Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RNA5SP153-201ENST00000516498 76 ntBASIC-0.68□□□□□ -2.52
RHBDD3Q9Y3P4 RNU7-35P-201ENST00000517174 62 ntBASIC-0.68□□□□□ -2.52
RHBDD3Q9Y3P4 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.68□□□□□ -2.52
RHBDD3Q9Y3P4 MIR3129-201ENST00000581095 76 ntBASIC-0.68□□□□□ -2.52
RHBDD3Q9Y3P4 DLEU2_5.2-201ENST00000610606 84 ntBASIC-0.68□□□□□ -2.52
RHBDD3Q9Y3P4 PART1_1.1-201ENST00000611761 217 ntBASIC-0.68□□□□□ -2.52
RHBDD3Q9Y3P4 Y_RNA.802-201ENST00000614892 130 ntBASIC-0.68□□□□□ -2.52
RHBDD3Q9Y3P4 Y_RNA.24-201ENST00000362508 103 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 Y_RNA.80-201ENST00000362996 102 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 Y_RNA.259-201ENST00000364619 101 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 Y_RNA.474-201ENST00000384341 102 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 Y_RNA.485-201ENST00000384395 102 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 RNU6-455P-201ENST00000384681 107 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 MIR181B2-201ENST00000385004 89 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 MIR599-201ENST00000385069 95 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 MT-TT-201ENST00000387460 66 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 RNU6-893P-201ENST00000458841 100 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 SNORA20.3-201ENST00000516880 132 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 RNA5SP66-201ENST00000517178 101 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 AP001328.1-201ENST00000528550 176 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 MIR548AE1-201ENST00000583292 70 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 AC006504.6-201ENST00000590142 199 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 AL606534.2-204ENST00000635008 178 ntBASIC-0.69□□□□□ -2.52
RHBDD3Q9Y3P4 RNU6-1272P-201ENST00000362776 107 ntBASIC-0.7□□□□□ -2.52
RHBDD3Q9Y3P4 RNU6-509P-201ENST00000363519 107 ntBASIC-0.7□□□□□ -2.52
RHBDD3Q9Y3P4 RNU1-141P-201ENST00000364623 158 ntBASIC-0.7□□□□□ -2.52
RHBDD3Q9Y3P4 RNU5E-4P-201ENST00000364931 120 ntBASIC-0.7□□□□□ -2.52
RHBDD3Q9Y3P4 SNORD81.2-201ENST00000365153 76 ntBASIC-0.7□□□□□ -2.52
RHBDD3Q9Y3P4 RNU6-449P-201ENST00000383914 107 ntBASIC-0.7□□□□□ -2.52
RHBDD3Q9Y3P4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC-0.7□□□□□ -2.52
RHBDD3Q9Y3P4 Y_RNA.622-201ENST00000411091 108 ntBASIC-0.7□□□□□ -2.52
RHBDD3Q9Y3P4 RNU6-1046P-201ENST00000516538 107 ntBASIC-0.7□□□□□ -2.52
RHBDD3Q9Y3P4 IGKV1-22-201ENST00000524313 326 ntBASIC-0.7□□□□□ -2.52
RHBDD3Q9Y3P4 MIR5197-201ENST00000583721 112 ntBASIC-0.7□□□□□ -2.52
RHBDD3Q9Y3P4 Y_RNA.323-201ENST00000365157 109 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 SNORA32-201ENST00000384072 121 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 Y_RNA.496-201ENST00000384444 101 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 Y_RNA.569-201ENST00000384749 103 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 NDUFAF4P4-201ENST00000454883 502 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 HSPE1P25-201ENST00000455484 251 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 HAR1A.1-201ENST00000459583 118 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 Y_RNA.661-201ENST00000516003 99 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 RNA5SP67-201ENST00000516422 131 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 SNORD67.1-201ENST00000516618 108 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 RNU7-137P-201ENST00000516788 62 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 Y_RNA.715-201ENST00000517082 110 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 MIR548AG2-201ENST00000581228 64 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 AC097639.2-201ENST00000603159 172 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 AC007485.1-201ENST00000616755 206 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 AC104985.2-201ENST00000620598 500 ntBASIC-0.71□□□□□ -2.52
RHBDD3Q9Y3P4 RNU4-90P-201ENST00000362773 141 ntBASIC-0.72□□□□□ -2.52
RHBDD3Q9Y3P4 Y_RNA.160-201ENST00000363677 92 ntBASIC-0.72□□□□□ -2.52
RHBDD3Q9Y3P4 MIR539-201ENST00000365690 78 ntBASIC-0.72□□□□□ -2.52
RHBDD3Q9Y3P4 RNU6-662P-201ENST00000384253 104 ntBASIC-0.72□□□□□ -2.52
RHBDD3Q9Y3P4 MIR9-2-201ENST00000384838 87 ntBASIC-0.72□□□□□ -2.52
RHBDD3Q9Y3P4 RNY4P36-201ENST00000391116 96 ntBASIC-0.72□□□□□ -2.52
RHBDD3Q9Y3P4 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.72□□□□□ -2.52
RHBDD3Q9Y3P4 AL445193.1-201ENST00000441183 141 ntBASIC-0.72□□□□□ -2.52
RHBDD3Q9Y3P4 snoU13.11-201ENST00000459219 104 ntBASIC-0.72□□□□□ -2.52
RHBDD3Q9Y3P4 RNA5SP476-201ENST00000516613 103 ntBASIC-0.72□□□□□ -2.52
RHBDD3Q9Y3P4 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.72□□□□□ -2.52
RHBDD3Q9Y3P4 MIR548H5-201ENST00000580314 60 ntBASIC-0.72□□□□□ -2.52
RHBDD3Q9Y3P4 AL008718.3-201ENST00000610217 321 ntBASIC-0.72□□□□□ -2.52
RHBDD3Q9Y3P4 uc_338.10-201ENST00000621872 182 ntBASIC-0.72□□□□□ -2.52
RHBDD3Q9Y3P4 SNORD113-8-201ENST00000363497 74 ntBASIC-0.73□□□□□ -2.53
RHBDD3Q9Y3P4 Y_RNA.387-201ENST00000383918 102 ntBASIC-0.73□□□□□ -2.53
RHBDD3Q9Y3P4 RNY3P5-201ENST00000384127 102 ntBASIC-0.73□□□□□ -2.53
RHBDD3Q9Y3P4 Y_RNA.542-201ENST00000384641 111 ntBASIC-0.73□□□□□ -2.53
RHBDD3Q9Y3P4 MIR635-201ENST00000384830 98 ntBASIC-0.73□□□□□ -2.53
RHBDD3Q9Y3P4 Y_RNA.618-201ENST00000410949 107 ntBASIC-0.73□□□□□ -2.53
RHBDD3Q9Y3P4 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.73□□□□□ -2.53
RHBDD3Q9Y3P4 YWHAEP2-201ENST00000580066 112 ntBASIC-0.73□□□□□ -2.53
RHBDD3Q9Y3P4 MIR4280-201ENST00000582178 76 ntBASIC-0.73□□□□□ -2.53
RHBDD3Q9Y3P4 AC006006.1-201ENST00000603082 144 ntBASIC-0.73□□□□□ -2.53
RHBDD3Q9Y3P4 AC092794.1-201ENST00000612734 582 ntBASIC-0.73□□□□□ -2.53
RHBDD3Q9Y3P4 U4.1-201ENST00000620349 87 ntBASIC-0.73□□□□□ -2.53
RHBDD3Q9Y3P4 snoU18.1-201ENST00000629629 71 ntBASIC-0.73□□□□□ -2.53
RHBDD3Q9Y3P4 SNORD114-14-201ENST00000362723 75 ntBASIC-0.74□□□□□ -2.53
RHBDD3Q9Y3P4 Y_RNA.318-201ENST00000365131 97 ntBASIC-0.74□□□□□ -2.53
RHBDD3Q9Y3P4 Y_RNA.515-201ENST00000384535 112 ntBASIC-0.74□□□□□ -2.53
RHBDD3Q9Y3P4 SNORD56B-201ENST00000384713 71 ntBASIC-0.74□□□□□ -2.53
RHBDD3Q9Y3P4 Y_RNA.602-201ENST00000410535 92 ntBASIC-0.74□□□□□ -2.53
RHBDD3Q9Y3P4 RNU6-453P-201ENST00000516819 85 ntBASIC-0.74□□□□□ -2.53
RHBDD3Q9Y3P4 RNU6-86P-201ENST00000606534 107 ntBASIC-0.74□□□□□ -2.53
RHBDD3Q9Y3P4 SNORD58B-201ENST00000607313 66 ntBASIC-0.74□□□□□ -2.53
RHBDD3Q9Y3P4 Y_RNA.252-201ENST00000364556 101 ntBASIC-0.75□□□□□ -2.53
RHBDD3Q9Y3P4 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.75□□□□□ -2.53
RHBDD3Q9Y3P4 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.75□□□□□ -2.53
RHBDD3Q9Y3P4 Y_RNA.432-201ENST00000384087 111 ntBASIC-0.75□□□□□ -2.53
RHBDD3Q9Y3P4 RNU6-429P-201ENST00000384582 108 ntBASIC-0.75□□□□□ -2.53
RHBDD3Q9Y3P4 SNORA53-201ENST00000391141 249 ntBASIC-0.75□□□□□ -2.53
RHBDD3Q9Y3P4 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC-0.75□□□□□ -2.53
RHBDD3Q9Y3P4 MTATP6P23-201ENST00000440153 476 ntBASIC-0.75□□□□□ -2.53
RHBDD3Q9Y3P4 AC093423.1-201ENST00000440817 142 ntBASIC-0.75□□□□□ -2.53
RHBDD3Q9Y3P4 RNU7-195P-201ENST00000458793 62 ntBASIC-0.75□□□□□ -2.53
RHBDD3Q9Y3P4 Y_RNA.639-201ENST00000458981 102 ntBASIC-0.75□□□□□ -2.53
RHBDD3Q9Y3P4 RNU6-561P-201ENST00000516222 102 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 176.4 ms