Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
LDB2O43679 RNY1P13-201ENST00000365030 105 ntBASIC1.01□□□□□ -2.25
LDB2O43679 RNU6-949P-201ENST00000384040 107 ntBASIC1.01□□□□□ -2.25
LDB2O43679 MIR548A3-201ENST00000385297 97 ntBASIC1.01□□□□□ -2.25
LDB2O43679 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.01□□□□□ -2.25
LDB2O43679 RNU6-735P-201ENST00000410612 107 ntBASIC1.01□□□□□ -2.25
LDB2O43679 Y_RNA.649-201ENST00000459077 103 ntBASIC1.01□□□□□ -2.25
LDB2O43679 snoU13.21-201ENST00000459368 105 ntBASIC1.01□□□□□ -2.25
LDB2O43679 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
LDB2O43679 RNA5SP220-201ENST00000516298 104 ntBASIC1.01□□□□□ -2.25
LDB2O43679 RNA5SP404-201ENST00000517118 132 ntBASIC1.01□□□□□ -2.25
LDB2O43679 AL670379.3-201ENST00000605040 251 ntBASIC1.01□□□□□ -2.25
LDB2O43679 SNORD115-19-201ENST00000363098 82 ntBASIC1□□□□□ -2.25
LDB2O43679 SNORD115-18-201ENST00000363293 82 ntBASIC1□□□□□ -2.25
LDB2O43679 SNORD115-17-201ENST00000364612 82 ntBASIC1□□□□□ -2.25
LDB2O43679 RNU1-93P-201ENST00000364704 169 ntBASIC1□□□□□ -2.25
LDB2O43679 RNU6-934P-201ENST00000365154 107 ntBASIC1□□□□□ -2.25
LDB2O43679 RNU6-42P-201ENST00000384165 107 ntBASIC1□□□□□ -2.25
LDB2O43679 MIR520E-201ENST00000384867 87 ntBASIC1□□□□□ -2.25
LDB2O43679 MIR548D2-201ENST00000384955 97 ntBASIC1□□□□□ -2.25
LDB2O43679 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1□□□□□ -2.25
LDB2O43679 SNORD83.1-201ENST00000411362 77 ntBASIC1□□□□□ -2.25
LDB2O43679 RPS29P1-201ENST00000465274 159 ntBASIC1□□□□□ -2.25
LDB2O43679 AC087741.2-201ENST00000619415 172 ntBASIC1□□□□□ -2.25
LDB2O43679 RNU6-834P-201ENST00000362367 110 ntBASIC0.99□□□□□ -2.25
LDB2O43679 MIR200A-201ENST00000384875 90 ntBASIC0.99□□□□□ -2.25
LDB2O43679 RPL39P25-201ENST00000449384 154 ntBASIC0.99□□□□□ -2.25
LDB2O43679 AC067940.1-201ENST00000458411 300 ntBASIC0.99□□□□□ -2.25
LDB2O43679 snoU13.18-201ENST00000459483 104 ntBASIC0.99□□□□□ -2.25
LDB2O43679 MIR548AI-201ENST00000579940 88 ntBASIC0.99□□□□□ -2.25
LDB2O43679 FAM71BP1-201ENST00000604431 523 ntBASIC0.99□□□□□ -2.25
LDB2O43679 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
LDB2O43679 Y_RNA.291-201ENST00000364886 113 ntBASIC0.98□□□□□ -2.25
LDB2O43679 RPS26P5-201ENST00000418544 335 ntBASIC0.98□□□□□ -2.25
LDB2O43679 FABP5P4-201ENST00000437203 171 ntBASIC0.98□□□□□ -2.25
LDB2O43679 SNORD67.1-201ENST00000516618 108 ntBASIC0.98□□□□□ -2.25
LDB2O43679 RNU7-137P-201ENST00000516788 62 ntBASIC0.98□□□□□ -2.25
LDB2O43679 MIR4771-2-201ENST00000577758 74 ntBASIC0.98□□□□□ -2.25
LDB2O43679 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.98□□□□□ -2.25
LDB2O43679 MIR4771-1-201ENST00000582617 74 ntBASIC0.98□□□□□ -2.25
LDB2O43679 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.98□□□□□ -2.25
LDB2O43679 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.97□□□□□ -2.25
LDB2O43679 SNORD114-10-201ENST00000363409 72 ntBASIC0.97□□□□□ -2.25
LDB2O43679 RNU6-616P-201ENST00000384353 107 ntBASIC0.97□□□□□ -2.25
LDB2O43679 RNU6-476P-201ENST00000384726 107 ntBASIC0.97□□□□□ -2.25
LDB2O43679 MIR548A1-201ENST00000385041 97 ntBASIC0.97□□□□□ -2.25
LDB2O43679 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.97□□□□□ -2.25
LDB2O43679 AC007012.1-201ENST00000567192 175 ntBASIC0.97□□□□□ -2.25
LDB2O43679 MTND5P34-201ENST00000568888 325 ntBASIC0.97□□□□□ -2.25
LDB2O43679 MIR4679-2-201ENST00000578358 77 ntBASIC0.97□□□□□ -2.25
LDB2O43679 AC103810.9-201ENST00000606688 112 ntBASIC0.97□□□□□ -2.25
LDB2O43679 MIR6767-201ENST00000637302 66 ntBASIC0.97□□□□□ -2.25
LDB2O43679 AL391516.1-201ENST00000554380 2449 ntBASIC0.96□□□□□ -2.26
LDB2O43679 AC023934.1-201ENST00000574529 2389 ntBASIC0.96□□□□□ -2.26
LDB2O43679 Y_RNA.273-201ENST00000364703 102 ntBASIC0.96□□□□□ -2.26
LDB2O43679 Y_RNA.362-201ENST00000365518 110 ntBASIC0.96□□□□□ -2.26
LDB2O43679 RNU6-1144P-201ENST00000384247 104 ntBASIC0.96□□□□□ -2.26
LDB2O43679 U8.15-201ENST00000390947 134 ntBASIC0.96□□□□□ -2.26
LDB2O43679 MIR1257-201ENST00000408490 117 ntBASIC0.96□□□□□ -2.26
LDB2O43679 RNU6-1064P-201ENST00000410626 104 ntBASIC0.96□□□□□ -2.26
LDB2O43679 RNU7-185P-201ENST00000459215 60 ntBASIC0.96□□□□□ -2.26
LDB2O43679 SNORD124-201ENST00000459577 104 ntBASIC0.96□□□□□ -2.26
LDB2O43679 MIR1-1-201ENST00000362147 71 ntBASIC0.95□□□□□ -2.26
LDB2O43679 RNU6-369P-201ENST00000362515 102 ntBASIC0.95□□□□□ -2.26
LDB2O43679 SNORD114-24-201ENST00000365029 72 ntBASIC0.95□□□□□ -2.26
LDB2O43679 Y_RNA.344-201ENST00000365381 112 ntBASIC0.95□□□□□ -2.26
LDB2O43679 RNU6-1056P-201ENST00000383996 107 ntBASIC0.95□□□□□ -2.26
LDB2O43679 SNORD116-21-201ENST00000384507 92 ntBASIC0.95□□□□□ -2.26
LDB2O43679 RNU6-880P-201ENST00000384526 107 ntBASIC0.95□□□□□ -2.26
LDB2O43679 MIR942-201ENST00000401111 86 ntBASIC0.95□□□□□ -2.26
LDB2O43679 MIR1827-201ENST00000408549 66 ntBASIC0.95□□□□□ -2.26
LDB2O43679 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.95□□□□□ -2.26
LDB2O43679 Y_RNA.773-201ENST00000607168 90 ntBASIC0.95□□□□□ -2.26
LDB2O43679 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.95□□□□□ -2.26
LDB2O43679 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.95□□□□□ -2.26
LDB2O43679 RMST_2.1-201ENST00000617263 136 ntBASIC0.95□□□□□ -2.26
LDB2O43679 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.95□□□□□ -2.26
LDB2O43679 RNU1-36P-201ENST00000365130 165 ntBASIC0.94□□□□□ -2.26
LDB2O43679 MIR206-201ENST00000384872 86 ntBASIC0.94□□□□□ -2.26
LDB2O43679 MIR489-201ENST00000384923 84 ntBASIC0.94□□□□□ -2.26
LDB2O43679 MIR100-201ENST00000385259 80 ntBASIC0.94□□□□□ -2.26
LDB2O43679 SNORD93-201ENST00000408813 74 ntBASIC0.94□□□□□ -2.26
LDB2O43679 RNU6-447P-201ENST00000410293 104 ntBASIC0.94□□□□□ -2.26
LDB2O43679 RNU6-1118P-201ENST00000410382 104 ntBASIC0.94□□□□□ -2.26
LDB2O43679 RNU6-1076P-201ENST00000410397 104 ntBASIC0.94□□□□□ -2.26
LDB2O43679 RNU6-355P-201ENST00000410427 104 ntBASIC0.94□□□□□ -2.26
LDB2O43679 RNU6-791P-201ENST00000410467 104 ntBASIC0.94□□□□□ -2.26
LDB2O43679 RNU6-705P-201ENST00000410601 104 ntBASIC0.94□□□□□ -2.26
LDB2O43679 RNU6-1100P-201ENST00000410691 104 ntBASIC0.94□□□□□ -2.26
LDB2O43679 RNU6-860P-201ENST00000410860 104 ntBASIC0.94□□□□□ -2.26
LDB2O43679 RNU6-1217P-201ENST00000411276 104 ntBASIC0.94□□□□□ -2.26
LDB2O43679 RNU6-785P-201ENST00000411324 104 ntBASIC0.94□□□□□ -2.26
LDB2O43679 Y_RNA.629-201ENST00000411368 105 ntBASIC0.94□□□□□ -2.26
LDB2O43679 AC015818.7-201ENST00000428754 109 ntBASIC0.94□□□□□ -2.26
LDB2O43679 AC087499.7-201ENST00000441958 109 ntBASIC0.94□□□□□ -2.26
LDB2O43679 RNU7-2P-201ENST00000516096 62 ntBASIC0.94□□□□□ -2.26
LDB2O43679 MIR4676-201ENST00000583078 72 ntBASIC0.94□□□□□ -2.26
LDB2O43679 AC020891.4-201ENST00000605745 93 ntBASIC0.94□□□□□ -2.26
LDB2O43679 AL136317.1-201ENST00000612653 226 ntBASIC0.94□□□□□ -2.26
LDB2O43679 U6.90-201ENST00000614007 104 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 194.3 ms