Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 Y_RNA.42-201ENST00000362660 108 ntBASIC0.6□□□□□ -2.31
CDH3P22223 MIR7-2-201ENST00000384970 110 ntBASIC0.6□□□□□ -2.31
CDH3P22223 Y_RNA.588-201ENST00000391254 102 ntBASIC0.6□□□□□ -2.31
CDH3P22223 AL603914.1-201ENST00000401964 204 ntBASIC0.6□□□□□ -2.31
CDH3P22223 Y_RNA.690-201ENST00000516603 95 ntBASIC0.6□□□□□ -2.31
CDH3P22223 RNU7-35P-201ENST00000517174 62 ntBASIC0.6□□□□□ -2.31
CDH3P22223 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.59□□□□□ -2.31
CDH3P22223 Y_RNA.270-201ENST00000364693 104 ntBASIC0.59□□□□□ -2.31
CDH3P22223 SNORD18B-201ENST00000365659 72 ntBASIC0.59□□□□□ -2.31
CDH3P22223 Y_RNA.540-201ENST00000384638 111 ntBASIC0.59□□□□□ -2.31
CDH3P22223 SNORD100-201ENST00000408573 76 ntBASIC0.59□□□□□ -2.31
CDH3P22223 RNU4-83P-201ENST00000410863 133 ntBASIC0.59□□□□□ -2.31
CDH3P22223 RPL39P25-201ENST00000449384 154 ntBASIC0.59□□□□□ -2.31
CDH3P22223 RNA5SP436-201ENST00000516020 115 ntBASIC0.59□□□□□ -2.31
CDH3P22223 RNA5SP33-201ENST00000516687 98 ntBASIC0.59□□□□□ -2.31
CDH3P22223 AC133485.4-201ENST00000561835 220 ntBASIC0.59□□□□□ -2.31
CDH3P22223 AC138907.4-201ENST00000570107 226 ntBASIC0.59□□□□□ -2.31
CDH3P22223 MIR3144-201ENST00000579460 79 ntBASIC0.59□□□□□ -2.31
CDH3P22223 AC021443.1-201ENST00000604478 211 ntBASIC0.59□□□□□ -2.31
CDH3P22223 uc_338.17-201ENST00000619633 179 ntBASIC0.59□□□□□ -2.31
CDH3P22223 MIR18A-201ENST00000362310 71 ntBASIC0.58□□□□□ -2.32
CDH3P22223 Y_RNA.398-201ENST00000383952 99 ntBASIC0.58□□□□□ -2.32
CDH3P22223 Y_RNA.531-201ENST00000384589 121 ntBASIC0.58□□□□□ -2.32
CDH3P22223 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
CDH3P22223 RNU6-460P-201ENST00000391158 108 ntBASIC0.58□□□□□ -2.32
CDH3P22223 RNU7-123P-201ENST00000515911 60 ntBASIC0.58□□□□□ -2.32
CDH3P22223 RNU7-79P-201ENST00000516082 62 ntBASIC0.58□□□□□ -2.32
CDH3P22223 MIR3671-201ENST00000580455 88 ntBASIC0.58□□□□□ -2.32
CDH3P22223 MIR4491-201ENST00000581087 68 ntBASIC0.58□□□□□ -2.32
CDH3P22223 RN7SL793P-201ENST00000583259 296 ntBASIC0.58□□□□□ -2.32
CDH3P22223 MIR548AE2-201ENST00000583456 67 ntBASIC0.58□□□□□ -2.32
CDH3P22223 AC098479.1-201ENST00000609225 154 ntBASIC0.58□□□□□ -2.32
CDH3P22223 Y_RNA.8-201ENST00000362353 102 ntBASIC0.57□□□□□ -2.32
CDH3P22223 Y_RNA.366-201ENST00000365540 102 ntBASIC0.57□□□□□ -2.32
CDH3P22223 SNORA36.2-201ENST00000384004 127 ntBASIC0.57□□□□□ -2.32
CDH3P22223 SNORA32-201ENST00000384072 121 ntBASIC0.57□□□□□ -2.32
CDH3P22223 MIR216A-201ENST00000385063 110 ntBASIC0.57□□□□□ -2.32
CDH3P22223 AC108059.2-201ENST00000434626 151 ntBASIC0.57□□□□□ -2.32
CDH3P22223 RNU7-164P-201ENST00000459221 62 ntBASIC0.57□□□□□ -2.32
CDH3P22223 AC002350.1-201ENST00000490759 375 ntBASIC0.57□□□□□ -2.32
CDH3P22223 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.57□□□□□ -2.32
CDH3P22223 AC108081.1-201ENST00000604358 221 ntBASIC0.57□□□□□ -2.32
CDH3P22223 AL589743.1-201ENST00000551932 2712 ntBASIC0.57□□□□□ -2.32
CDH3P22223 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
CDH3P22223 Y_RNA.13-201ENST00000362403 112 ntBASIC0.56□□□□□ -2.32
CDH3P22223 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
CDH3P22223 MIR1270-201ENST00000459320 83 ntBASIC0.56□□□□□ -2.32
CDH3P22223 RNU4-54P-201ENST00000516428 129 ntBASIC0.56□□□□□ -2.32
CDH3P22223 RNU6-448P-201ENST00000517052 107 ntBASIC0.56□□□□□ -2.32
CDH3P22223 MIR6513-201ENST00000621188 64 ntBASIC0.56□□□□□ -2.32
