Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 RNA5SP144-201ENST00000410846 116 ntBASIC0.21□□□□□ -2.38
MSH4O15457 AL512326.2-201ENST00000426359 151 ntBASIC0.21□□□□□ -2.38
MSH4O15457 RNU7-113P-201ENST00000459273 62 ntBASIC0.21□□□□□ -2.38
MSH4O15457 RNU6-1219P-201ENST00000516143 112 ntBASIC0.21□□□□□ -2.38
MSH4O15457 SNORA31.14-201ENST00000516728 116 ntBASIC0.21□□□□□ -2.38
MSH4O15457 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.21□□□□□ -2.38
MSH4O15457 MIR4431-201ENST00000579990 94 ntBASIC0.21□□□□□ -2.38
MSH4O15457 MIR6718-201ENST00000616153 80 ntBASIC0.21□□□□□ -2.38
MSH4O15457 RNU6-349P-201ENST00000362402 107 ntBASIC0.2□□□□□ -2.38
MSH4O15457 RNU6-508P-201ENST00000363231 103 ntBASIC0.2□□□□□ -2.38
MSH4O15457 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.2□□□□□ -2.38
MSH4O15457 RNU6-588P-201ENST00000410281 105 ntBASIC0.2□□□□□ -2.38
MSH4O15457 RNU5E-9P-201ENST00000411164 104 ntBASIC0.2□□□□□ -2.38
MSH4O15457 SNRPGP12-201ENST00000449481 213 ntBASIC0.2□□□□□ -2.38
MSH4O15457 RNA5SP33-201ENST00000516687 98 ntBASIC0.2□□□□□ -2.38
MSH4O15457 Y_RNA.697-201ENST00000516776 113 ntBASIC0.2□□□□□ -2.38
MSH4O15457 DEFB131E-201ENST00000532329 154 ntBASIC0.2□□□□□ -2.38
MSH4O15457 AC130289.1-201ENST00000577321 73 ntBASIC0.2□□□□□ -2.38
MSH4O15457 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.2□□□□□ -2.38
MSH4O15457 AL353621.2-201ENST00000605340 133 ntBASIC0.2□□□□□ -2.38
MSH4O15457 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.2□□□□□ -2.38
MSH4O15457 RNA5SP62-201ENST00000363457 110 ntBASIC0.19□□□□□ -2.38
MSH4O15457 RNU6-1020P-201ENST00000363684 107 ntBASIC0.19□□□□□ -2.38
MSH4O15457 RNY1P11-201ENST00000363759 113 ntBASIC0.19□□□□□ -2.38
MSH4O15457 Y_RNA.274-201ENST00000364714 101 ntBASIC0.19□□□□□ -2.38
MSH4O15457 RNU6-690P-201ENST00000365242 106 ntBASIC0.19□□□□□ -2.38
MSH4O15457 Y_RNA.452-201ENST00000384202 108 ntBASIC0.19□□□□□ -2.38
MSH4O15457 RNU6-291P-201ENST00000384720 107 ntBASIC0.19□□□□□ -2.38
MSH4O15457 RNU6-535P-201ENST00000384722 107 ntBASIC0.19□□□□□ -2.38
MSH4O15457 RNU6-469P-201ENST00000516253 101 ntBASIC0.19□□□□□ -2.38
MSH4O15457 RNU6-531P-201ENST00000516694 104 ntBASIC0.19□□□□□ -2.38
MSH4O15457 Y_RNA.30-201ENST00000362572 97 ntBASIC0.18□□□□□ -2.38
MSH4O15457 RNA5SP133-201ENST00000363368 119 ntBASIC0.18□□□□□ -2.38
MSH4O15457 SNORD118-201ENST00000363593 134 ntBASIC0.18□□□□□ -2.38
MSH4O15457 RNA5SP245-201ENST00000364239 121 ntBASIC0.18□□□□□ -2.38
MSH4O15457 RNU6-818P-201ENST00000364837 108 ntBASIC0.18□□□□□ -2.38
MSH4O15457 Y_RNA.435-201ENST00000384095 112 ntBASIC0.18□□□□□ -2.38
MSH4O15457 Y_RNA.515-201ENST00000384535 112 ntBASIC0.18□□□□□ -2.38
MSH4O15457 Y_RNA.536-201ENST00000384621 113 ntBASIC0.18□□□□□ -2.38
MSH4O15457 Y_RNA.793-201ENST00000411222 111 ntBASIC0.18□□□□□ -2.38
MSH4O15457 AL022718.1-201ENST00000412004 84 ntBASIC0.18□□□□□ -2.38
MSH4O15457 SUMO1P3-201ENST00000439961 304 ntBASIC0.18□□□□□ -2.38
MSH4O15457 RNU6-240P-201ENST00000516098 97 ntBASIC0.18□□□□□ -2.38
MSH4O15457 RNA5SP236-201ENST00000516169 116 ntBASIC0.18□□□□□ -2.38
MSH4O15457 RNU2-35P-201ENST00000516446 142 ntBASIC0.18□□□□□ -2.38
MSH4O15457 AP003327.1-201ENST00000529684 127 ntBASIC0.18□□□□□ -2.38
MSH4O15457 AC105081.1-201ENST00000617727 106 ntBASIC0.18□□□□□ -2.38
MSH4O15457 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.18□□□□□ -2.38
MSH4O15457 AC078938.1-201ENST00000620993 318 ntBASIC0.18□□□□□ -2.38
MSH4O15457 MIR3658-201ENST00000636291 56 ntBASIC0.18□□□□□ -2.38
MSH4O15457 MIR6844-201ENST00000637122 62 ntBASIC0.18□□□□□ -2.38
MSH4O15457 Y_RNA.120-201ENST00000363304 110 ntBASIC0.17□□□□□ -2.38
MSH4O15457 Y_RNA.233-201ENST00000364407 101 ntBASIC0.17□□□□□ -2.38
MSH4O15457 RNU6-463P-201ENST00000384340 107 ntBASIC0.17□□□□□ -2.38
MSH4O15457 Y_RNA.497-201ENST00000384447 98 ntBASIC0.17□□□□□ -2.38
MSH4O15457 AC069271.1-201ENST00000445577 156 ntBASIC0.17□□□□□ -2.38
MSH4O15457 RNU6-893P-201ENST00000458841 100 ntBASIC0.17□□□□□ -2.38
MSH4O15457 AC107027.2-201ENST00000512197 115 ntBASIC0.17□□□□□ -2.38
MSH4O15457 RNU6-1194P-201ENST00000516208 104 ntBASIC0.17□□□□□ -2.38
MSH4O15457 RNA5SP268-201ENST00000516828 124 ntBASIC0.17□□□□□ -2.38
MSH4O15457 RNU6-765P-201ENST00000516916 99 ntBASIC0.17□□□□□ -2.38
MSH4O15457 RNU7-35P-201ENST00000517174 62 ntBASIC0.17□□□□□ -2.38
MSH4O15457 MIR548AE2-201ENST00000583456 67 ntBASIC0.17□□□□□ -2.38
MSH4O15457 AC009779.6-201ENST00000603972 165 ntBASIC0.17□□□□□ -2.38
MSH4O15457 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.17□□□□□ -2.38
MSH4O15457 U6.109-201ENST00000636749 87 ntBASIC0.17□□□□□ -2.38
MSH4O15457 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.17□□□□□ -2.38
MSH4O15457 SNORA63.5-201ENST00000363548 123 ntBASIC0.16□□□□□ -2.38
MSH4O15457 Y_RNA.337-201ENST00000365312 102 ntBASIC0.16□□□□□ -2.38
MSH4O15457 RNU6-815P-201ENST00000384080 113 ntBASIC0.16□□□□□ -2.38
MSH4O15457 SNORD67.1-201ENST00000516618 108 ntBASIC0.16□□□□□ -2.38
MSH4O15457 RNU2-60P-201ENST00000517290 128 ntBASIC0.16□□□□□ -2.38
MSH4O15457 AL359881.1-201ENST00000602916 267 ntBASIC0.16□□□□□ -2.38
MSH4O15457 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC0.15□□□□□ -2.38
MSH4O15457 SNORD115-2-201ENST00000362842 82 ntBASIC0.15□□□□□ -2.39
MSH4O15457 Y_RNA.144-201ENST00000363521 113 ntBASIC0.15□□□□□ -2.39
MSH4O15457 RNU6-312P-201ENST00000364629 107 ntBASIC0.15□□□□□ -2.39
MSH4O15457 Y_RNA.297-201ENST00000364950 91 ntBASIC0.15□□□□□ -2.39
MSH4O15457 SNORD115-20-201ENST00000365099 82 ntBASIC0.15□□□□□ -2.39
MSH4O15457 Y_RNA.366-201ENST00000365540 102 ntBASIC0.15□□□□□ -2.39
MSH4O15457 Y_RNA.476-201ENST00000384347 108 ntBASIC0.15□□□□□ -2.39
MSH4O15457 Y_RNA.531-201ENST00000384589 121 ntBASIC0.15□□□□□ -2.39
MSH4O15457 RNA5SP63-201ENST00000391225 112 ntBASIC0.15□□□□□ -2.39
MSH4O15457 AC073261.1-201ENST00000429409 121 ntBASIC0.15□□□□□ -2.39
MSH4O15457 RNU6-863P-201ENST00000515989 104 ntBASIC0.15□□□□□ -2.39
MSH4O15457 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.15□□□□□ -2.39
MSH4O15457 MIR4305-201ENST00000583252 102 ntBASIC0.15□□□□□ -2.39
MSH4O15457 AC021443.1-201ENST00000604478 211 ntBASIC0.15□□□□□ -2.39
MSH4O15457 MIR7107-201ENST00000611489 80 ntBASIC0.15□□□□□ -2.39
MSH4O15457 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.15□□□□□ -2.39
MSH4O15457 AC141273.2-201ENST00000618989 130 ntBASIC0.15□□□□□ -2.39
MSH4O15457 Y_RNA.174-201ENST00000363781 105 ntBASIC0.14□□□□□ -2.39
MSH4O15457 RNU6-309P-201ENST00000364573 106 ntBASIC0.14□□□□□ -2.39
MSH4O15457 Y_RNA.357-201ENST00000365487 109 ntBASIC0.14□□□□□ -2.39
MSH4O15457 Y_RNA.423-201ENST00000384057 113 ntBASIC0.14□□□□□ -2.39
MSH4O15457 RNU6-187P-201ENST00000384139 106 ntBASIC0.14□□□□□ -2.39
MSH4O15457 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.14□□□□□ -2.39
MSH4O15457 SNORD37.2-201ENST00000391075 66 ntBASIC0.14□□□□□ -2.39
MSH4O15457 RNA5SP299-201ENST00000391203 116 ntBASIC0.14□□□□□ -2.39
MSH4O15457 SNORA75.5-201ENST00000391291 81 ntBASIC0.14□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 225.3 ms