Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 Y_RNA.30-201ENST00000362572 97 ntBASIC1.48□□□□□ -2.17
TOP3BO95985 SNORD33-201ENST00000362761 85 ntBASIC1.48□□□□□ -2.17
TOP3BO95985 RNY3P2-201ENST00000362918 102 ntBASIC1.48□□□□□ -2.17
TOP3BO95985 RNU6-1131P-201ENST00000364955 107 ntBASIC1.48□□□□□ -2.17
TOP3BO95985 MIR488-201ENST00000365739 83 ntBASIC1.48□□□□□ -2.17
TOP3BO95985 MIR605-201ENST00000385078 83 ntBASIC1.48□□□□□ -2.17
TOP3BO95985 MIR577-201ENST00000385196 96 ntBASIC1.48□□□□□ -2.17
TOP3BO95985 AL451046.2-201ENST00000403074 277 ntBASIC1.48□□□□□ -2.17
TOP3BO95985 MTATP8P2-201ENST00000435212 202 ntBASIC1.48□□□□□ -2.17
TOP3BO95985 RNU7-41P-201ENST00000515917 61 ntBASIC1.48□□□□□ -2.17
TOP3BO95985 MIR548AO-201ENST00000579992 96 ntBASIC1.48□□□□□ -2.17
TOP3BO95985 FAM71BP1-201ENST00000604431 523 ntBASIC1.48□□□□□ -2.17
TOP3BO95985 MIR8065-201ENST00000620577 100 ntBASIC1.48□□□□□ -2.17
TOP3BO95985 MIR4251-201ENST00000635819 61 ntBASIC1.48□□□□□ -2.17
TOP3BO95985 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TOP3BO95985 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TOP3BO95985 Y_RNA.93-201ENST00000363066 109 ntBASIC1.47□□□□□ -2.17
TOP3BO95985 RNU6-832P-201ENST00000363319 107 ntBASIC1.47□□□□□ -2.17
TOP3BO95985 RNU6-49P-201ENST00000384256 107 ntBASIC1.47□□□□□ -2.17
TOP3BO95985 RNU6-679P-201ENST00000391003 106 ntBASIC1.47□□□□□ -2.17
TOP3BO95985 RNU6-955P-201ENST00000410497 104 ntBASIC1.47□□□□□ -2.17
TOP3BO95985 SNORA7.5-201ENST00000410672 110 ntBASIC1.47□□□□□ -2.17
TOP3BO95985 RNU6-602P-201ENST00000411155 105 ntBASIC1.47□□□□□ -2.17
TOP3BO95985 AC245047.7-201ENST00000440265 293 ntBASIC1.47□□□□□ -2.17
TOP3BO95985 AC023790.1-201ENST00000482174 347 ntBASIC1.47□□□□□ -2.17
TOP3BO95985 SCARNA23-201ENST00000516060 130 ntBASIC1.47□□□□□ -2.17
TOP3BO95985 RNU6-922P-201ENST00000516753 99 ntBASIC1.47□□□□□ -2.17
TOP3BO95985 AC019176.1-201ENST00000518519 225 ntBASIC1.47□□□□□ -2.17
TOP3BO95985 MIR3937-201ENST00000580135 106 ntBASIC1.47□□□□□ -2.17
TOP3BO95985 Y_RNA.107-201ENST00000363190 121 ntBASIC1.46□□□□□ -2.18
TOP3BO95985 SNORD41-201ENST00000386967 70 ntBASIC1.46□□□□□ -2.18
TOP3BO95985 RNU1-78P-201ENST00000391248 165 ntBASIC1.46□□□□□ -2.18
TOP3BO95985 Y_RNA.601-201ENST00000410500 113 ntBASIC1.46□□□□□ -2.18
TOP3BO95985 AC090844.1-201ENST00000422019 156 ntBASIC1.46□□□□□ -2.18
TOP3BO95985 SNORA72.7-201ENST00000516349 94 ntBASIC1.46□□□□□ -2.18
TOP3BO95985 SNORD111.1-201ENST00000516421 86 ntBASIC1.46□□□□□ -2.18
TOP3BO95985 CYP3A52P-201ENST00000563326 91 ntBASIC1.46□□□□□ -2.18
TOP3BO95985 MIR2052-201ENST00000636055 55 ntBASIC1.46□□□□□ -2.18
TOP3BO95985 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
TOP3BO95985 Y_RNA.10-201ENST00000362371 110 ntBASIC1.45□□□□□ -2.18
TOP3BO95985 RNU6-294P-201ENST00000364999 102 ntBASIC1.45□□□□□ -2.18
TOP3BO95985 SNORA18-201ENST00000384416 132 ntBASIC1.45□□□□□ -2.18
TOP3BO95985 RNU6-1065P-201ENST00000384513 106 ntBASIC1.45□□□□□ -2.18
TOP3BO95985 AL354695.1-201ENST00000427935 228 ntBASIC1.45□□□□□ -2.18
TOP3BO95985 RNU6-521P-201ENST00000516663 105 ntBASIC1.45□□□□□ -2.18
TOP3BO95985 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
TOP3BO95985 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.44□□□□□ -2.18
TOP3BO95985 AC027119.1-201ENST00000440877 241 ntBASIC1.44□□□□□ -2.18
TOP3BO95985 RNU6-1223P-201ENST00000517124 104 ntBASIC1.44□□□□□ -2.18
TOP3BO95985 RNU7-35P-201ENST00000517174 62 ntBASIC1.44□□□□□ -2.18