CDH3P22223 RNU6-403P-201ENST00000363163 104 ntBASIC0.55□□□□□ -2.32
CDH3P22223 RNU6-915P-201ENST00000364943 103 ntBASIC0.55□□□□□ -2.32
CDH3P22223 Y_RNA.298-201ENST00000364960 107 ntBASIC0.55□□□□□ -2.32
CDH3P22223 Y_RNA.555-201ENST00000384673 110 ntBASIC0.55□□□□□ -2.32
CDH3P22223 Y_RNA.617-201ENST00000410920 90 ntBASIC0.55□□□□□ -2.32
CDH3P22223 MTND5P41-201ENST00000517498 206 ntBASIC0.55□□□□□ -2.32
CDH3P22223 MIR6082-201ENST00000613604 109 ntBASIC0.55□□□□□ -2.32
CDH3P22223 MIR5087-201ENST00000635826 76 ntBASIC0.55□□□□□ -2.32
CDH3P22223 AC010487.4-201ENST00000637027 61 ntBASIC0.55□□□□□ -2.32
CDH3P22223 RNU4-45P-201ENST00000365469 141 ntBASIC0.54□□□□□ -2.32
CDH3P22223 SNORA50A-201ENST00000384225 134 ntBASIC0.54□□□□□ -2.32
CDH3P22223 MIR140-201ENST00000385282 100 ntBASIC0.54□□□□□ -2.32
CDH3P22223 MIR513C-201ENST00000401352 84 ntBASIC0.54□□□□□ -2.32
CDH3P22223 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.54□□□□□ -2.32
CDH3P22223 SNORA25.12-201ENST00000516202 82 ntBASIC0.54□□□□□ -2.32
CDH3P22223 AC018659.1-201ENST00000551083 169 ntBASIC0.54□□□□□ -2.32
CDH3P22223 AL359881.1-201ENST00000602916 267 ntBASIC0.54□□□□□ -2.32
CDH3P22223 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.54□□□□□ -2.32
CDH3P22223 RNU6-945P-201ENST00000383947 107 ntBASIC0.53□□□□□ -2.32
CDH3P22223 Y_RNA.400-201ENST00000383963 111 ntBASIC0.53□□□□□ -2.32
CDH3P22223 RNU5E-3P-201ENST00000515913 68 ntBASIC0.53□□□□□ -2.32
CDH3P22223 SNORD67.1-201ENST00000516618 108 ntBASIC0.53□□□□□ -2.32
CDH3P22223 SNORA25.16-201ENST00000516741 121 ntBASIC0.53□□□□□ -2.32
CDH3P22223 RNU6-765P-201ENST00000516916 99 ntBASIC0.53□□□□□ -2.32
CDH3P22223 AP003327.1-201ENST00000529684 127 ntBASIC0.53□□□□□ -2.32
CDH3P22223 MIR3121-201ENST00000579680 77 ntBASIC0.53□□□□□ -2.32
CDH3P22223 MIR548X2-201ENST00000579776 100 ntBASIC0.53□□□□□ -2.32
CDH3P22223 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.53□□□□□ -2.32
CDH3P22223 AL137067.1-201ENST00000615933 120 ntBASIC0.53□□□□□ -2.32
CDH3P22223 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.53□□□□□ -2.32
CDH3P22223 PVT1_3.1-201ENST00000620853 95 ntBASIC0.53□□□□□ -2.32
CDH3P22223 AC021753.1-201ENST00000635724 168 ntBASIC0.53□□□□□ -2.32
CDH3P22223 SNORD114-23-201ENST00000363536 72 ntBASIC0.52□□□□□ -2.33
CDH3P22223 Y_RNA.180-201ENST00000363867 113 ntBASIC0.52□□□□□ -2.33
CDH3P22223 Y_RNA.215-201ENST00000364204 112 ntBASIC0.52□□□□□ -2.33
CDH3P22223 SNORA72.6-201ENST00000384520 129 ntBASIC0.52□□□□□ -2.33
CDH3P22223 MIR569-201ENST00000385228 96 ntBASIC0.52□□□□□ -2.33
CDH3P22223 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
CDH3P22223 RNU6-229P-201ENST00000516614 102 ntBASIC0.52□□□□□ -2.33
CDH3P22223 RNY4P20-201ENST00000516678 93 ntBASIC0.52□□□□□ -2.33
CDH3P22223 RNU7-137P-201ENST00000516788 62 ntBASIC0.52□□□□□ -2.33
CDH3P22223 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.52□□□□□ -2.33
CDH3P22223 AC022523.2-201ENST00000561045 150 ntBASIC0.52□□□□□ -2.33
CDH3P22223 Y_RNA.420-201ENST00000384043 110 ntBASIC0.51□□□□□ -2.33
CDH3P22223 MIR193B-201ENST00000384907 83 ntBASIC0.51□□□□□ -2.33
CDH3P22223 RNU4-69P-201ENST00000410677 143 ntBASIC0.51□□□□□ -2.33
CDH3P22223 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
CDH3P22223 IGKV1-22-201ENST00000524313 326 ntBASIC0.51□□□□□ -2.33
CDH3P22223 RNU6-1104P-201ENST00000384723 104 ntBASIC0.5□□□□□ -2.33
CDH3P22223 MIR936-201ENST00000401264 98 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms