Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 MIR4709-201ENST00000577272 72 ntBASIC2.41□□□□□ -2.02
CHRNA4P43681 MIR3935-201ENST00000583472 104 ntBASIC2.41□□□□□ -2.02
CHRNA4P43681 MIR4769-201ENST00000584126 77 ntBASIC2.41□□□□□ -2.02
CHRNA4P43681 AC046143.2-201ENST00000609789 160 ntBASIC2.41□□□□□ -2.02
CHRNA4P43681 AL627230.6-201ENST00000611129 280 ntBASIC2.41□□□□□ -2.02
CHRNA4P43681 MIR8053-201ENST00000613344 75 ntBASIC2.41□□□□□ -2.02
CHRNA4P43681 MIR1291-201ENST00000627649 87 ntBASIC2.41□□□□□ -2.02
CHRNA4P43681 MIR4251-201ENST00000635819 61 ntBASIC2.41□□□□□ -2.02
CHRNA4P43681 AL161722.3-201ENST00000605789 2983 ntBASIC2.4□□□□□ -2.02
CHRNA4P43681 RNU6-957P-201ENST00000363652 99 ntBASIC2.4□□□□□ -2.03
CHRNA4P43681 Y_RNA.207-201ENST00000364142 106 ntBASIC2.4□□□□□ -2.03
CHRNA4P43681 RNU6-1051P-201ENST00000365471 102 ntBASIC2.4□□□□□ -2.03
CHRNA4P43681 MIR520A-201ENST00000384862 85 ntBASIC2.4□□□□□ -2.03
CHRNA4P43681 MIR520C-201ENST00000385005 87 ntBASIC2.4□□□□□ -2.03
CHRNA4P43681 snoU13.26-201ENST00000459452 105 ntBASIC2.4□□□□□ -2.03
CHRNA4P43681 RNU6-977P-201ENST00000516411 103 ntBASIC2.4□□□□□ -2.03
CHRNA4P43681 RNU6-881P-201ENST00000516813 102 ntBASIC2.4□□□□□ -2.03
CHRNA4P43681 RNA5SP437-201ENST00000517249 129 ntBASIC2.4□□□□□ -2.03
CHRNA4P43681 MIR3675-201ENST00000583661 73 ntBASIC2.4□□□□□ -2.03
CHRNA4P43681 AL049779.4-201ENST00000604500 156 ntBASIC2.4□□□□□ -2.03
CHRNA4P43681 AC010297.1-201ENST00000623948 149 ntBASIC2.4□□□□□ -2.03
CHRNA4P43681 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CHRNA4P43681 MIR424-201ENST00000362227 98 ntBASIC2.39□□□□□ -2.03
CHRNA4P43681 Y_RNA.371-201ENST00000365591 113 ntBASIC2.39□□□□□ -2.03
CHRNA4P43681 SNORD116-24-201ENST00000384549 92 ntBASIC2.39□□□□□ -2.03
CHRNA4P43681 MIR563-201ENST00000385080 79 ntBASIC2.39□□□□□ -2.03
CHRNA4P43681 RNA5SP181-201ENST00000410246 98 ntBASIC2.39□□□□□ -2.03
CHRNA4P43681 Y_RNA.606-201ENST00000410579 103 ntBASIC2.39□□□□□ -2.03
CHRNA4P43681 AL513328.1-201ENST00000446460 224 ntBASIC2.39□□□□□ -2.03
CHRNA4P43681 RNU1-41P-201ENST00000516161 162 ntBASIC2.39□□□□□ -2.03
CHRNA4P43681 RNU1-48P-201ENST00000516400 162 ntBASIC2.39□□□□□ -2.03
CHRNA4P43681 AL096861.1-201ENST00000610899 123 ntBASIC2.39□□□□□ -2.03
CHRNA4P43681 AL137847.3-201ENST00000611521 109 ntBASIC2.39□□□□□ -2.03
CHRNA4P43681 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.39□□□□□ -2.03
CHRNA4P43681 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHRNA4P43681 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
CHRNA4P43681 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.38□□□□□ -2.03
CHRNA4P43681 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.38□□□□□ -2.03
CHRNA4P43681 MIR337-201ENST00000362281 93 ntBASIC2.38□□□□□ -2.03
CHRNA4P43681 RNA5SP289-201ENST00000362332 137 ntBASIC2.38□□□□□ -2.03
CHRNA4P43681 SNORD115-22-201ENST00000364456 82 ntBASIC2.38□□□□□ -2.03
CHRNA4P43681 AC244023.1-201ENST00000426884 112 ntBASIC2.38□□□□□ -2.03
CHRNA4P43681 snoU13.27-201ENST00000459278 104 ntBASIC2.38□□□□□ -2.03
CHRNA4P43681 RNU7-106P-201ENST00000459514 67 ntBASIC2.38□□□□□ -2.03
CHRNA4P43681 RNA5SP445-201ENST00000515889 115 ntBASIC2.38□□□□□ -2.03
CHRNA4P43681 SNORA4-201ENST00000584302 138 ntBASIC2.38□□□□□ -2.03
CHRNA4P43681 AC242498.1-201ENST00000604134 111 ntBASIC2.38□□□□□ -2.03
CHRNA4P43681 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHRNA4P43681 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
CHRNA4P43681 AC016717.2-201ENST00000609089 5141 ntBASIC2.37□□□□□ -2.03
CHRNA4P43681 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
CHRNA4P43681 RNY4P3-201ENST00000365254 95 ntBASIC2.37□□□□□ -2.03
CHRNA4P43681 MIR597-201ENST00000384968 97 ntBASIC2.37□□□□□ -2.03
CHRNA4P43681 RNU2-7P-201ENST00000410794 178 ntBASIC2.37□□□□□ -2.03
CHRNA4P43681 MIR2113-201ENST00000459007 91 ntBASIC2.37□□□□□ -2.03
CHRNA4P43681 AC008413.1-201ENST00000511864 177 ntBASIC2.37□□□□□ -2.03
CHRNA4P43681 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.37□□□□□ -2.03
CHRNA4P43681 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.37□□□□□ -2.03
CHRNA4P43681 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
CHRNA4P43681 RNU6-1194P-201ENST00000516208 104 ntBASIC2.36□□□□□ -2.03
CHRNA4P43681 RNU6-1216P-201ENST00000362590 107 ntBASIC2.35□□□□□ -2.03
CHRNA4P43681 U8.2-201ENST00000363156 134 ntBASIC2.35□□□□□ -2.03
CHRNA4P43681 SNORA67.4-201ENST00000384688 142 ntBASIC2.35□□□□□ -2.03
CHRNA4P43681 MIR588-201ENST00000384900 83 ntBASIC2.35□□□□□ -2.03
CHRNA4P43681 SNORD63B-201ENST00000411005 70 ntBASIC2.35□□□□□ -2.03
CHRNA4P43681 AC009474.2-201ENST00000451383 136 ntBASIC2.35□□□□□ -2.03
CHRNA4P43681 RNU7-41P-201ENST00000515917 61 ntBASIC2.35□□□□□ -2.03
CHRNA4P43681 RNA5SP24-201ENST00000516478 95 ntBASIC2.35□□□□□ -2.03
CHRNA4P43681 AC022202.1-201ENST00000613515 211 ntBASIC2.35□□□□□ -2.03
CHRNA4P43681 RNU1-52P-201ENST00000384190 164 ntBASIC2.34□□□□□ -2.03
CHRNA4P43681 RNVU1-2-201ENST00000516326 135 ntBASIC2.34□□□□□ -2.03
CHRNA4P43681 RNA5SP481-201ENST00000516814 122 ntBASIC2.34□□□□□ -2.03
CHRNA4P43681 SUB1P4-201ENST00000566062 339 ntBASIC2.34□□□□□ -2.03
CHRNA4P43681 SNORD53-201ENST00000579969 78 ntBASIC2.34□□□□□ -2.03
CHRNA4P43681 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
CHRNA4P43681 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.33□□□□□ -2.04
CHRNA4P43681 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CHRNA4P43681 MIR30D-201ENST00000362283 70 ntBASIC2.33□□□□□ -2.04
CHRNA4P43681 SNORD45.1-201ENST00000363181 77 ntBASIC2.33□□□□□ -2.04
CHRNA4P43681 SNORD114-30-201ENST00000364448 72 ntBASIC2.33□□□□□ -2.04
CHRNA4P43681 MIR524-201ENST00000385242 87 ntBASIC2.33□□□□□ -2.04
CHRNA4P43681 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
CHRNA4P43681 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.33□□□□□ -2.04
CHRNA4P43681 MIR1283-2-201ENST00000408621 87 ntBASIC2.33□□□□□ -2.04
CHRNA4P43681 RPS27P16-201ENST00000425758 201 ntBASIC2.33□□□□□ -2.04
CHRNA4P43681 snoU13.15-201ENST00000459407 104 ntBASIC2.33□□□□□ -2.04
CHRNA4P43681 RNU2-19P-201ENST00000517288 84 ntBASIC2.33□□□□□ -2.04
CHRNA4P43681 U6.81-201ENST00000612550 106 ntBASIC2.33□□□□□ -2.04
CHRNA4P43681 AC069503.3-201ENST00000618674 145 ntBASIC2.33□□□□□ -2.04
CHRNA4P43681 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
CHRNA4P43681 SNORD113.1-201ENST00000363280 73 ntBASIC2.32□□□□□ -2.04
CHRNA4P43681 RNU6-112P-201ENST00000363599 104 ntBASIC2.32□□□□□ -2.04
CHRNA4P43681 Y_RNA.239-201ENST00000364444 113 ntBASIC2.32□□□□□ -2.04
CHRNA4P43681 SNORA48.1-201ENST00000390879 135 ntBASIC2.32□□□□□ -2.04
CHRNA4P43681 RNU11-3P-201ENST00000391111 133 ntBASIC2.32□□□□□ -2.04
CHRNA4P43681 MIR6740-201ENST00000618268 113 ntBASIC2.32□□□□□ -2.04
CHRNA4P43681 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.32□□□□□ -2.04
CHRNA4P43681 ZNF209P-201ENST00000593450 2304 ntBASIC2.32□□□□□ -2.04
CHRNA4P43681 RNA5SP48-201ENST00000363969 126 ntBASIC2.31□□□□□ -2.04
CHRNA4P43681 Y_RNA.236-201ENST00000364427 111 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 1601.5 ms