Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 RNU6-480P-201ENST00000384332 107 ntBASIC2.21□□□□□ -2.06
SOX1O00570 MIR524-201ENST00000385242 87 ntBASIC2.21□□□□□ -2.06
SOX1O00570 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.21□□□□□ -2.06
SOX1O00570 Y_RNA.609-201ENST00000410669 89 ntBASIC2.21□□□□□ -2.06
SOX1O00570 AC244023.1-201ENST00000426884 112 ntBASIC2.21□□□□□ -2.06
SOX1O00570 RNU7-95P-201ENST00000459222 64 ntBASIC2.21□□□□□ -2.06
SOX1O00570 RNA5SP220-201ENST00000516298 104 ntBASIC2.21□□□□□ -2.06
SOX1O00570 SNORD111.1-201ENST00000516421 86 ntBASIC2.21□□□□□ -2.06
SOX1O00570 AC242498.1-201ENST00000604134 111 ntBASIC2.21□□□□□ -2.06
SOX1O00570 AL662814.1-201ENST00000617364 121 ntBASIC2.21□□□□□ -2.06
SOX1O00570 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
SOX1O00570 RNA5SP276-201ENST00000362580 94 ntBASIC2.2□□□□□ -2.06
SOX1O00570 RNU6-633P-201ENST00000362612 103 ntBASIC2.2□□□□□ -2.06
SOX1O00570 RNU6-509P-201ENST00000363519 107 ntBASIC2.2□□□□□ -2.06
SOX1O00570 RNU6-392P-201ENST00000364926 101 ntBASIC2.2□□□□□ -2.06
SOX1O00570 Y_RNA.327-201ENST00000365201 102 ntBASIC2.2□□□□□ -2.06
SOX1O00570 RNU6-949P-201ENST00000384040 107 ntBASIC2.2□□□□□ -2.06
SOX1O00570 Y_RNA.437-201ENST00000384113 113 ntBASIC2.2□□□□□ -2.06
SOX1O00570 SNORD41-201ENST00000386967 70 ntBASIC2.2□□□□□ -2.06
SOX1O00570 Y_RNA.611-201ENST00000410682 108 ntBASIC2.2□□□□□ -2.06
SOX1O00570 AC027119.1-201ENST00000440877 241 ntBASIC2.2□□□□□ -2.06
SOX1O00570 snoU13.2-201ENST00000459201 104 ntBASIC2.2□□□□□ -2.06
SOX1O00570 AL049779.4-201ENST00000604500 156 ntBASIC2.2□□□□□ -2.06
SOX1O00570 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
SOX1O00570 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
SOX1O00570 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.19□□□□□ -2.06
SOX1O00570 MIR8081-201ENST00000611533 95 ntBASIC2.19□□□□□ -2.06
SOX1O00570 MIR548BB-201ENST00000626714 66 ntBASIC2.19□□□□□ -2.06
SOX1O00570 RNY1P2-201ENST00000364820 117 ntBASIC2.18□□□□□ -2.06
SOX1O00570 Y_RNA.313-201ENST00000365095 103 ntBASIC2.18□□□□□ -2.06
SOX1O00570 RNU6-396P-201ENST00000365369 105 ntBASIC2.18□□□□□ -2.06
SOX1O00570 MIR181B2-201ENST00000385004 89 ntBASIC2.18□□□□□ -2.06
SOX1O00570 RNA5SP181-201ENST00000410246 98 ntBASIC2.18□□□□□ -2.06
SOX1O00570 AL161932.1-201ENST00000437408 146 ntBASIC2.18□□□□□ -2.06
SOX1O00570 RPS29P11-201ENST00000496507 171 ntBASIC2.18□□□□□ -2.06
SOX1O00570 RNU6-922P-201ENST00000516753 99 ntBASIC2.18□□□□□ -2.06
SOX1O00570 MIR3192-201ENST00000584920 77 ntBASIC2.18□□□□□ -2.06
SOX1O00570 AL137847.3-201ENST00000611521 109 ntBASIC2.18□□□□□ -2.06
SOX1O00570 AL773524.1-201ENST00000614065 229 ntBASIC2.18□□□□□ -2.06
SOX1O00570 PVT1_3.1-201ENST00000620853 95 ntBASIC2.18□□□□□ -2.06
SOX1O00570 HSBP1P2-201ENST00000299671 229 ntBASIC2.17□□□□□ -2.06
SOX1O00570 MIR6073-201ENST00000352083 89 ntBASIC2.17□□□□□ -2.06
SOX1O00570 SNORA6-201ENST00000384033 151 ntBASIC2.17□□□□□ -2.06
SOX1O00570 RNU6-279P-201ENST00000391297 101 ntBASIC2.17□□□□□ -2.06
SOX1O00570 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC2.17□□□□□ -2.06
SOX1O00570 AL513043.2-201ENST00000573941 143 ntBASIC2.17□□□□□ -2.06
SOX1O00570 GHRLOS.1-201ENST00000610995 70 ntBASIC2.17□□□□□ -2.06
SOX1O00570 AC006160.2-201ENST00000637708 154 ntBASIC2.17□□□□□ -2.06
SOX1O00570 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
SOX1O00570 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
SOX1O00570 Y_RNA.178-201ENST00000363832 102 ntBASIC2.16□□□□□ -2.06
SOX1O00570 SNORA2B-201ENST00000384583 137 ntBASIC2.16□□□□□ -2.06
SOX1O00570 MIR588-201ENST00000384900 83 ntBASIC2.16□□□□□ -2.06
SOX1O00570 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.16□□□□□ -2.06
SOX1O00570 RNU6-613P-201ENST00000410412 108 ntBASIC2.16□□□□□ -2.06
SOX1O00570 HSPE1P24-201ENST00000450782 238 ntBASIC2.16□□□□□ -2.06
SOX1O00570 AL096861.1-201ENST00000610899 123 ntBASIC2.16□□□□□ -2.06
SOX1O00570 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
SOX1O00570 RNU6-439P-201ENST00000384188 106 ntBASIC2.15□□□□□ -2.07
SOX1O00570 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
SOX1O00570 MIR1302-7-201ENST00000408841 72 ntBASIC2.15□□□□□ -2.07
SOX1O00570 Y_RNA.607-201ENST00000410597 98 ntBASIC2.15□□□□□ -2.07
SOX1O00570 AC015688.6-201ENST00000577737 104 ntBASIC2.15□□□□□ -2.07
SOX1O00570 SNORA77B-201ENST00000578179 125 ntBASIC2.15□□□□□ -2.07
SOX1O00570 SNRPGP19-201ENST00000603826 189 ntBASIC2.15□□□□□ -2.07
SOX1O00570 AP000753.3-201ENST00000604083 169 ntBASIC2.15□□□□□ -2.07
SOX1O00570 AC022709.1-201ENST00000615967 87 ntBASIC2.15□□□□□ -2.07
SOX1O00570 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
SOX1O00570 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
SOX1O00570 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
SOX1O00570 MIR563-201ENST00000385080 79 ntBASIC2.14□□□□□ -2.07
SOX1O00570 RNA5SP82-201ENST00000516707 92 ntBASIC2.14□□□□□ -2.07
SOX1O00570 RNU6-250P-201ENST00000516958 103 ntBASIC2.14□□□□□ -2.07
SOX1O00570 SNORD114-22-201ENST00000365423 72 ntBASIC2.13□□□□□ -2.07
SOX1O00570 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
SOX1O00570 AC244636.1-201ENST00000421152 228 ntBASIC2.13□□□□□ -2.07
SOX1O00570 RNA5SP102-201ENST00000516865 106 ntBASIC2.13□□□□□ -2.07
SOX1O00570 MIR4264-201ENST00000583520 66 ntBASIC2.13□□□□□ -2.07
SOX1O00570 MIR8074-201ENST00000615081 81 ntBASIC2.13□□□□□ -2.07
SOX1O00570 AC084768.2-201ENST00000622736 221 ntBASIC2.13□□□□□ -2.07
SOX1O00570 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.13□□□□□ -2.07
SOX1O00570 Y_RNA.168-201ENST00000363740 102 ntBASIC2.12□□□□□ -2.07
SOX1O00570 Y_RNA.244-201ENST00000364484 109 ntBASIC2.12□□□□□ -2.07
SOX1O00570 AL133373.1-201ENST00000497098 94 ntBASIC2.12□□□□□ -2.07
SOX1O00570 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.12□□□□□ -2.07
SOX1O00570 AC020891.4-201ENST00000605745 93 ntBASIC2.12□□□□□ -2.07
SOX1O00570 MIR8066-201ENST00000617280 78 ntBASIC2.12□□□□□ -2.07
SOX1O00570 MIR6515-201ENST00000619843 57 ntBASIC2.12□□□□□ -2.07
SOX1O00570 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SOX1O00570 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
SOX1O00570 Y_RNA.205-201ENST00000364128 113 ntBASIC2.11□□□□□ -2.07
SOX1O00570 MIR9-3-201ENST00000385084 90 ntBASIC2.11□□□□□ -2.07
SOX1O00570 MT-TN-201ENST00000387400 73 ntBASIC2.11□□□□□ -2.07
SOX1O00570 SNORA67.5-201ENST00000391036 107 ntBASIC2.11□□□□□ -2.07
SOX1O00570 SNORA48.3-201ENST00000391081 134 ntBASIC2.11□□□□□ -2.07
SOX1O00570 MIR2115-201ENST00000516657 100 ntBASIC2.11□□□□□ -2.07
SOX1O00570 AC138749.4-201ENST00000563970 127 ntBASIC2.11□□□□□ -2.07
SOX1O00570 MIR4500-201ENST00000579472 76 ntBASIC2.11□□□□□ -2.07
SOX1O00570 MIR4713-201ENST00000582691 75 ntBASIC2.11□□□□□ -2.07
SOX1O00570 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 210.7 ms