Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AC120024.2-201ENST00000576526 175 ntBASIC-1.01□□□□□ -2.57
COL6A3P12111 SNORD19B.1-201ENST00000630615 80 ntBASIC-1.01□□□□□ -2.57
COL6A3P12111 RNU6-664P-201ENST00000362381 107 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 RNU6-660P-201ENST00000364566 109 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 RNU6-108P-201ENST00000365558 107 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 MIR516A2-201ENST00000384888 90 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 MIR516A1-201ENST00000385033 90 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 SNORD42B-201ENST00000458893 67 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 RNU6-719P-201ENST00000516671 104 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 MIR5583-1-201ENST00000580941 59 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 AC006566.1-201ENST00000608943 513 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 AC099654.14-201ENST00000638599 341 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 RNU6-501P-201ENST00000364072 100 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 RNU4-24P-201ENST00000364565 139 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 SNORD101-201ENST00000384027 73 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 Y_RNA.578-201ENST00000390903 88 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 RNU7-187P-201ENST00000458985 68 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 RNU7-106P-201ENST00000459514 67 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC-1.02□□□□□ -2.57
COL6A3P12111 MIR5683-201ENST00000636514 76 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 RNU6-79P-201ENST00000362511 107 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 Y_RNA.105-201ENST00000363182 111 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 RNU6-595P-201ENST00000363944 107 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 RNU6-258P-201ENST00000390884 101 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 MTCO2P21-201ENST00000419780 677 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-1.02□□□□□ -2.57
COL6A3P12111 RNU7-115P-201ENST00000516433 55 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 AC144568.1-201ENST00000520139 137 ntBASIC-1.02□□□□□ -2.57
COL6A3P12111 RNU6-695P-201ENST00000391157 104 ntBASIC-1.03□□□□□ -2.57
COL6A3P12111 RNU2-55P-201ENST00000411146 174 ntBASIC-1.03□□□□□ -2.57
COL6A3P12111 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.03□□□□□ -2.57
COL6A3P12111 U7.5-201ENST00000517224 61 ntBASIC-1.03□□□□□ -2.57
COL6A3P12111 MIR4662B-201ENST00000579498 81 ntBASIC-1.03□□□□□ -2.57
COL6A3P12111 AL158211.2-201ENST00000607282 395 ntBASIC-1.03□□□□□ -2.57
COL6A3P12111 SNORA72.4-201ENST00000384174 132 ntBASIC-1.03□□□□□ -2.57
COL6A3P12111 RNU6-80P-201ENST00000384195 107 ntBASIC-1.03□□□□□ -2.57
COL6A3P12111 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.03□□□□□ -2.57
COL6A3P12111 RNU6-21P-201ENST00000384710 107 ntBASIC-1.03□□□□□ -2.57
COL6A3P12111 AC016550.1-201ENST00000505348 785 ntBASIC-1.03□□□□□ -2.57
COL6A3P12111 RNU6-189P-201ENST00000516120 101 ntBASIC-1.03□□□□□ -2.57
COL6A3P12111 MIR3123-201ENST00000583417 75 ntBASIC-1.03□□□□□ -2.57
COL6A3P12111 RNU6-235P-201ENST00000362644 107 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 RNU6-626P-201ENST00000363354 107 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 RNU6-214P-201ENST00000384130 107 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 Y_RNA.515-201ENST00000384535 112 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 AL009048.1-201ENST00000450437 298 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 RNU7-24P-201ENST00000458867 62 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 AC084781.2-201ENST00000615568 161 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 RNU5E-5P-201ENST00000365379 116 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 RNU6-841P-201ENST00000383872 107 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 Y_RNA.501-201ENST00000384467 103 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 SNORD19-201ENST00000391191 68 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 Y_RNA.618-201ENST00000410949 107 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 AP002963.1-201ENST00000530590 184 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 MIR3145-201ENST00000580727 82 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 U6.100-201ENST00000636230 99 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 RNU6-82P-201ENST00000363970 107 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 SNORA32-201ENST00000384072 121 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 SNORA19.3-201ENST00000516165 130 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 MTND4P7-201ENST00000523876 130 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 AC024909.2-201ENST00000553035 286 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 AC009161.2-201ENST00000624626 138 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 MIR6841-201ENST00000637129 72 ntBASIC-1.04□□□□□ -2.58
COL6A3P12111 Y_RNA.106-201ENST00000363189 100 ntBASIC-1.05□□□□□ -2.58
COL6A3P12111 Y_RNA.383-201ENST00000383855 97 ntBASIC-1.05□□□□□ -2.58
COL6A3P12111 SNORD77B-201ENST00000391112 67 ntBASIC-1.05□□□□□ -2.58
COL6A3P12111 Y_RNA.781-201ENST00000620301 103 ntBASIC-1.05□□□□□ -2.58
COL6A3P12111 RNY4P9-201ENST00000363194 97 ntBASIC-1.05□□□□□ -2.58
COL6A3P12111 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.05□□□□□ -2.58
COL6A3P12111 Z83846.1-201ENST00000446798 265 ntBASIC-1.05□□□□□ -2.58
COL6A3P12111 RNU6-126P-201ENST00000516685 103 ntBASIC-1.05□□□□□ -2.58
COL6A3P12111 MIR4724-201ENST00000579485 89 ntBASIC-1.05□□□□□ -2.58
COL6A3P12111 AL021707.8-201ENST00000609428 183 ntBASIC-1.05□□□□□ -2.58
COL6A3P12111 RNU6-495P-201ENST00000362995 107 ntBASIC-1.06□□□□□ -2.58
COL6A3P12111 RNU6-647P-201ENST00000364243 107 ntBASIC-1.06□□□□□ -2.58
COL6A3P12111 SNORD37.1-201ENST00000390968 65 ntBASIC-1.06□□□□□ -2.58
COL6A3P12111 AL590004.1-201ENST00000405321 300 ntBASIC-1.06□□□□□ -2.58
COL6A3P12111 RNU6-195P-201ENST00000411352 109 ntBASIC-1.06□□□□□ -2.58
COL6A3P12111 AC098826.2-201ENST00000452011 651 ntBASIC-1.06□□□□□ -2.58
COL6A3P12111 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.06□□□□□ -2.58
COL6A3P12111 AL512360.1-201ENST00000555346 234 ntBASIC-1.06□□□□□ -2.58
COL6A3P12111 MIR548AE2-201ENST00000583456 67 ntBASIC-1.06□□□□□ -2.58
COL6A3P12111 AC021443.1-201ENST00000604478 211 ntBASIC-1.06□□□□□ -2.58
COL6A3P12111 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.06□□□□□ -2.58
COL6A3P12111 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.06□□□□□ -2.58
COL6A3P12111 RNU6-155P-201ENST00000516347 100 ntBASIC-1.06□□□□□ -2.58
COL6A3P12111 MIR2355-201ENST00000517199 87 ntBASIC-1.06□□□□□ -2.58
COL6A3P12111 CYP3A54P-201ENST00000566950 75 ntBASIC-1.06□□□□□ -2.58
COL6A3P12111 PISRT1.1-201ENST00000616930 107 ntBASIC-1.06□□□□□ -2.58
COL6A3P12111 Y_RNA.66-201ENST00000362862 102 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 190.6 ms