Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 RNU7-137P-201ENST00000516788 62 ntBASIC-1.03□□□□□ -2.57
FREM3P0C091 RNU6-158P-201ENST00000517104 100 ntBASIC-1.03□□□□□ -2.57
FREM3P0C091 MIR5688-201ENST00000580619 83 ntBASIC-1.03□□□□□ -2.57
FREM3P0C091 MIR4441-201ENST00000582623 100 ntBASIC-1.03□□□□□ -2.57
FREM3P0C091 AC037487.3-201ENST00000606668 112 ntBASIC-1.03□□□□□ -2.57
FREM3P0C091 Y_RNA.214-201ENST00000364201 112 ntBASIC-1.04□□□□□ -2.58
FREM3P0C091 AC093423.1-201ENST00000440817 142 ntBASIC-1.04□□□□□ -2.58
FREM3P0C091 AP000533.3-201ENST00000447704 118 ntBASIC-1.04□□□□□ -2.58
FREM3P0C091 MTND4P17-201ENST00000470444 350 ntBASIC-1.04□□□□□ -2.58
FREM3P0C091 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-1.04□□□□□ -2.58
FREM3P0C091 MRPS18CP4-201ENST00000535821 231 ntBASIC-1.04□□□□□ -2.58
FREM3P0C091 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.04□□□□□ -2.58
FREM3P0C091 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC-1.04□□□□□ -2.58
FREM3P0C091 RNU4-90P-201ENST00000362773 141 ntBASIC-1.04□□□□□ -2.58
FREM3P0C091 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.04□□□□□ -2.58
FREM3P0C091 RNU7-48P-201ENST00000458875 63 ntBASIC-1.04□□□□□ -2.58
FREM3P0C091 MIR1270-201ENST00000459320 83 ntBASIC-1.04□□□□□ -2.58
FREM3P0C091 AC026421.1-201ENST00000519101 163 ntBASIC-1.04□□□□□ -2.58
FREM3P0C091 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.04□□□□□ -2.58
FREM3P0C091 MIR548AE1-201ENST00000583292 70 ntBASIC-1.04□□□□□ -2.58
FREM3P0C091 RNU6-86P-201ENST00000606534 107 ntBASIC-1.04□□□□□ -2.58
FREM3P0C091 Y_RNA.357-201ENST00000365487 109 ntBASIC-1.05□□□□□ -2.58
FREM3P0C091 Y_RNA.646-201ENST00000410980 101 ntBASIC-1.05□□□□□ -2.58
FREM3P0C091 AC021146.9-201ENST00000512503 156 ntBASIC-1.05□□□□□ -2.58
FREM3P0C091 SNORA40.17-201ENST00000517256 115 ntBASIC-1.05□□□□□ -2.58
FREM3P0C091 AC097639.2-201ENST00000603159 172 ntBASIC-1.05□□□□□ -2.58
FREM3P0C091 Z99129.1-201ENST00000612510 255 ntBASIC-1.05□□□□□ -2.58
FREM3P0C091 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.06□□□□□ -2.58
FREM3P0C091 RNU4-50P-201ENST00000364361 141 ntBASIC-1.06□□□□□ -2.58
FREM3P0C091 MIRLET7B-201ENST00000385140 83 ntBASIC-1.06□□□□□ -2.58
FREM3P0C091 Y_RNA.653-201ENST00000459091 95 ntBASIC-1.06□□□□□ -2.58
FREM3P0C091 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.06□□□□□ -2.58
FREM3P0C091 SNORA22.1-201ENST00000362701 134 ntBASIC-1.06□□□□□ -2.58
FREM3P0C091 Y_RNA.119-201ENST00000363301 96 ntBASIC-1.06□□□□□ -2.58
FREM3P0C091 RNU6-571P-201ENST00000384128 107 ntBASIC-1.06□□□□□ -2.58
FREM3P0C091 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.06□□□□□ -2.58
FREM3P0C091 RNU6-21P-201ENST00000384710 107 ntBASIC-1.06□□□□□ -2.58
FREM3P0C091 MIR517B-201ENST00000385102 67 ntBASIC-1.06□□□□□ -2.58
FREM3P0C091 MIR518B-201ENST00000385127 83 ntBASIC-1.06□□□□□ -2.58
FREM3P0C091 HSPE1P25-201ENST00000455484 251 ntBASIC-1.06□□□□□ -2.58
FREM3P0C091 MIR6129-201ENST00000616087 109 ntBASIC-1.06□□□□□ -2.58
FREM3P0C091 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.07□□□□□ -2.58
FREM3P0C091 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.07□□□□□ -2.58
FREM3P0C091 RNY4P14-201ENST00000363656 96 ntBASIC-1.07□□□□□ -2.58
FREM3P0C091 SNORA51.5-201ENST00000384126 131 ntBASIC-1.07□□□□□ -2.58
FREM3P0C091 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.07□□□□□ -2.58
FREM3P0C091 RNU6-130P-201ENST00000411112 103 ntBASIC-1.07□□□□□ -2.58
FREM3P0C091 MIR4272-201ENST00000635924 64 ntBASIC-1.07□□□□□ -2.58
FREM3P0C091 RNY4P6-201ENST00000363667 96 ntBASIC-1.07□□□□□ -2.58
FREM3P0C091 MIR519A1-201ENST00000385257 85 ntBASIC-1.07□□□□□ -2.58
FREM3P0C091 MIR526A2-201ENST00000390198 65 ntBASIC-1.07□□□□□ -2.58
FREM3P0C091 RNA5SP144-201ENST00000410846 116 ntBASIC-1.07□□□□□ -2.58
FREM3P0C091 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.07□□□□□ -2.58
FREM3P0C091 DEFB117-201ENST00000602356 141 ntBASIC-1.07□□□□□ -2.58
FREM3P0C091 AC138305.3-201ENST00000624988 240 ntBASIC-1.07□□□□□ -2.58
FREM3P0C091 MIR367-201ENST00000362299 68 ntBASIC-1.08□□□□□ -2.58
FREM3P0C091 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.08□□□□□ -2.58
FREM3P0C091 RNU6-818P-201ENST00000364837 108 ntBASIC-1.08□□□□□ -2.58
FREM3P0C091 RNU6-890P-201ENST00000384121 107 ntBASIC-1.08□□□□□ -2.58
FREM3P0C091 SNORD116-29-201ENST00000384516 83 ntBASIC-1.08□□□□□ -2.58
FREM3P0C091 MIR548K-201ENST00000408406 116 ntBASIC-1.08□□□□□ -2.58
FREM3P0C091 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC-1.08□□□□□ -2.58
FREM3P0C091 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC-1.08□□□□□ -2.58
FREM3P0C091 AL731563.1-201ENST00000442202 214 ntBASIC-1.08□□□□□ -2.58
FREM3P0C091 RNU6-120P-201ENST00000516077 103 ntBASIC-1.08□□□□□ -2.58
FREM3P0C091 RNA5SP169-201ENST00000517268 117 ntBASIC-1.08□□□□□ -2.58
FREM3P0C091 AL606534.2-204ENST00000635008 178 ntBASIC-1.08□□□□□ -2.58
FREM3P0C091 RNU6-1272P-201ENST00000362776 107 ntBASIC-1.09□□□□□ -2.58
FREM3P0C091 RNU6-888P-201ENST00000363010 101 ntBASIC-1.09□□□□□ -2.58
FREM3P0C091 Y_RNA.171-201ENST00000363760 102 ntBASIC-1.09□□□□□ -2.58
FREM3P0C091 RNU6-1119P-201ENST00000384349 108 ntBASIC-1.09□□□□□ -2.58
FREM3P0C091 SNORD116-6-201ENST00000384711 96 ntBASIC-1.09□□□□□ -2.58
FREM3P0C091 MTCO2P24-201ENST00000515611 426 ntBASIC-1.09□□□□□ -2.58
FREM3P0C091 MIR3974-201ENST00000637126 96 ntBASIC-1.09□□□□□ -2.58
FREM3P0C091 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.09□□□□□ -2.58
FREM3P0C091 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.09□□□□□ -2.58
FREM3P0C091 MIR181A1-201ENST00000385026 110 ntBASIC-1.09□□□□□ -2.58
FREM3P0C091 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.09□□□□□ -2.58
FREM3P0C091 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.09□□□□□ -2.58
FREM3P0C091 MTATP6P19-201ENST00000413797 659 ntBASIC-1.09□□□□□ -2.58
FREM3P0C091 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC-1.09□□□□□ -2.58
FREM3P0C091 AC244090.1-201ENST00000441884 93 ntBASIC-1.09□□□□□ -2.58
FREM3P0C091 RNU7-195P-201ENST00000458793 62 ntBASIC-1.09□□□□□ -2.58
FREM3P0C091 AC138907.4-201ENST00000570107 226 ntBASIC-1.09□□□□□ -2.58
FREM3P0C091 MIR516A2-201ENST00000384888 90 ntBASIC-1.1□□□□□ -2.59
FREM3P0C091 MIR516A1-201ENST00000385033 90 ntBASIC-1.1□□□□□ -2.59
FREM3P0C091 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-1.1□□□□□ -2.59
FREM3P0C091 Y_RNA.596-201ENST00000410462 109 ntBASIC-1.1□□□□□ -2.59
FREM3P0C091 MIR548AG2-201ENST00000581228 64 ntBASIC-1.1□□□□□ -2.59
FREM3P0C091 MIR5704-201ENST00000584029 77 ntBASIC-1.1□□□□□ -2.59
FREM3P0C091 uc_338.19-201ENST00000616808 99 ntBASIC-1.1□□□□□ -2.59
FREM3P0C091 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.1□□□□□ -2.59
FREM3P0C091 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.1□□□□□ -2.59
FREM3P0C091 SNORD114-4-201ENST00000363962 75 ntBASIC-1.1□□□□□ -2.59
FREM3P0C091 SNORD115-20-201ENST00000365099 82 ntBASIC-1.1□□□□□ -2.59
FREM3P0C091 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.1□□□□□ -2.59
FREM3P0C091 RNU6-431P-201ENST00000383874 107 ntBASIC-1.1□□□□□ -2.59
FREM3P0C091 MTND1P1-201ENST00000445453 368 ntBASIC-1.1□□□□□ -2.59
FREM3P0C091 RNU6-191P-201ENST00000516295 94 ntBASIC-1.1□□□□□ -2.59
FREM3P0C091 C8orf59P2-201ENST00000603441 271 ntBASIC-1.1□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 411.9 ms