Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 MIR4264-201ENST00000583520 66 ntBASIC2.49□□□□□ -2.01
PCDHB11Q9Y5F2 MIR8066-201ENST00000617280 78 ntBASIC2.49□□□□□ -2.01
PCDHB11Q9Y5F2 U4.3-201ENST00000621047 82 ntBASIC2.49□□□□□ -2.01
PCDHB11Q9Y5F2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC2.49□□□□□ -2.01
PCDHB11Q9Y5F2 AC080100.1-201ENST00000624239 5356 ntBASIC2.49□□□□□ -2.01
PCDHB11Q9Y5F2 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.49□□□□□ -2.01
PCDHB11Q9Y5F2 RNA5SP393-201ENST00000363423 117 ntBASIC2.48□□□□□ -2.01
PCDHB11Q9Y5F2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
PCDHB11Q9Y5F2 AC087499.7-201ENST00000441958 109 ntBASIC2.48□□□□□ -2.01
PCDHB11Q9Y5F2 HSPE1P24-201ENST00000450782 238 ntBASIC2.48□□□□□ -2.01
PCDHB11Q9Y5F2 RPS27P21-201ENST00000486977 252 ntBASIC2.48□□□□□ -2.01
PCDHB11Q9Y5F2 AC015688.6-201ENST00000577737 104 ntBASIC2.48□□□□□ -2.01
PCDHB11Q9Y5F2 MIR5092-201ENST00000583139 88 ntBASIC2.48□□□□□ -2.01
PCDHB11Q9Y5F2 MIR6740-201ENST00000618268 113 ntBASIC2.48□□□□□ -2.01
PCDHB11Q9Y5F2 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.48□□□□□ -2.01
PCDHB11Q9Y5F2 MIR4662A-201ENST00000637499 67 ntBASIC2.48□□□□□ -2.01
PCDHB11Q9Y5F2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
PCDHB11Q9Y5F2 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PCDHB11Q9Y5F2 ZNF658B-202ENST00000615961 3375 ntBASIC2.47□□□□□ -2.01
PCDHB11Q9Y5F2 SNORD115-37-201ENST00000363768 82 ntBASIC2.47□□□□□ -2.01
PCDHB11Q9Y5F2 MIR27B-201ENST00000385129 97 ntBASIC2.47□□□□□ -2.01
PCDHB11Q9Y5F2 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
PCDHB11Q9Y5F2 RNA5SP425-201ENST00000410336 112 ntBASIC2.47□□□□□ -2.01
PCDHB11Q9Y5F2 RNU6-237P-201ENST00000515985 71 ntBASIC2.47□□□□□ -2.01
PCDHB11Q9Y5F2 RNU1-41P-201ENST00000516161 162 ntBASIC2.47□□□□□ -2.01
PCDHB11Q9Y5F2 RNU1-48P-201ENST00000516400 162 ntBASIC2.47□□□□□ -2.01
PCDHB11Q9Y5F2 MIR4446-201ENST00000578505 67 ntBASIC2.47□□□□□ -2.01
PCDHB11Q9Y5F2 MIR5194-201ENST00000582634 120 ntBASIC2.47□□□□□ -2.01
PCDHB11Q9Y5F2 SNORA4-201ENST00000584302 138 ntBASIC2.47□□□□□ -2.01
PCDHB11Q9Y5F2 GHRLOS.1-201ENST00000610995 70 ntBASIC2.47□□□□□ -2.01
PCDHB11Q9Y5F2 FO624990.1-201ENST00000636373 85 ntBASIC2.47□□□□□ -2.01
PCDHB11Q9Y5F2 Y_RNA.94-201ENST00000363068 106 ntBASIC2.46□□□□□ -2.02
PCDHB11Q9Y5F2 MIR524-201ENST00000385242 87 ntBASIC2.46□□□□□ -2.02
PCDHB11Q9Y5F2 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
PCDHB11Q9Y5F2 RNU4-53P-201ENST00000410828 140 ntBASIC2.46□□□□□ -2.02
PCDHB11Q9Y5F2 SNORA77B-201ENST00000578179 125 ntBASIC2.46□□□□□ -2.02
PCDHB11Q9Y5F2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC2.46□□□□□ -2.02
PCDHB11Q9Y5F2 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.46□□□□□ -2.02
PCDHB11Q9Y5F2 U6.109-201ENST00000636749 87 ntBASIC2.46□□□□□ -2.02
PCDHB11Q9Y5F2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.45□□□□□ -2.02
PCDHB11Q9Y5F2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
PCDHB11Q9Y5F2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
PCDHB11Q9Y5F2 MIR30D-201ENST00000362283 70 ntBASIC2.45□□□□□ -2.02
PCDHB11Q9Y5F2 Y_RNA.57-201ENST00000362806 113 ntBASIC2.45□□□□□ -2.02
PCDHB11Q9Y5F2 SNORA25.3-201ENST00000363205 127 ntBASIC2.45□□□□□ -2.02
PCDHB11Q9Y5F2 SNORA67.4-201ENST00000384688 142 ntBASIC2.45□□□□□ -2.02
PCDHB11Q9Y5F2 MT-TN-201ENST00000387400 73 ntBASIC2.45□□□□□ -2.02
PCDHB11Q9Y5F2 RNU4-83P-201ENST00000410863 133 ntBASIC2.45□□□□□ -2.02
PCDHB11Q9Y5F2 AC140658.3-201ENST00000567603 271 ntBASIC2.45□□□□□ -2.02
PCDHB11Q9Y5F2 MIR4500-201ENST00000579472 76 ntBASIC2.45□□□□□ -2.02
PCDHB11Q9Y5F2 MIR4712-201ENST00000583750 82 ntBASIC2.45□□□□□ -2.02
PCDHB11Q9Y5F2 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
PCDHB11Q9Y5F2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.44□□□□□ -2.02
PCDHB11Q9Y5F2 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.44□□□□□ -2.02
PCDHB11Q9Y5F2 DEFA7P-201ENST00000382676 285 ntBASIC2.44□□□□□ -2.02
PCDHB11Q9Y5F2 RNU6-571P-201ENST00000384128 107 ntBASIC2.44□□□□□ -2.02
PCDHB11Q9Y5F2 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
PCDHB11Q9Y5F2 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.44□□□□□ -2.02
PCDHB11Q9Y5F2 RNU6-1165P-201ENST00000410119 107 ntBASIC2.44□□□□□ -2.02
PCDHB11Q9Y5F2 MIR2115-201ENST00000516657 100 ntBASIC2.44□□□□□ -2.02
PCDHB11Q9Y5F2 RNU6-850P-201ENST00000516934 103 ntBASIC2.44□□□□□ -2.02
PCDHB11Q9Y5F2 MIR4524B-201ENST00000581569 115 ntBASIC2.44□□□□□ -2.02
PCDHB11Q9Y5F2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHB11Q9Y5F2 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
PCDHB11Q9Y5F2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.43□□□□□ -2.02
PCDHB11Q9Y5F2 MIR6073-201ENST00000352083 89 ntBASIC2.43□□□□□ -2.02
PCDHB11Q9Y5F2 RNU6-776P-201ENST00000364403 104 ntBASIC2.43□□□□□ -2.02
PCDHB11Q9Y5F2 RNU6-1022P-201ENST00000365049 104 ntBASIC2.43□□□□□ -2.02
PCDHB11Q9Y5F2 SNORA3.2-201ENST00000408221 125 ntBASIC2.43□□□□□ -2.02
PCDHB11Q9Y5F2 AC244636.1-201ENST00000421152 228 ntBASIC2.43□□□□□ -2.02
PCDHB11Q9Y5F2 snoU13.25-201ENST00000458945 104 ntBASIC2.43□□□□□ -2.02
PCDHB11Q9Y5F2 RN7SL274P-201ENST00000492268 272 ntBASIC2.43□□□□□ -2.02
PCDHB11Q9Y5F2 AL512598.1-201ENST00000610158 273 ntBASIC2.43□□□□□ -2.02
PCDHB11Q9Y5F2 AL773524.1-201ENST00000614065 229 ntBASIC2.43□□□□□ -2.02
PCDHB11Q9Y5F2 AC008163.1-202ENST00000636004 2889 ntBASIC2.42□□□□□ -2.02
PCDHB11Q9Y5F2 Y_RNA.119-201ENST00000363301 96 ntBASIC2.42□□□□□ -2.02
PCDHB11Q9Y5F2 RNA5SP456-201ENST00000364002 114 ntBASIC2.42□□□□□ -2.02
PCDHB11Q9Y5F2 MIR1236-201ENST00000408340 102 ntBASIC2.42□□□□□ -2.02
PCDHB11Q9Y5F2 Z98742.3-201ENST00000418637 326 ntBASIC2.42□□□□□ -2.02
PCDHB11Q9Y5F2 SNORD4B-201ENST00000459083 72 ntBASIC2.42□□□□□ -2.02
PCDHB11Q9Y5F2 RNA5SP320-201ENST00000516263 124 ntBASIC2.42□□□□□ -2.02
PCDHB11Q9Y5F2 AC010297.1-201ENST00000623948 149 ntBASIC2.42□□□□□ -2.02
PCDHB11Q9Y5F2 SNORA67.1-201ENST00000364749 141 ntBASIC2.41□□□□□ -2.02
PCDHB11Q9Y5F2 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
PCDHB11Q9Y5F2 RNU6-205P-201ENST00000390858 107 ntBASIC2.41□□□□□ -2.02
PCDHB11Q9Y5F2 RNU7-62P-201ENST00000458856 62 ntBASIC2.41□□□□□ -2.02
PCDHB11Q9Y5F2 snoU13.15-201ENST00000459407 104 ntBASIC2.41□□□□□ -2.02
PCDHB11Q9Y5F2 AP003716.2-201ENST00000528260 108 ntBASIC2.41□□□□□ -2.02
PCDHB11Q9Y5F2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.41□□□□□ -2.02
PCDHB11Q9Y5F2 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
PCDHB11Q9Y5F2 SNORA16B-201ENST00000364674 135 ntBASIC2.4□□□□□ -2.03
PCDHB11Q9Y5F2 MT-TF-201ENST00000387314 71 ntBASIC2.4□□□□□ -2.03
PCDHB11Q9Y5F2 AL356320.1-201ENST00000429616 163 ntBASIC2.4□□□□□ -2.03
PCDHB11Q9Y5F2 Y_RNA.648-201ENST00000459455 110 ntBASIC2.4□□□□□ -2.03
PCDHB11Q9Y5F2 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.4□□□□□ -2.03
PCDHB11Q9Y5F2 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
PCDHB11Q9Y5F2 MIR377-201ENST00000362145 69 ntBASIC2.39□□□□□ -2.03
PCDHB11Q9Y5F2 RNA5SP181-201ENST00000410246 98 ntBASIC2.39□□□□□ -2.03
PCDHB11Q9Y5F2 BX276092.1-201ENST00000427368 251 ntBASIC2.39□□□□□ -2.03
PCDHB11Q9Y5F2 RPL30P7-201ENST00000479312 323 ntBASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 221 ms