701 Y_RNA.512-201ENST00000384518 102 ntBASIC-0.12□□□□□ -2.43
MSH6P52701 RNU6-713P-201ENST00000384761 107 ntBASIC-0.12□□□□□ -2.43
MSH6P52701 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.12□□□□□ -2.43
MSH6P52701 MT-TW-201ENST00000387382 68 ntBASIC-0.12□□□□□ -2.43
MSH6P52701 HMGN2P22-201ENST00000427588 175 ntBASIC-0.12□□□□□ -2.43
MSH6P52701 RPL39P34-201ENST00000477141 156 ntBASIC-0.12□□□□□ -2.43
MSH6P52701 RNU6-1149P-201ENST00000516810 97 ntBASIC-0.12□□□□□ -2.43
MSH6P52701 AP003072.1-201ENST00000531740 145 ntBASIC-0.12□□□□□ -2.43
MSH6P52701 MIR4743-201ENST00000584576 69 ntBASIC-0.12□□□□□ -2.43
MSH6P52701 AL356055.1-201ENST00000602528 446 ntBASIC-0.12□□□□□ -2.43
MSH6P52701 RNU1-29P-201ENST00000606574 126 ntBASIC-0.12□□□□□ -2.43
MSH6P52701 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC-0.13□□□□□ -2.43
MSH6P52701 RNU6-578P-201ENST00000390980 103 ntBASIC-0.13□□□□□ -2.43
MSH6P52701 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.13□□□□□ -2.43
MSH6P52701 MIR8062-201ENST00000621515 85 ntBASIC-0.13□□□□□ -2.43
MSH6P52701 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-0.13□□□□□ -2.43
MSH6P52701 SNORD115-2-201ENST00000362842 82 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 SNORD114-5-201ENST00000362928 70 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 RNU4-16P-201ENST00000364737 141 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 SNORD115-20-201ENST00000365099 82 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 MIR145-201ENST00000384967 88 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 MIR643-201ENST00000385267 97 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 MIR1302-6-201ENST00000408466 90 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 MIR548H2-201ENST00000408874 88 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 RNA5SP144-201ENST00000410846 116 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 SNORD57-201ENST00000448188 72 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 Y_RNA.701-201ENST00000516812 110 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 RNU6-782P-201ENST00000516852 104 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 DEFB131E-201ENST00000532329 154 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 MIR4752-201ENST00000579672 72 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 MIR4723-201ENST00000585070 81 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 MIR499B-201ENST00000636498 73 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 U6.104-201ENST00000637979 90 ntBASIC-0.14□□□□□ -2.43
MSH6P52701 Y_RNA.76-201ENST00000362931 109 ntBASIC-0.15□□□□□ -2.43
MSH6P52701 RNA5SP133-201ENST00000363368 119 ntBASIC-0.15□□□□□ -2.43
MSH6P52701 Y_RNA.292-201ENST00000364904 97 ntBASIC-0.15□□□□□ -2.43
MSH6P52701 RNY1P6-201ENST00000384193 109 ntBASIC-0.15□□□□□ -2.43
MSH6P52701 Y_RNA.470-201ENST00000384307 117 ntBASIC-0.15□□□□□ -2.43
MSH6P52701 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.15□□□□□ -2.43
MSH6P52701 Y_RNA.49-201ENST00000362714 112 ntBASIC-0.16□□□□□ -2.43
MSH6P52701 Y_RNA.56-201ENST00000362798 112 ntBASIC-0.16□□□□□ -2.43
MSH6P52701 SNORA63.5-201ENST00000363548 123 ntBASIC-0.16□□□□□ -2.43
MSH6P52701 SNORD114-28-201ENST00000363610 72 ntBASIC-0.16□□□□□ -2.43
MSH6P52701 RNU6-726P-201ENST00000364680 107 ntBASIC-0.16□□□□□ -2.43
MSH6P52701 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.16□□□□□ -2.43
MSH6P52701 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.16□□□□□ -2.43
MSH6P52701 MIR593-201ENST00000384856 100 ntBASIC-0.16□□□□□ -2.43
MSH6P52701 RNU7-129P-201ENST00000516128 62 ntBASIC-0.16□□□□□ -2.43
MSH6P52701 RNU6-635P-201ENST00000516651 102 ntBASIC-0.16□□□□□ -2.43
MSH6P52701 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-0.16□□□□□ -2.43
MSH6P52701 RNU6-702P-201ENST00000364982 107 ntBASIC-0.17□□□□□ -2.44
MSH6P52701 MIR892B-201ENST00000401279 77 ntBASIC-0.17□□□□□ -2.44
MSH6P52701 AC244505.6-201ENST00000452829 130 ntBASIC-0.17□□□□□ -2.44
MSH6P52701 RNU7-113P-201ENST00000459273 62 ntBASIC-0.17□□□□□ -2.44
MSH6P52701 MIR101-2-201ENST00000362195 79 ntBASIC-0.18□□□□□ -2.44
MSH6P52701 RNU6-238P-201ENST00000363313 106 ntBASIC-0.18□□□□□ -2.44
MSH6P52701 SNORD49B-201ENST00000365172 72 ntBASIC-0.18□□□□□ -2.44
MSH6P52701 Y_RNA.366-201ENST00000365540 102 ntBASIC-0.18□□□□□ -2.44
MSH6P52701 RNU4-70P-201ENST00000384579 139 ntBASIC-0.18□□□□□ -2.44
MSH6P52701 RNY3P16-201ENST00000516338 101 ntBASIC-0.18□□□□□ -2.44
MSH6P52701 RNA5SP33-201ENST00000516687 98 ntBASIC-0.18□□□□□ -2.44
MSH6P52701 AC138749.4-201ENST00000563970 127 ntBASIC-0.18□□□□□ -2.44
MSH6P52701 AC138869.1-201ENST00000568623 124 ntBASIC-0.18□□□□□ -2.44
MSH6P52701 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.18□□□□□ -2.44
MSH6P52701 AL162376.1-201ENST00000624117 175 ntBASIC-0.18□□□□□ -2.44
MSH6P52701 Y_RNA.119-201ENST00000363301 96 ntBASIC-0.19□□□□□ -2.44
MSH6P52701 Y_RNA.120-201ENST00000363304 110 ntBASIC-0.19□□□□□ -2.44
MSH6P52701 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.19□□□□□ -2.44
MSH6P52701 SNORD115-24-201ENST00000363528 82 ntBASIC-0.19□□□□□ -2.44
MSH6P52701 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.19□□□□□ -2.44
MSH6P52701 RNU6-652P-201ENST00000365488 107 ntBASIC-0.19□□□□□ -2.44
MSH6P52701 RNU6-1227P-201ENST00000383981 107 ntBASIC-0.19□□□□□ -2.44
MSH6P52701 RNU6-472P-201ENST00000384299 107 ntBASIC-0.19□□□□□ -2.44
MSH6P52701 RNA5SP451-201ENST00000410588 110 ntBASIC-0.19□□□□□ -2.44
MSH6P52701 MRPS18CP4-201ENST00000535821 231 ntBASIC-0.19□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms