Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 IGLL4P-201ENST00000614590 133 ntBASIC1.89□□□□□ -2.11
SRGAP3O43295 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
SRGAP3O43295 RNY1P13-201ENST00000365030 105 ntBASIC1.88□□□□□ -2.11
SRGAP3O43295 MIR17-201ENST00000385012 84 ntBASIC1.88□□□□□ -2.11
SRGAP3O43295 MIR517C-201ENST00000385103 95 ntBASIC1.88□□□□□ -2.11
SRGAP3O43295 U8.15-201ENST00000390947 134 ntBASIC1.88□□□□□ -2.11
SRGAP3O43295 RNU7-48P-201ENST00000458875 63 ntBASIC1.88□□□□□ -2.11
SRGAP3O43295 AC141846.1-201ENST00000568348 142 ntBASIC1.88□□□□□ -2.11
SRGAP3O43295 AC103810.7-201ENST00000607821 91 ntBASIC1.88□□□□□ -2.11
SRGAP3O43295 SEPT14P17-201ENST00000617978 177 ntBASIC1.88□□□□□ -2.11
SRGAP3O43295 MIR8063-201ENST00000621930 81 ntBASIC1.88□□□□□ -2.11
SRGAP3O43295 SNORA67.6-201ENST00000391093 99 ntBASIC1.87□□□□□ -2.11
SRGAP3O43295 MIR1304-201ENST00000408243 91 ntBASIC1.87□□□□□ -2.11
SRGAP3O43295 SPINT5P-201ENST00000448174 155 ntBASIC1.87□□□□□ -2.11
SRGAP3O43295 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.87□□□□□ -2.11
SRGAP3O43295 AL662814.1-201ENST00000617364 121 ntBASIC1.87□□□□□ -2.11
SRGAP3O43295 RNU6-1163P-201ENST00000364516 107 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 MIR548G-201ENST00000408442 89 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 RNU4-62P-201ENST00000410125 130 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 RNU6-447P-201ENST00000410293 104 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 RNU6-1118P-201ENST00000410382 104 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 RNU6-1076P-201ENST00000410397 104 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 RNU6-355P-201ENST00000410427 104 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 RNU6-791P-201ENST00000410467 104 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 RNU6-705P-201ENST00000410601 104 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 RNU6-402P-201ENST00000410678 103 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 RNU6-1100P-201ENST00000410691 104 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 RNU6-860P-201ENST00000410860 104 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 RNU6-1217P-201ENST00000411276 104 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 RNU6-785P-201ENST00000411324 104 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 AC022137.1-201ENST00000483735 151 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 AC133485.1-201ENST00000567176 124 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 AC015688.6-201ENST00000577737 104 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 MIR4713-201ENST00000582691 75 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 U6.90-201ENST00000614007 104 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 MIR8074-201ENST00000615081 81 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 U6.70-201ENST00000620287 104 ntBASIC1.86□□□□□ -2.11
SRGAP3O43295 WWP1P1-201ENST00000466609 2769 ntBASIC1.85□□□□□ -2.11
SRGAP3O43295 Y_RNA.73-201ENST00000362910 113 ntBASIC1.85□□□□□ -2.11
SRGAP3O43295 Y_RNA.98-201ENST00000363109 102 ntBASIC1.85□□□□□ -2.11
SRGAP3O43295 SNORD116-10-201ENST00000363791 102 ntBASIC1.85□□□□□ -2.11
SRGAP3O43295 SNORD116-22-201ENST00000384430 92 ntBASIC1.85□□□□□ -2.11
SRGAP3O43295 SNORD38.2-201ENST00000384470 69 ntBASIC1.85□□□□□ -2.11
SRGAP3O43295 AL354695.1-201ENST00000427935 228 ntBASIC1.85□□□□□ -2.11
SRGAP3O43295 HSPE1P24-201ENST00000450782 238 ntBASIC1.85□□□□□ -2.11
SRGAP3O43295 RNA5SP233-201ENST00000459153 113 ntBASIC1.85□□□□□ -2.11
SRGAP3O43295 SNORA31.24-201ENST00000517232 57 ntBASIC1.85□□□□□ -2.11
SRGAP3O43295 AP003327.1-201ENST00000529684 127 ntBASIC1.85□□□□□ -2.11
SRGAP3O43295 MTND5P40-201ENST00000559945 246 ntBASIC1.85□□□□□ -2.11
SRGAP3O43295 PRELID3BP2-201ENST00000605362 201 ntBASIC1.85□□□□□ -2.11
SRGAP3O43295 GHRLOS.1-201ENST00000610995 70 ntBASIC1.85□□□□□ -2.11
SRGAP3O43295 RNU6-1152P-201ENST00000384576 107 ntBASIC1.84□□□□□ -2.11
SRGAP3O43295 Y_RNA.567-201ENST00000384736 106 ntBASIC1.84□□□□□ -2.11
SRGAP3O43295 MIR588-201ENST00000384900 83 ntBASIC1.84□□□□□ -2.11
SRGAP3O43295 AC244023.1-201ENST00000426884 112 ntBASIC1.84□□□□□ -2.11
SRGAP3O43295 RPL39P39-201ENST00000455840 151 ntBASIC1.84□□□□□ -2.11
SRGAP3O43295 MIR4299-201ENST00000577899 72 ntBASIC1.84□□□□□ -2.11
SRGAP3O43295 SNORA77B-201ENST00000578179 125 ntBASIC1.84□□□□□ -2.11
SRGAP3O43295 AP000942.3-201ENST00000603702 160 ntBASIC1.84□□□□□ -2.11
SRGAP3O43295 AC242498.1-201ENST00000604134 111 ntBASIC1.84□□□□□ -2.11
SRGAP3O43295 RNU6-90P-201ENST00000606352 106 ntBASIC1.84□□□□□ -2.11
SRGAP3O43295 AP001362.1-201ENST00000625165 124 ntBASIC1.84□□□□□ -2.11
SRGAP3O43295 RNU6-497P-201ENST00000365316 104 ntBASIC1.83□□□□□ -2.12
SRGAP3O43295 Y_RNA.338-201ENST00000365320 114 ntBASIC1.83□□□□□ -2.12
SRGAP3O43295 RNU6-396P-201ENST00000365369 105 ntBASIC1.83□□□□□ -2.12
SRGAP3O43295 SNORD58A-201ENST00000383875 65 ntBASIC1.83□□□□□ -2.12
SRGAP3O43295 MIR320A-201ENST00000385302 82 ntBASIC1.83□□□□□ -2.12
SRGAP3O43295 AC019176.1-201ENST00000518519 225 ntBASIC1.83□□□□□ -2.12
SRGAP3O43295 RNU6-1244P-201ENST00000363614 108 ntBASIC1.82□□□□□ -2.12
SRGAP3O43295 Y_RNA.164-201ENST00000363709 102 ntBASIC1.82□□□□□ -2.12
SRGAP3O43295 RNU6-205P-201ENST00000390858 107 ntBASIC1.82□□□□□ -2.12
SRGAP3O43295 MIR1302-7-201ENST00000408841 72 ntBASIC1.82□□□□□ -2.12
SRGAP3O43295 snoU13.2-201ENST00000459201 104 ntBASIC1.82□□□□□ -2.12
SRGAP3O43295 AC023790.1-201ENST00000482174 347 ntBASIC1.82□□□□□ -2.12
SRGAP3O43295 RNU6-267P-201ENST00000516714 103 ntBASIC1.82□□□□□ -2.12
SRGAP3O43295 AL096840.1-201ENST00000603287 93 ntBASIC1.82□□□□□ -2.12
SRGAP3O43295 AP000753.3-201ENST00000604083 169 ntBASIC1.82□□□□□ -2.12
SRGAP3O43295 AC012676.2-201ENST00000619258 186 ntBASIC1.82□□□□□ -2.12
SRGAP3O43295 RNU6-949P-201ENST00000384040 107 ntBASIC1.81□□□□□ -2.12
SRGAP3O43295 RNU6-242P-201ENST00000384359 107 ntBASIC1.81□□□□□ -2.12
SRGAP3O43295 RNY1P4-201ENST00000384595 115 ntBASIC1.81□□□□□ -2.12
SRGAP3O43295 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.81□□□□□ -2.12
SRGAP3O43295 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.81□□□□□ -2.12
SRGAP3O43295 RNU1-98P-201ENST00000458992 160 ntBASIC1.81□□□□□ -2.12
SRGAP3O43295 AC005908.1-201ENST00000468701 347 ntBASIC1.81□□□□□ -2.12
SRGAP3O43295 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC1.81□□□□□ -2.12
SRGAP3O43295 Y_RNA.676-201ENST00000516393 96 ntBASIC1.81□□□□□ -2.12
SRGAP3O43295 MIR4668-201ENST00000582284 70 ntBASIC1.81□□□□□ -2.12
SRGAP3O43295 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
SRGAP3O43295 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
SRGAP3O43295 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.8□□□□□ -2.12
SRGAP3O43295 MIR6740-201ENST00000618268 113 ntBASIC1.8□□□□□ -2.12
SRGAP3O43295 AL161722.3-201ENST00000605789 2983 ntBASIC1.8□□□□□ -2.12
SRGAP3O43295 Y_RNA.219-201ENST00000364232 113 ntBASIC1.79□□□□□ -2.12
SRGAP3O43295 RNU6-675P-201ENST00000384236 104 ntBASIC1.79□□□□□ -2.12
SRGAP3O43295 RNU7-62P-201ENST00000458856 62 ntBASIC1.79□□□□□ -2.12
SRGAP3O43295 snoU13.9-201ENST00000458927 103 ntBASIC1.79□□□□□ -2.12
SRGAP3O43295 MIR2115-201ENST00000516657 100 ntBASIC1.79□□□□□ -2.12
SRGAP3O43295 MIR4264-201ENST00000583520 66 ntBASIC1.79□□□□□ -2.12
SRGAP3O43295 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms