Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.67□□□□□ -2.68
TPM1P09493 SNORD115-46-201ENST00000390982 71 ntBASIC-1.67□□□□□ -2.68
TPM1P09493 SNORD38.3-201ENST00000516599 73 ntBASIC-1.67□□□□□ -2.68
TPM1P09493 SNORA27.4-201ENST00000516650 95 ntBASIC-1.67□□□□□ -2.68
TPM1P09493 AP001328.1-201ENST00000528550 176 ntBASIC-1.67□□□□□ -2.68
TPM1P09493 AP000676.1-201ENST00000533307 52 ntBASIC-1.67□□□□□ -2.68
TPM1P09493 MIR20A-201ENST00000362279 71 ntBASIC-1.68□□□□□ -2.68
TPM1P09493 RNU6-290P-201ENST00000365212 101 ntBASIC-1.68□□□□□ -2.68
TPM1P09493 SNORD115-44-201ENST00000365391 82 ntBASIC-1.68□□□□□ -2.68
TPM1P09493 Y_RNA.394-201ENST00000383942 103 ntBASIC-1.68□□□□□ -2.68
TPM1P09493 Y_RNA.516-201ENST00000384541 124 ntBASIC-1.68□□□□□ -2.68
TPM1P09493 MIR7-2-201ENST00000384970 110 ntBASIC-1.68□□□□□ -2.68
TPM1P09493 SNORD83B-201ENST00000386745 93 ntBASIC-1.68□□□□□ -2.68
TPM1P09493 MIR548F1-201ENST00000408667 84 ntBASIC-1.68□□□□□ -2.68
TPM1P09493 AC082651.2-201ENST00000496833 166 ntBASIC-1.68□□□□□ -2.68
TPM1P09493 RNU6-758P-201ENST00000516292 89 ntBASIC-1.68□□□□□ -2.68
TPM1P09493 RNU6-1149P-201ENST00000516810 97 ntBASIC-1.68□□□□□ -2.68
TPM1P09493 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-1.68□□□□□ -2.68
TPM1P09493 AC108676.2-201ENST00000605225 163 ntBASIC-1.68□□□□□ -2.68
TPM1P09493 AC037487.3-201ENST00000606668 112 ntBASIC-1.68□□□□□ -2.68
TPM1P09493 MTND4LP32-201ENST00000636111 270 ntBASIC-1.68□□□□□ -2.68
TPM1P09493 Y_RNA.3-201ENST00000362331 103 ntBASIC-1.69□□□□□ -2.68
TPM1P09493 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.69□□□□□ -2.68
TPM1P09493 Y_RNA.279-201ENST00000364763 95 ntBASIC-1.69□□□□□ -2.68
TPM1P09493 RNU6-326P-201ENST00000365480 107 ntBASIC-1.69□□□□□ -2.68
TPM1P09493 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.69□□□□□ -2.68
TPM1P09493 Y_RNA.562-201ENST00000384695 113 ntBASIC-1.69□□□□□ -2.68
TPM1P09493 MIR616-201ENST00000385293 97 ntBASIC-1.69□□□□□ -2.68
TPM1P09493 RNU6-1321P-201ENST00000390905 107 ntBASIC-1.69□□□□□ -2.68
TPM1P09493 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.69□□□□□ -2.68
TPM1P09493 RNY4P36-201ENST00000391116 96 ntBASIC-1.69□□□□□ -2.68
TPM1P09493 SNORA79-201ENST00000408376 140 ntBASIC-1.69□□□□□ -2.68
TPM1P09493 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-1.69□□□□□ -2.68
TPM1P09493 SNORD81.2-201ENST00000365153 76 ntBASIC-1.7□□□□□ -2.68
TPM1P09493 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-1.7□□□□□ -2.68
TPM1P09493 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.7□□□□□ -2.68
TPM1P09493 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.7□□□□□ -2.68
TPM1P09493 RNU6-502P-201ENST00000362419 108 ntBASIC-1.71□□□□□ -2.68
TPM1P09493 Y_RNA.176-201ENST00000363815 109 ntBASIC-1.71□□□□□ -2.68
TPM1P09493 RNU6-211P-201ENST00000384047 107 ntBASIC-1.71□□□□□ -2.68
TPM1P09493 SNORD116-29-201ENST00000384516 83 ntBASIC-1.71□□□□□ -2.68
TPM1P09493 RNU7-48P-201ENST00000458875 63 ntBASIC-1.71□□□□□ -2.68
TPM1P09493 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.71□□□□□ -2.68
TPM1P09493 AC011603.4-201ENST00000611325 277 ntBASIC-1.71□□□□□ -2.68
TPM1P09493 RNU6-170P-201ENST00000362832 104 ntBASIC-1.72□□□□□ -2.68
TPM1P09493 Y_RNA.252-201ENST00000364556 101 ntBASIC-1.72□□□□□ -2.68
TPM1P09493 RNU6-453P-201ENST00000516819 85 ntBASIC-1.72□□□□□ -2.68
TPM1P09493 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.73□□□□□ -2.69
TPM1P09493 AC112487.2-201ENST00000637950 304 ntBASIC-1.73□□□□□ -2.69
TPM1P09493 MT-TY-201ENST00000387409 66 ntBASIC-1.74□□□□□ -2.69
TPM1P09493 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.74□□□□□ -2.69
TPM1P09493 RNU6-721P-201ENST00000410155 105 ntBASIC-1.74□□□□□ -2.69
TPM1P09493 Z95118.1-201ENST00000421372 247 ntBASIC-1.74□□□□□ -2.69
TPM1P09493 AC244090.1-201ENST00000441884 93 ntBASIC-1.74□□□□□ -2.69
TPM1P09493 AC084782.3-201ENST00000612282 578 ntBASIC-1.74□□□□□ -2.69
TPM1P09493 Y_RNA.98-201ENST00000363109 102 ntBASIC-1.75□□□□□ -2.69
TPM1P09493 SNORD114-25-201ENST00000363742 72 ntBASIC-1.75□□□□□ -2.69
TPM1P09493 snoU2_19.4-201ENST00000364329 80 ntBASIC-1.75□□□□□ -2.69
TPM1P09493 Y_RNA.531-201ENST00000384589 121 ntBASIC-1.75□□□□□ -2.69
TPM1P09493 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-1.75□□□□□ -2.69
TPM1P09493 Y_RNA.718-201ENST00000517110 102 ntBASIC-1.75□□□□□ -2.69
TPM1P09493 AC092794.1-201ENST00000612734 582 ntBASIC-1.75□□□□□ -2.69
TPM1P09493 UBE2WP1-201ENST00000362030 340 ntBASIC-1.76□□□□□ -2.69
TPM1P09493 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.76□□□□□ -2.69
TPM1P09493 Y_RNA.466-201ENST00000384294 113 ntBASIC-1.76□□□□□ -2.69
TPM1P09493 MIR624-201ENST00000385217 97 ntBASIC-1.76□□□□□ -2.69
TPM1P09493 SPINT5P-201ENST00000448174 155 ntBASIC-1.76□□□□□ -2.69
TPM1P09493 MIR2113-201ENST00000459007 91 ntBASIC-1.76□□□□□ -2.69
TPM1P09493 RNU7-55P-201ENST00000459426 62 ntBASIC-1.76□□□□□ -2.69
TPM1P09493 AP001362.1-201ENST00000625165 124 ntBASIC-1.76□□□□□ -2.69
TPM1P09493 MTND5P18-201ENST00000445624 1801 ntBASIC-1.77□□□□□ -2.69
TPM1P09493 Y_RNA.187-201ENST00000363918 113 ntBASIC-1.77□□□□□ -2.69
TPM1P09493 Y_RNA.387-201ENST00000383918 102 ntBASIC-1.77□□□□□ -2.69
TPM1P09493 Y_RNA.448-201ENST00000384185 108 ntBASIC-1.77□□□□□ -2.69
TPM1P09493 AC098614.3-201ENST00000438957 440 ntBASIC-1.77□□□□□ -2.69
TPM1P09493 snoU13.13-201ENST00000458842 104 ntBASIC-1.77□□□□□ -2.69
TPM1P09493 SNORD116-25-201ENST00000516517 92 ntBASIC-1.77□□□□□ -2.69
TPM1P09493 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.77□□□□□ -2.69
TPM1P09493 AC093783.1-201ENST00000612976 329 ntBASIC-1.77□□□□□ -2.69
TPM1P09493 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.78□□□□□ -2.69
TPM1P09493 Y_RNA.160-201ENST00000363677 92 ntBASIC-1.78□□□□□ -2.69
TPM1P09493 SNORD95.1-201ENST00000364099 68 ntBASIC-1.78□□□□□ -2.69
TPM1P09493 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.78□□□□□ -2.69
TPM1P09493 RNU6-728P-201ENST00000365375 104 ntBASIC-1.78□□□□□ -2.69
TPM1P09493 SNORD116-2-201ENST00000384274 95 ntBASIC-1.78□□□□□ -2.69
TPM1P09493 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.78□□□□□ -2.69
TPM1P09493 SNORD116-6-201ENST00000384711 96 ntBASIC-1.78□□□□□ -2.69
TPM1P09493 MIR1270-201ENST00000459320 83 ntBASIC-1.78□□□□□ -2.69
TPM1P09493 RNU6-561P-201ENST00000516222 102 ntBASIC-1.78□□□□□ -2.69
TPM1P09493 MIR3179-1-201ENST00000578940 84 ntBASIC-1.78□□□□□ -2.69
TPM1P09493 MIR3179-2-201ENST00000579107 84 ntBASIC-1.78□□□□□ -2.69
TPM1P09493 MIR3179-3-201ENST00000579566 84 ntBASIC-1.78□□□□□ -2.69
TPM1P09493 MIR3179-4-201ENST00000617599 84 ntBASIC-1.78□□□□□ -2.69
TPM1P09493 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.79□□□□□ -2.7
TPM1P09493 SNORA51.5-201ENST00000384126 131 ntBASIC-1.79□□□□□ -2.7
TPM1P09493 MIR206-201ENST00000384872 86 ntBASIC-1.79□□□□□ -2.7
TPM1P09493 RNU4-43P-201ENST00000410628 137 ntBASIC-1.79□□□□□ -2.7
TPM1P09493 RNU7-152P-201ENST00000458982 64 ntBASIC-1.79□□□□□ -2.7
TPM1P09493 SNORA63.7-201ENST00000365579 123 ntBASIC-1.8□□□□□ -2.7
TPM1P09493 RNU7-106P-201ENST00000459514 67 ntBASIC-1.8□□□□□ -2.7
Retrieved 100 of 98,524 protein–RNA pairs in 183.5 ms