TOP3BO95985 SNORA31.24-201ENST00000517232 57 ntBASIC1.44□□□□□ -2.18
TOP3BO95985 MIR6078-201ENST00000611069 100 ntBASIC1.44□□□□□ -2.18
TOP3BO95985 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
TOP3BO95985 MALAT1.1-201ENST00000618249 95 ntBASIC1.44□□□□□ -2.18
TOP3BO95985 Y_RNA.68-201ENST00000362881 102 ntBASIC1.43□□□□□ -2.18
TOP3BO95985 RNA5SP48-201ENST00000363969 126 ntBASIC1.43□□□□□ -2.18
TOP3BO95985 SNORD115-35-201ENST00000365122 82 ntBASIC1.43□□□□□ -2.18
TOP3BO95985 Y_RNA.377-201ENST00000365644 108 ntBASIC1.43□□□□□ -2.18
TOP3BO95985 Y_RNA.433-201ENST00000384089 102 ntBASIC1.43□□□□□ -2.18
TOP3BO95985 RNU6-1201P-201ENST00000384227 107 ntBASIC1.43□□□□□ -2.18
TOP3BO95985 RNY1P7-201ENST00000384743 110 ntBASIC1.43□□□□□ -2.18
TOP3BO95985 MIR517C-201ENST00000385103 95 ntBASIC1.43□□□□□ -2.18
TOP3BO95985 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.43□□□□□ -2.18
TOP3BO95985 RNU6-1018P-201ENST00000516577 106 ntBASIC1.43□□□□□ -2.18
TOP3BO95985 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.43□□□□□ -2.18
TOP3BO95985 RNU6-1313P-201ENST00000362622 102 ntBASIC1.42□□□□□ -2.18
TOP3BO95985 Y_RNA.220-201ENST00000364244 109 ntBASIC1.42□□□□□ -2.18
TOP3BO95985 Y_RNA.342-201ENST00000365352 113 ntBASIC1.42□□□□□ -2.18
TOP3BO95985 MIR206-201ENST00000384872 86 ntBASIC1.42□□□□□ -2.18
TOP3BO95985 MIR548J-201ENST00000408833 112 ntBASIC1.42□□□□□ -2.18
TOP3BO95985 RNU6-795P-201ENST00000516323 103 ntBASIC1.42□□□□□ -2.18
TOP3BO95985 MIR3192-201ENST00000584920 77 ntBASIC1.42□□□□□ -2.18
TOP3BO95985 AL096861.1-201ENST00000610899 123 ntBASIC1.42□□□□□ -2.18
TOP3BO95985 GHRLOS.1-201ENST00000610995 70 ntBASIC1.42□□□□□ -2.18
TOP3BO95985 MIR7974-201ENST00000615835 79 ntBASIC1.42□□□□□ -2.18
TOP3BO95985 AC012531.4-201ENST00000616509 177 ntBASIC1.42□□□□□ -2.18
TOP3BO95985 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
TOP3BO95985 RNU6-170P-201ENST00000362832 104 ntBASIC1.41□□□□□ -2.18
TOP3BO95985 Y_RNA.558-201ENST00000384685 113 ntBASIC1.41□□□□□ -2.18
TOP3BO95985 SNORD38B-201ENST00000384690 67 ntBASIC1.41□□□□□ -2.18
TOP3BO95985 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.41□□□□□ -2.18
TOP3BO95985 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.41□□□□□ -2.18
TOP3BO95985 AC096949.1-201ENST00000412047 152 ntBASIC1.41□□□□□ -2.18
TOP3BO95985 AC004941.2-201ENST00000427009 228 ntBASIC1.41□□□□□ -2.18
TOP3BO95985 RNU7-2P-201ENST00000516096 62 ntBASIC1.41□□□□□ -2.18
TOP3BO95985 MIR548Z-201ENST00000584743 97 ntBASIC1.41□□□□□ -2.18
TOP3BO95985 AL357312.1-201ENST00000603879 298 ntBASIC1.41□□□□□ -2.18
TOP3BO95985 AL442128.1-201ENST00000615151 90 ntBASIC1.41□□□□□ -2.18
TOP3BO95985 SNORD38B-202ENST00000625943 69 ntBASIC1.41□□□□□ -2.18
TOP3BO95985 AL512310.12-203ENST00000640543 90 ntBASIC1.41□□□□□ -2.18
TOP3BO95985 AC091304.10-201ENST00000641554 121 ntBASIC1.41□□□□□ -2.18
TOP3BO95985 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
TOP3BO95985 SNORD73B-201ENST00000364394 72 ntBASIC1.4□□□□□ -2.19
TOP3BO95985 SNORD45B-201ENST00000364617 72 ntBASIC1.4□□□□□ -2.19
TOP3BO95985 RNU6-1307P-201ENST00000391012 103 ntBASIC1.4□□□□□ -2.19
TOP3BO95985 MIR1302-4-201ENST00000408701 150 ntBASIC1.4□□□□□ -2.19
TOP3BO95985 RNU6-1086P-201ENST00000410930 100 ntBASIC1.4□□□□□ -2.19
TOP3BO95985 RNU7-61P-201ENST00000515897 61 ntBASIC1.4□□□□□ -2.19
TOP3BO95985 RNU7-79P-201ENST00000516082 62 ntBASIC1.4□□□□□ -2.19
TOP3BO95985 RNU6-947P-201ENST00000516264 106 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 202.2 ms