Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 RNU6-1229P-201ENST00000364295 107 ntBASIC1.96□□□□□ -2.1
U3KQE9 Y_RNA.333-201ENST00000365274 102 ntBASIC1.96□□□□□ -2.1
U3KQE9 RNU4-83P-201ENST00000410863 133 ntBASIC1.96□□□□□ -2.1
U3KQE9 RNU7-62P-201ENST00000458856 62 ntBASIC1.96□□□□□ -2.1
U3KQE9 RNA5SP445-201ENST00000515889 115 ntBASIC1.96□□□□□ -2.1
U3KQE9 RNU6-1194P-201ENST00000516208 104 ntBASIC1.96□□□□□ -2.1
U3KQE9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
U3KQE9 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
U3KQE9 RNU6-859P-201ENST00000362728 107 ntBASIC1.95□□□□□ -2.1
U3KQE9 RNU4-32P-201ENST00000363404 141 ntBASIC1.95□□□□□ -2.1
U3KQE9 RNU6-1254P-201ENST00000391266 104 ntBASIC1.95□□□□□ -2.1
U3KQE9 RNU7-85P-201ENST00000458851 63 ntBASIC1.95□□□□□ -2.1
U3KQE9 AL133373.1-201ENST00000497098 94 ntBASIC1.95□□□□□ -2.1
U3KQE9 AL049779.4-201ENST00000604500 156 ntBASIC1.95□□□□□ -2.1
U3KQE9 AL033523.1-201ENST00000605153 153 ntBASIC1.95□□□□□ -2.1
U3KQE9 AC016717.2-201ENST00000609089 5141 ntBASIC1.95□□□□□ -2.1
U3KQE9 AC131280.1-202ENST00000624067 4211 ntBASIC1.95□□□□□ -2.1
U3KQE9 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
U3KQE9 RNA5SP456-201ENST00000364002 114 ntBASIC1.94□□□□□ -2.1
U3KQE9 SNORA67.1-201ENST00000364749 141 ntBASIC1.94□□□□□ -2.1
U3KQE9 SNORD23.1-201ENST00000408212 104 ntBASIC1.94□□□□□ -2.1
U3KQE9 SNORD109B-201ENST00000458961 67 ntBASIC1.94□□□□□ -2.1
U3KQE9 SNORD109A-201ENST00000459128 67 ntBASIC1.94□□□□□ -2.1
U3KQE9 AP003716.2-201ENST00000528260 108 ntBASIC1.94□□□□□ -2.1
U3KQE9 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.94□□□□□ -2.1
U3KQE9 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
U3KQE9 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.94□□□□□ -2.1
U3KQE9 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.93□□□□□ -2.1
U3KQE9 MIR6073-201ENST00000352083 89 ntBASIC1.93□□□□□ -2.1
U3KQE9 RNU4-58P-201ENST00000363192 141 ntBASIC1.93□□□□□ -2.1
U3KQE9 SNORA25.9-201ENST00000365087 128 ntBASIC1.93□□□□□ -2.1
U3KQE9 RNU6-811P-201ENST00000384069 107 ntBASIC1.93□□□□□ -2.1
U3KQE9 Y_RNA.508-201ENST00000384502 114 ntBASIC1.93□□□□□ -2.1
U3KQE9 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC1.93□□□□□ -2.1
U3KQE9 AC244636.1-201ENST00000421152 228 ntBASIC1.93□□□□□ -2.1
U3KQE9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.93□□□□□ -2.1
U3KQE9 MIR18B-201ENST00000454574 71 ntBASIC1.93□□□□□ -2.1
U3KQE9 RNU7-153P-201ENST00000516455 62 ntBASIC1.93□□□□□ -2.1
U3KQE9 MIR4796-201ENST00000580742 81 ntBASIC1.93□□□□□ -2.1
U3KQE9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC1.93□□□□□ -2.1
U3KQE9 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
U3KQE9 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
U3KQE9 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
U3KQE9 RNU6-686P-201ENST00000364839 107 ntBASIC1.92□□□□□ -2.1
U3KQE9 MIR27B-201ENST00000385129 97 ntBASIC1.92□□□□□ -2.1
U3KQE9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
U3KQE9 RNU6-243P-201ENST00000391140 107 ntBASIC1.92□□□□□ -2.1
U3KQE9 SNORA77B-201ENST00000578179 125 ntBASIC1.92□□□□□ -2.1
U3KQE9 MIR4713-201ENST00000582691 75 ntBASIC1.92□□□□□ -2.1
U3KQE9 SNORD92-201ENST00000585078 85 ntBASIC1.92□□□□□ -2.1
U3KQE9 SNRPGP19-201ENST00000603826 189 ntBASIC1.92□□□□□ -2.1
U3KQE9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
U3KQE9 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
U3KQE9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
U3KQE9 AL596028.1-201ENST00000326971 197 ntBASIC1.91□□□□□ -2.1
U3KQE9 SNORD36A-201ENST00000362874 73 ntBASIC1.91□□□□□ -2.1
U3KQE9 RNU6-478P-201ENST00000363904 110 ntBASIC1.91□□□□□ -2.1
U3KQE9 SNORA80A-201ENST00000363922 136 ntBASIC1.91□□□□□ -2.1
U3KQE9 RNU6-580P-201ENST00000365159 107 ntBASIC1.91□□□□□ -2.1
U3KQE9 DEFA7P-201ENST00000382676 285 ntBASIC1.91□□□□□ -2.1
U3KQE9 MIR144-201ENST00000384886 86 ntBASIC1.91□□□□□ -2.1
U3KQE9 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
U3KQE9 MIR548U-201ENST00000390728 81 ntBASIC1.91□□□□□ -2.1
U3KQE9 RNU6-466P-201ENST00000391224 103 ntBASIC1.91□□□□□ -2.1
U3KQE9 BX276092.1-201ENST00000427368 251 ntBASIC1.91□□□□□ -2.1
U3KQE9 MIR4536-1-201ENST00000583537 88 ntBASIC1.91□□□□□ -2.1
U3KQE9 RNU7-10P-201ENST00000607194 63 ntBASIC1.91□□□□□ -2.1
U3KQE9 MIR8074-201ENST00000615081 81 ntBASIC1.91□□□□□ -2.1
U3KQE9 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.91□□□□□ -2.1
U3KQE9 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
U3KQE9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
U3KQE9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
U3KQE9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.1
U3KQE9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.9□□□□□ -2.1
U3KQE9 MIRLET7A1-201ENST00000362295 80 ntBASIC1.9□□□□□ -2.11
U3KQE9 SNORA63.2-201ENST00000362603 126 ntBASIC1.9□□□□□ -2.11
U3KQE9 SNORD33-201ENST00000362761 85 ntBASIC1.9□□□□□ -2.11
U3KQE9 SNORA40.18-201ENST00000391200 128 ntBASIC1.9□□□□□ -2.11
U3KQE9 EIF4BP1-201ENST00000554881 351 ntBASIC1.9□□□□□ -2.11
U3KQE9 AL773524.1-201ENST00000614065 229 ntBASIC1.9□□□□□ -2.11
U3KQE9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
U3KQE9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
U3KQE9 AC062016.1-201ENST00000355719 319 ntBASIC1.89□□□□□ -2.11
U3KQE9 Y_RNA.264-201ENST00000364665 102 ntBASIC1.89□□□□□ -2.11
U3KQE9 SNORA6-201ENST00000384033 151 ntBASIC1.89□□□□□ -2.11
U3KQE9 MIR519A1-201ENST00000385257 85 ntBASIC1.89□□□□□ -2.11
U3KQE9 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
U3KQE9 COTL1P1-201ENST00000422309 375 ntBASIC1.89□□□□□ -2.11
U3KQE9 AC245517.4-201ENST00000448601 281 ntBASIC1.89□□□□□ -2.11
U3KQE9 AC023790.1-201ENST00000482174 347 ntBASIC1.89□□□□□ -2.11
U3KQE9 U4.3-201ENST00000621047 82 ntBASIC1.89□□□□□ -2.11
U3KQE9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
U3KQE9 MIR103A2-201ENST00000362154 78 ntBASIC1.88□□□□□ -2.11
U3KQE9 RNA5SP264-201ENST00000363115 107 ntBASIC1.88□□□□□ -2.11
U3KQE9 Y_RNA.283-201ENST00000364798 112 ntBASIC1.88□□□□□ -2.11
U3KQE9 RNA5SP126-201ENST00000365092 109 ntBASIC1.88□□□□□ -2.11
U3KQE9 SNORA67.4-201ENST00000384688 142 ntBASIC1.88□□□□□ -2.11
U3KQE9 Y_RNA.565-201ENST00000384719 101 ntBASIC1.88□□□□□ -2.11
U3KQE9 RNU6-205P-201ENST00000390858 107 ntBASIC1.88□□□□□ -2.11
U3KQE9 MIR889-201ENST00000401280 79 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms