Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 RNU6-1184P-201ENST00000384588 108 ntBASIC2.65□□□□□ -1.99
H3BM21 SNORA67.4-201ENST00000384688 142 ntBASIC2.65□□□□□ -1.99
H3BM21 MIR588-201ENST00000384900 83 ntBASIC2.65□□□□□ -1.99
H3BM21 MIR466-201ENST00000580653 84 ntBASIC2.65□□□□□ -1.99
H3BM21 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.65□□□□□ -1.99
H3BM21 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
H3BM21 SNORA24B-201ENST00000384176 131 ntBASIC2.64□□□□□ -1.99
H3BM21 AC244023.1-201ENST00000426884 112 ntBASIC2.64□□□□□ -1.99
H3BM21 RNU11-2P-201ENST00000516898 142 ntBASIC2.64□□□□□ -1.99
H3BM21 SUB1P4-201ENST00000566062 339 ntBASIC2.64□□□□□ -1.99
H3BM21 MIR5194-201ENST00000582634 120 ntBASIC2.64□□□□□ -1.99
H3BM21 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.64□□□□□ -1.99
H3BM21 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.64□□□□□ -1.99
H3BM21 AC242498.1-201ENST00000604134 111 ntBASIC2.64□□□□□ -1.99
H3BM21 MIR6817-201ENST00000615588 66 ntBASIC2.64□□□□□ -1.99
H3BM21 RNU6-446P-201ENST00000362827 106 ntBASIC2.63□□□□□ -1.99
H3BM21 AL606490.4-201ENST00000423117 127 ntBASIC2.63□□□□□ -1.99
H3BM21 AL513328.1-201ENST00000446460 224 ntBASIC2.63□□□□□ -1.99
H3BM21 RNU7-26P-201ENST00000458980 63 ntBASIC2.63□□□□□ -1.99
H3BM21 RNU6-237P-201ENST00000515985 71 ntBASIC2.63□□□□□ -1.99
H3BM21 SNORA31.15-201ENST00000516771 132 ntBASIC2.63□□□□□ -1.99
H3BM21 MIR4709-201ENST00000577272 72 ntBASIC2.63□□□□□ -1.99
H3BM21 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.63□□□□□ -1.99
H3BM21 DLEU2_3.1-201ENST00000620005 73 ntBASIC2.63□□□□□ -1.99
H3BM21 TRDV1-202ENST00000621643 102 ntBASIC2.63□□□□□ -1.99
H3BM21 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
H3BM21 Z82195.2-201ENST00000612348 18351 ntBASIC2.62□□□□□ -1.99
H3BM21 RNA5SP68-201ENST00000363885 119 ntBASIC2.62□□□□□ -1.99
H3BM21 MIR563-201ENST00000385080 79 ntBASIC2.62□□□□□ -1.99
H3BM21 AC099513.1-201ENST00000490423 301 ntBASIC2.62□□□□□ -1.99
H3BM21 AC026271.5-201ENST00000577873 130 ntBASIC2.62□□□□□ -1.99
H3BM21 MIR4635-201ENST00000583759 79 ntBASIC2.62□□□□□ -1.99
H3BM21 FO624990.1-201ENST00000636373 85 ntBASIC2.62□□□□□ -1.99
H3BM21 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
H3BM21 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
H3BM21 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
H3BM21 RNU6-664P-201ENST00000362381 107 ntBASIC2.61□□□□□ -1.99
H3BM21 SNORD101-201ENST00000384027 73 ntBASIC2.61□□□□□ -1.99
H3BM21 SUMO1P4-201ENST00000429430 302 ntBASIC2.61□□□□□ -1.99
H3BM21 AC009474.2-201ENST00000451383 136 ntBASIC2.61□□□□□ -1.99
H3BM21 RNU7-41P-201ENST00000515917 61 ntBASIC2.61□□□□□ -1.99
H3BM21 RNU6-531P-201ENST00000516694 104 ntBASIC2.61□□□□□ -1.99
H3BM21 AC010297.1-201ENST00000623948 149 ntBASIC2.61□□□□□ -1.99
H3BM21 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.6□□□□□ -1.99
H3BM21 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
H3BM21 MIR30D-201ENST00000362283 70 ntBASIC2.6□□□□□ -1.99
H3BM21 SNORA25.5-201ENST00000363782 126 ntBASIC2.6□□□□□ -1.99
H3BM21 RNU1-138P-201ENST00000384093 164 ntBASIC2.6□□□□□ -1.99
H3BM21 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.6□□□□□ -1.99
H3BM21 BX510359.4-201ENST00000423750 193 ntBASIC2.6□□□□□ -1.99
H3BM21 RNU7-195P-201ENST00000458793 62 ntBASIC2.6□□□□□ -1.99
H3BM21 RNU6-982P-201ENST00000516216 102 ntBASIC2.6□□□□□ -1.99
H3BM21 RNA5SP282-201ENST00000516355 108 ntBASIC2.6□□□□□ -1.99
H3BM21 RNA5SP148-201ENST00000516527 94 ntBASIC2.6□□□□□ -1.99
H3BM21 RNA5SP437-201ENST00000517249 129 ntBASIC2.6□□□□□ -1.99
H3BM21 MIR4696-201ENST00000581431 70 ntBASIC2.6□□□□□ -1.99
H3BM21 AL049779.4-201ENST00000604500 156 ntBASIC2.6□□□□□ -1.99
H3BM21 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -1.99
H3BM21 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.59□□□□□ -1.99
H3BM21 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.59□□□□□ -1.99
H3BM21 MIR424-201ENST00000362227 98 ntBASIC2.59□□□□□ -1.99
H3BM21 RNU6-940P-201ENST00000363433 104 ntBASIC2.59□□□□□ -1.99
H3BM21 RNA5SP192-201ENST00000364404 120 ntBASIC2.59□□□□□ -1.99
H3BM21 MIR520A-201ENST00000384862 85 ntBASIC2.59□□□□□ -1.99
H3BM21 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.59□□□□□ -1.99
H3BM21 RNU6-542P-201ENST00000516405 103 ntBASIC2.59□□□□□ -1.99
H3BM21 RNU6-1057P-201ENST00000517162 102 ntBASIC2.59□□□□□ -1.99
H3BM21 MIR6740-201ENST00000618268 113 ntBASIC2.59□□□□□ -1.99
H3BM21 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
H3BM21 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
H3BM21 RNU4-58P-201ENST00000363192 141 ntBASIC2.58□□□□□ -2
H3BM21 RNU6-654P-201ENST00000364373 107 ntBASIC2.58□□□□□ -2
H3BM21 SNORD113-4-201ENST00000364802 75 ntBASIC2.58□□□□□ -2
H3BM21 RNU6-53P-201ENST00000365367 106 ntBASIC2.58□□□□□ -2
H3BM21 MIR29C-201ENST00000385231 88 ntBASIC2.58□□□□□ -2
H3BM21 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.58□□□□□ -2
H3BM21 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.58□□□□□ -2
H3BM21 U6.100-201ENST00000636230 99 ntBASIC2.58□□□□□ -2
H3BM21 MIR4773-1-201ENST00000637203 78 ntBASIC2.58□□□□□ -2
H3BM21 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.57□□□□□ -2
H3BM21 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.57□□□□□ -2
H3BM21 MIR597-201ENST00000384968 97 ntBASIC2.57□□□□□ -2
H3BM21 RNU6-1052P-201ENST00000411398 104 ntBASIC2.57□□□□□ -2
H3BM21 snoU13.27-201ENST00000459278 104 ntBASIC2.57□□□□□ -2
H3BM21 RNU1-41P-201ENST00000516161 162 ntBASIC2.57□□□□□ -2
H3BM21 RNU1-48P-201ENST00000516400 162 ntBASIC2.57□□□□□ -2
H3BM21 RNU6-719P-201ENST00000516671 104 ntBASIC2.57□□□□□ -2
H3BM21 SNORA25.16-201ENST00000516741 121 ntBASIC2.57□□□□□ -2
H3BM21 RNA5SP137-201ENST00000516833 135 ntBASIC2.57□□□□□ -2
H3BM21 MIR4446-201ENST00000578505 67 ntBASIC2.57□□□□□ -2
H3BM21 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
H3BM21 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
H3BM21 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.56□□□□□ -2
H3BM21 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
H3BM21 AL596028.1-201ENST00000326971 197 ntBASIC2.56□□□□□ -2
H3BM21 RNU6-274P-201ENST00000459566 107 ntBASIC2.56□□□□□ -2
H3BM21 TRAJ51-201ENST00000504127 63 ntBASIC2.56□□□□□ -2
H3BM21 RNU6-752P-201ENST00000516376 102 ntBASIC2.56□□□□□ -2
H3BM21 MIR3670-2-201ENST00000582974 65 ntBASIC2.56□□□□□ -2
H3BM21 MIR3670-1-201ENST00000584160 65 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 213.7 ms