Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RNU7-120P-201ENST00000459334 63 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RN7SKP12-201ENST00000516275 143 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU2-35P-201ENST00000516446 142 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 RNU7-35P-201ENST00000517174 62 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 AC072026.1-201ENST00000605023 201 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 U6.90-201ENST00000614007 104 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 U6.70-201ENST00000620287 104 ntBASIC0.35□□□□□ -2.35
TMX2-CTNND1H3BSU7 Y_RNA.13-201ENST00000362403 112 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.120-201ENST00000363304 110 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORA36.2-201ENST00000384004 127 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-364P-201ENST00000384387 107 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 snosnR66.1-201ENST00000391095 99 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORD93-201ENST00000408813 74 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR1197-201ENST00000408818 88 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.793-201ENST00000411222 111 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC107027.2-201ENST00000512197 115 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORA68.3-201ENST00000515906 83 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-448P-201ENST00000517052 107 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORA81.3-201ENST00000517283 198 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR3646-201ENST00000578301 84 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 uc_338.16-201ENST00000621804 95 ntBASIC0.34□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORA36.1-201ENST00000363424 132 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNA5SP517-201ENST00000364724 117 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.337-201ENST00000365312 102 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.366-201ENST00000365540 102 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.401-201ENST00000383965 117 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORA20-201ENST00000384662 132 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORA75.5-201ENST00000391291 81 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU4-83P-201ENST00000410863 133 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU7-197P-201ENST00000458836 62 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC074198.2-201ENST00000508153 258 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU7-79P-201ENST00000516082 62 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-861P-201ENST00000516745 106 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR3678-201ENST00000578455 94 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR6082-201ENST00000613604 109 ntBASIC0.33□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU4-45P-201ENST00000365469 141 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.357-201ENST00000365487 109 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNA5SP237-201ENST00000410414 113 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-1135P-201ENST00000411083 103 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNA5SP94-201ENST00000516917 108 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU7-70P-201ENST00000516941 66 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 AP002392.1-201ENST00000537692 208 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 AL359881.1-201ENST00000602916 267 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC023932.2-201ENST00000603176 175 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR6844-201ENST00000637122 62 ntBASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.32□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.30-201ENST00000362572 97 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNA5SP257-201ENST00000363023 116 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-309P-201ENST00000364573 106 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.785-201ENST00000384290 109 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.531-201ENST00000384589 121 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.686-201ENST00000516548 134 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORA25.16-201ENST00000516741 121 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-765P-201ENST00000516916 99 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 AP003327.1-201ENST00000529684 127 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR4305-201ENST00000583252 102 ntBASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.31□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIRLET7D-201ENST00000362263 87 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.32-201ENST00000362589 110 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORD44.1-201ENST00000363202 61 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-1318P-201ENST00000365389 103 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.552-201ENST00000384665 112 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR644A-201ENST00000385262 94 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-893P-201ENST00000458841 100 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-240P-201ENST00000516098 97 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR548AE2-201ENST00000583456 67 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 DNAJC19P2-201ENST00000593340 302 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC011603.4-201ENST00000611325 277 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC004792.1-201ENST00000614523 137 ntBASIC0.3□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORD118-201ENST00000363593 134 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.257-201ENST00000364596 102 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.476-201ENST00000384347 108 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.515-201ENST00000384535 112 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-291P-201ENST00000384720 107 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-679P-201ENST00000391003 106 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 PCNPP3-201ENST00000393579 471 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-394P-201ENST00000410735 107 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU7-113P-201ENST00000459273 62 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.681-201ENST00000516445 113 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORA31.14-201ENST00000516728 116 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU7-137P-201ENST00000516788 62 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.700-201ENST00000516806 100 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC133485.4-201ENST00000561835 220 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 MTND5P34-201ENST00000568888 325 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 AC108081.1-201ENST00000604358 221 ntBASIC0.29□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-403P-201ENST00000363163 104 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNA5SP245-201ENST00000364239 121 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 Y_RNA.272-201ENST00000364696 102 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-690P-201ENST00000365242 106 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 MIR518A1-201ENST00000385068 85 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNA5SP63-201ENST00000391225 112 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 AL603914.1-201ENST00000401964 204 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 AL022718.1-201ENST00000412004 84 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU7-123P-201ENST00000515911 60 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNU6-863P-201ENST00000515989 104 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 SNORD67.1-201ENST00000516618 108 ntBASIC0.28□□□□□ -2.36
TMX2-CTNND1H3BSU7 RNA5SP33-201ENST00000516687 98 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 279.9 ms