Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 MT-TN-201ENST00000387400 73 ntBASIC1.08□□□□□ -2.24
LMX1BO60663 SNORA75.2-201ENST00000391138 150 ntBASIC1.08□□□□□ -2.24
LMX1BO60663 SNORA75.3-201ENST00000391231 150 ntBASIC1.08□□□□□ -2.24
LMX1BO60663 AC096949.1-201ENST00000412047 152 ntBASIC1.08□□□□□ -2.24
LMX1BO60663 RNU7-79P-201ENST00000516082 62 ntBASIC1.08□□□□□ -2.24
LMX1BO60663 RN7SKP88-201ENST00000516847 250 ntBASIC1.08□□□□□ -2.24
LMX1BO60663 uc_338.28-201ENST00000612082 187 ntBASIC1.08□□□□□ -2.24
LMX1BO60663 7SK.8-201ENST00000612110 250 ntBASIC1.08□□□□□ -2.24
LMX1BO60663 7SK.11-201ENST00000615477 250 ntBASIC1.08□□□□□ -2.24
LMX1BO60663 7SK.13-201ENST00000622040 250 ntBASIC1.08□□□□□ -2.24
LMX1BO60663 AL162726.3-218ENST00000636401 95 ntBASIC1.08□□□□□ -2.24
LMX1BO60663 RNU6-363P-201ENST00000362895 105 ntBASIC1.07□□□□□ -2.24
LMX1BO60663 RNU6-147P-201ENST00000383983 107 ntBASIC1.07□□□□□ -2.24
LMX1BO60663 RNU6-1237P-201ENST00000384777 107 ntBASIC1.07□□□□□ -2.24
LMX1BO60663 RNU6-205P-201ENST00000390858 107 ntBASIC1.07□□□□□ -2.24
LMX1BO60663 RNU6-679P-201ENST00000391003 106 ntBASIC1.07□□□□□ -2.24
LMX1BO60663 SNORA40.6-201ENST00000391153 128 ntBASIC1.07□□□□□ -2.24
LMX1BO60663 RNU6-1086P-201ENST00000410930 100 ntBASIC1.07□□□□□ -2.24
LMX1BO60663 MTATP6P29-201ENST00000415057 132 ntBASIC1.07□□□□□ -2.24
LMX1BO60663 SNORA31.2-201ENST00000516019 134 ntBASIC1.07□□□□□ -2.24
LMX1BO60663 MIR2115-201ENST00000516657 100 ntBASIC1.07□□□□□ -2.24
LMX1BO60663 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.07□□□□□ -2.24
LMX1BO60663 AL662814.1-201ENST00000617364 121 ntBASIC1.07□□□□□ -2.24
LMX1BO60663 AL589743.1-201ENST00000551932 2712 ntBASIC1.07□□□□□ -2.24
LMX1BO60663 MIR377-201ENST00000362145 69 ntBASIC1.06□□□□□ -2.24
LMX1BO60663 MIR96-201ENST00000362288 78 ntBASIC1.06□□□□□ -2.24
LMX1BO60663 MIR588-201ENST00000384900 83 ntBASIC1.06□□□□□ -2.24
LMX1BO60663 RNU6-816P-201ENST00000390914 107 ntBASIC1.06□□□□□ -2.24
LMX1BO60663 RNU6-1268P-201ENST00000391214 107 ntBASIC1.06□□□□□ -2.24
LMX1BO60663 RNU6-1239P-201ENST00000391310 107 ntBASIC1.06□□□□□ -2.24
LMX1BO60663 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.06□□□□□ -2.24
LMX1BO60663 RNU6-412P-201ENST00000516434 106 ntBASIC1.06□□□□□ -2.24
LMX1BO60663 SNORD67.1-201ENST00000516618 108 ntBASIC1.06□□□□□ -2.24
LMX1BO60663 RNU6-537P-201ENST00000517277 103 ntBASIC1.06□□□□□ -2.24
LMX1BO60663 AC141846.1-201ENST00000568348 142 ntBASIC1.06□□□□□ -2.24
LMX1BO60663 MIR3613-201ENST00000579844 87 ntBASIC1.06□□□□□ -2.24
LMX1BO60663 MIR4264-201ENST00000583520 66 ntBASIC1.06□□□□□ -2.24
LMX1BO60663 MIR3660-201ENST00000584845 100 ntBASIC1.06□□□□□ -2.24
LMX1BO60663 SEPT14P17-201ENST00000617978 177 ntBASIC1.06□□□□□ -2.24
LMX1BO60663 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
LMX1BO60663 Y_RNA.163-201ENST00000363702 113 ntBASIC1.05□□□□□ -2.24
LMX1BO60663 MIR206-201ENST00000384872 86 ntBASIC1.05□□□□□ -2.24
LMX1BO60663 MIR605-201ENST00000385078 83 ntBASIC1.05□□□□□ -2.24
LMX1BO60663 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.05□□□□□ -2.24
LMX1BO60663 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.05□□□□□ -2.24
LMX1BO60663 RNU7-137P-201ENST00000516788 62 ntBASIC1.05□□□□□ -2.24
LMX1BO60663 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.05□□□□□ -2.24
LMX1BO60663 AC036111.3-201ENST00000526389 112 ntBASIC1.05□□□□□ -2.24
LMX1BO60663 AP000753.3-201ENST00000604083 169 ntBASIC1.05□□□□□ -2.24
LMX1BO60663 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.05□□□□□ -2.24
LMX1BO60663 MIR6515-201ENST00000619843 57 ntBASIC1.05□□□□□ -2.24
LMX1BO60663 Y_RNA.49-201ENST00000362714 112 ntBASIC1.04□□□□□ -2.24
LMX1BO60663 Y_RNA.168-201ENST00000363740 102 ntBASIC1.04□□□□□ -2.24
LMX1BO60663 RNU4-67P-201ENST00000364569 141 ntBASIC1.04□□□□□ -2.24
LMX1BO60663 Y_RNA.309-201ENST00000365046 111 ntBASIC1.04□□□□□ -2.24
LMX1BO60663 SNORD115-35-201ENST00000365122 82 ntBASIC1.04□□□□□ -2.24
LMX1BO60663 Y_RNA.328-201ENST00000365208 113 ntBASIC1.04□□□□□ -2.24
LMX1BO60663 SNORD26-201ENST00000384147 75 ntBASIC1.04□□□□□ -2.24
LMX1BO60663 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.04□□□□□ -2.24
LMX1BO60663 SNORA19.1-201ENST00000410656 129 ntBASIC1.04□□□□□ -2.24
LMX1BO60663 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.04□□□□□ -2.24
LMX1BO60663 snoU13.21-201ENST00000459368 105 ntBASIC1.04□□□□□ -2.24
LMX1BO60663 RNU7-21P-201ENST00000459430 62 ntBASIC1.04□□□□□ -2.24
LMX1BO60663 UBL5P1-201ENST00000507979 193 ntBASIC1.04□□□□□ -2.24
LMX1BO60663 SNORD79.1-201ENST00000516069 84 ntBASIC1.04□□□□□ -2.24
LMX1BO60663 RNU6-521P-201ENST00000516663 105 ntBASIC1.04□□□□□ -2.24
LMX1BO60663 RNA5SP480-201ENST00000516840 109 ntBASIC1.04□□□□□ -2.24
LMX1BO60663 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.04□□□□□ -2.24
LMX1BO60663 FAM71BP1-201ENST00000604431 523 ntBASIC1.04□□□□□ -2.24
LMX1BO60663 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
LMX1BO60663 MIR450A1-201ENST00000362262 91 ntBASIC1.03□□□□□ -2.24
LMX1BO60663 RNU1-93P-201ENST00000364704 169 ntBASIC1.03□□□□□ -2.24
LMX1BO60663 RNU6-949P-201ENST00000384040 107 ntBASIC1.03□□□□□ -2.24
LMX1BO60663 RNU6-939P-201ENST00000384634 107 ntBASIC1.03□□□□□ -2.24
LMX1BO60663 MIR577-201ENST00000385196 96 ntBASIC1.03□□□□□ -2.24
LMX1BO60663 RNU6-1165P-201ENST00000410119 107 ntBASIC1.03□□□□□ -2.24
LMX1BO60663 MIR1912-201ENST00000410389 80 ntBASIC1.03□□□□□ -2.24
LMX1BO60663 RNU7-62P-201ENST00000458856 62 ntBASIC1.03□□□□□ -2.24
LMX1BO60663 RNU7-2P-201ENST00000516096 62 ntBASIC1.03□□□□□ -2.24
LMX1BO60663 AC022709.1-201ENST00000615967 87 ntBASIC1.03□□□□□ -2.24
LMX1BO60663 MIR26B-201ENST00000362251 77 ntBASIC1.02□□□□□ -2.25
LMX1BO60663 RNA5SP327-201ENST00000362494 101 ntBASIC1.02□□□□□ -2.25
LMX1BO60663 SNORD114-10-201ENST00000363409 72 ntBASIC1.02□□□□□ -2.25
LMX1BO60663 RNU6-1099P-201ENST00000363533 107 ntBASIC1.02□□□□□ -2.25
LMX1BO60663 SNORD114-27-201ENST00000363766 70 ntBASIC1.02□□□□□ -2.25
LMX1BO60663 Y_RNA.360-201ENST00000365512 102 ntBASIC1.02□□□□□ -2.25
LMX1BO60663 MIR520E-201ENST00000384867 87 ntBASIC1.02□□□□□ -2.25
LMX1BO60663 RNU6-910P-201ENST00000390844 107 ntBASIC1.02□□□□□ -2.25
LMX1BO60663 RNU6-1321P-201ENST00000390905 107 ntBASIC1.02□□□□□ -2.25
LMX1BO60663 U8.15-201ENST00000390947 134 ntBASIC1.02□□□□□ -2.25
LMX1BO60663 SNORD77B-201ENST00000391112 67 ntBASIC1.02□□□□□ -2.25
LMX1BO60663 RNU6-904P-201ENST00000516206 101 ntBASIC1.02□□□□□ -2.25
LMX1BO60663 RNU6-1006P-201ENST00000516998 103 ntBASIC1.02□□□□□ -2.25
LMX1BO60663 AC105081.1-201ENST00000617727 106 ntBASIC1.02□□□□□ -2.25
LMX1BO60663 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
LMX1BO60663 RNU6-369P-201ENST00000362515 102 ntBASIC1.01□□□□□ -2.25
LMX1BO60663 Y_RNA.540-201ENST00000384638 111 ntBASIC1.01□□□□□ -2.25
LMX1BO60663 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
LMX1BO60663 MIR1285-1-201ENST00000408593 84 ntBASIC1.01□□□□□ -2.25
LMX1BO60663 SNORA7.5-201ENST00000410672 110 ntBASIC1.01□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms