Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RNU7-120P-201ENST00000459334 63 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RN7SKP12-201ENST00000516275 143 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU2-35P-201ENST00000516446 142 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU7-35P-201ENST00000517174 62 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 AC072026.1-201ENST00000605023 201 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 U6.90-201ENST00000614007 104 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 U6.70-201ENST00000620287 104 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.13-201ENST00000362403 112 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.120-201ENST00000363304 110 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORA36.2-201ENST00000384004 127 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-364P-201ENST00000384387 107 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 snosnR66.1-201ENST00000391095 99 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORD93-201ENST00000408813 74 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR1197-201ENST00000408818 88 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.793-201ENST00000411222 111 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC107027.2-201ENST00000512197 115 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-448P-201ENST00000517052 107 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORA81.3-201ENST00000517283 198 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR3646-201ENST00000578301 84 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 uc_338.16-201ENST00000621804 95 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORA36.1-201ENST00000363424 132 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNA5SP517-201ENST00000364724 117 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.337-201ENST00000365312 102 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.366-201ENST00000365540 102 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.401-201ENST00000383965 117 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORA20-201ENST00000384662 132 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORA75.5-201ENST00000391291 81 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU4-83P-201ENST00000410863 133 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU7-197P-201ENST00000458836 62 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC074198.2-201ENST00000508153 258 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU7-79P-201ENST00000516082 62 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-861P-201ENST00000516745 106 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR3678-201ENST00000578455 94 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR6082-201ENST00000613604 109 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU4-45P-201ENST00000365469 141 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.357-201ENST00000365487 109 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNA5SP237-201ENST00000410414 113 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-1135P-201ENST00000411083 103 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNA5SP94-201ENST00000516917 108 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU7-70P-201ENST00000516941 66 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 AP002392.1-201ENST00000537692 208 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 AL359881.1-201ENST00000602916 267 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC023932.2-201ENST00000603176 175 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR6844-201ENST00000637122 62 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.30-201ENST00000362572 97 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNA5SP257-201ENST00000363023 116 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-309P-201ENST00000364573 106 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.785-201ENST00000384290 109 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.531-201ENST00000384589 121 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.686-201ENST00000516548 134 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORA25.16-201ENST00000516741 121 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-765P-201ENST00000516916 99 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 AP003327.1-201ENST00000529684 127 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR4305-201ENST00000583252 102 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.32-201ENST00000362589 110 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORD44.1-201ENST00000363202 61 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-1318P-201ENST00000365389 103 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.552-201ENST00000384665 112 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR644A-201ENST00000385262 94 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-893P-201ENST00000458841 100 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-240P-201ENST00000516098 97 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR548AE2-201ENST00000583456 67 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 DNAJC19P2-201ENST00000593340 302 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC011603.4-201ENST00000611325 277 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC004792.1-201ENST00000614523 137 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORD118-201ENST00000363593 134 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.257-201ENST00000364596 102 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.476-201ENST00000384347 108 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.515-201ENST00000384535 112 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-291P-201ENST00000384720 107 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-679P-201ENST00000391003 106 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 PCNPP3-201ENST00000393579 471 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-394P-201ENST00000410735 107 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU7-113P-201ENST00000459273 62 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.681-201ENST00000516445 113 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORA31.14-201ENST00000516728 116 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU7-137P-201ENST00000516788 62 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.700-201ENST00000516806 100 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC133485.4-201ENST00000561835 220 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 MTND5P34-201ENST00000568888 325 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC108081.1-201ENST00000604358 221 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-403P-201ENST00000363163 104 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNA5SP245-201ENST00000364239 121 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.272-201ENST00000364696 102 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-690P-201ENST00000365242 106 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR518A1-201ENST00000385068 85 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNA5SP63-201ENST00000391225 112 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 AL603914.1-201ENST00000401964 204 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 AL022718.1-201ENST00000412004 84 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU7-123P-201ENST00000515911 60 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-863P-201ENST00000515989 104 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORD67.1-201ENST00000516618 108 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNA5SP33-201ENST00000516687 98 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 175.6 ms