Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 RPL39P34-201ENST00000477141 156 ntBASIC1.56□□□□□ -2.16
USP25Q9UHP3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.56□□□□□ -2.16
USP25Q9UHP3 AC087741.2-201ENST00000619415 172 ntBASIC1.56□□□□□ -2.16
USP25Q9UHP3 AL589743.1-201ENST00000551932 2712 ntBASIC1.56□□□□□ -2.16
USP25Q9UHP3 MIR26B-201ENST00000362251 77 ntBASIC1.55□□□□□ -2.16
USP25Q9UHP3 RNA5SP327-201ENST00000362494 101 ntBASIC1.55□□□□□ -2.16
USP25Q9UHP3 Y_RNA.49-201ENST00000362714 112 ntBASIC1.55□□□□□ -2.16
USP25Q9UHP3 Y_RNA.323-201ENST00000365157 109 ntBASIC1.55□□□□□ -2.16
USP25Q9UHP3 AC090844.1-201ENST00000422019 156 ntBASIC1.55□□□□□ -2.16
USP25Q9UHP3 MIR548AE2-201ENST00000583456 67 ntBASIC1.55□□□□□ -2.16
USP25Q9UHP3 AL645939.4-201ENST00000604495 135 ntBASIC1.55□□□□□ -2.16
USP25Q9UHP3 RNU6-94P-201ENST00000607728 107 ntBASIC1.55□□□□□ -2.16
USP25Q9UHP3 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
USP25Q9UHP3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
USP25Q9UHP3 MIR499A-201ENST00000384903 122 ntBASIC1.54□□□□□ -2.16
USP25Q9UHP3 AL133373.1-201ENST00000497098 94 ntBASIC1.54□□□□□ -2.16
USP25Q9UHP3 SNORA31.2-201ENST00000516019 134 ntBASIC1.54□□□□□ -2.16
USP25Q9UHP3 RNA5SP33-201ENST00000516687 98 ntBASIC1.54□□□□□ -2.16
USP25Q9UHP3 RNU7-6P-201ENST00000516845 62 ntBASIC1.54□□□□□ -2.16
USP25Q9UHP3 MIR8070-201ENST00000616510 88 ntBASIC1.54□□□□□ -2.16
USP25Q9UHP3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.54□□□□□ -2.16
USP25Q9UHP3 SNORA25.9-201ENST00000365087 128 ntBASIC1.53□□□□□ -2.16
USP25Q9UHP3 SNORD38B-201ENST00000384690 67 ntBASIC1.53□□□□□ -2.16
USP25Q9UHP3 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.53□□□□□ -2.16
USP25Q9UHP3 AC245047.7-201ENST00000440265 293 ntBASIC1.53□□□□□ -2.16
USP25Q9UHP3 RNU7-95P-201ENST00000459222 64 ntBASIC1.53□□□□□ -2.16
USP25Q9UHP3 MIR1270-201ENST00000459320 83 ntBASIC1.53□□□□□ -2.16
USP25Q9UHP3 AC048334.1-201ENST00000477975 159 ntBASIC1.53□□□□□ -2.16
USP25Q9UHP3 RNU11-2P-201ENST00000516898 142 ntBASIC1.53□□□□□ -2.16
USP25Q9UHP3 AL391516.1-201ENST00000554380 2449 ntBASIC1.53□□□□□ -2.16
USP25Q9UHP3 AC019288.1-201ENST00000557918 224 ntBASIC1.53□□□□□ -2.16
USP25Q9UHP3 SNORD38B-202ENST00000625943 69 ntBASIC1.53□□□□□ -2.16
USP25Q9UHP3 AL162726.3-218ENST00000636401 95 ntBASIC1.53□□□□□ -2.16
USP25Q9UHP3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
USP25Q9UHP3 SNORA63.5-201ENST00000363548 123 ntBASIC1.52□□□□□ -2.17
USP25Q9UHP3 SNORA25.8-201ENST00000364831 128 ntBASIC1.52□□□□□ -2.17
USP25Q9UHP3 Y_RNA.309-201ENST00000365046 111 ntBASIC1.52□□□□□ -2.17
USP25Q9UHP3 RNU6-106P-201ENST00000384405 107 ntBASIC1.52□□□□□ -2.17
USP25Q9UHP3 SNORA70.22-201ENST00000517160 124 ntBASIC1.52□□□□□ -2.17
USP25Q9UHP3 RNU7-35P-201ENST00000517174 62 ntBASIC1.52□□□□□ -2.17
USP25Q9UHP3 PRELID3BP2-201ENST00000605362 201 ntBASIC1.52□□□□□ -2.17
USP25Q9UHP3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.51□□□□□ -2.17
USP25Q9UHP3 U8.6-201ENST00000364939 135 ntBASIC1.51□□□□□ -2.17
USP25Q9UHP3 MT-TN-201ENST00000387400 73 ntBASIC1.51□□□□□ -2.17
USP25Q9UHP3 SNORD77B-201ENST00000391112 67 ntBASIC1.51□□□□□ -2.17
USP25Q9UHP3 AC068339.1-201ENST00000526965 141 ntBASIC1.51□□□□□ -2.17
USP25Q9UHP3 RNU6-396P-201ENST00000365369 105 ntBASIC1.5□□□□□ -2.17
USP25Q9UHP3 RNU6-1014P-201ENST00000383940 103 ntBASIC1.5□□□□□ -2.17
USP25Q9UHP3 SNORA25-201ENST00000384384 134 ntBASIC1.5□□□□□ -2.17
USP25Q9UHP3 MIR1185-1-201ENST00000408598 86 ntBASIC1.5□□□□□ -2.17
USP25Q9UHP3 MIR1912-201ENST00000410389 80 ntBASIC1.5□□□□□ -2.17
USP25Q9UHP3 RNU6-554P-201ENST00000410466 106 ntBASIC1.5□□□□□ -2.17
USP25Q9UHP3 MIR5009-201ENST00000578736 100 ntBASIC1.5□□□□□ -2.17
USP25Q9UHP3 uc_338.28-201ENST00000612082 187 ntBASIC1.5□□□□□ -2.17
USP25Q9UHP3 ZNF209P-201ENST00000593450 2304 ntBASIC1.49□□□□□ -2.17
USP25Q9UHP3 RNA5SP264-201ENST00000363115 107 ntBASIC1.49□□□□□ -2.17
USP25Q9UHP3 SNORA25.3-201ENST00000363205 127 ntBASIC1.49□□□□□ -2.17
USP25Q9UHP3 Y_RNA.163-201ENST00000363702 113 ntBASIC1.49□□□□□ -2.17
USP25Q9UHP3 SNORA18-201ENST00000384416 132 ntBASIC1.49□□□□□ -2.17
USP25Q9UHP3 RNU6-342P-201ENST00000384521 104 ntBASIC1.49□□□□□ -2.17
USP25Q9UHP3 RNU6-1086P-201ENST00000410930 100 ntBASIC1.49□□□□□ -2.17
USP25Q9UHP3 AC244023.1-201ENST00000426884 112 ntBASIC1.49□□□□□ -2.17
USP25Q9UHP3 MIR2115-201ENST00000516657 100 ntBASIC1.49□□□□□ -2.17
USP25Q9UHP3 MIR4264-201ENST00000583520 66 ntBASIC1.49□□□□□ -2.17
USP25Q9UHP3 AC242498.1-201ENST00000604134 111 ntBASIC1.49□□□□□ -2.17
USP25Q9UHP3 Y_RNA.773-201ENST00000607168 90 ntBASIC1.49□□□□□ -2.17
USP25Q9UHP3 MIR7111-201ENST00000619751 72 ntBASIC1.49□□□□□ -2.17
USP25Q9UHP3 MIR377-201ENST00000362145 69 ntBASIC1.48□□□□□ -2.17
USP25Q9UHP3 RNU6-147P-201ENST00000383983 107 ntBASIC1.48□□□□□ -2.17
USP25Q9UHP3 RNU6-910P-201ENST00000390844 107 ntBASIC1.48□□□□□ -2.17
USP25Q9UHP3 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.48□□□□□ -2.17
USP25Q9UHP3 RNU6-363P-201ENST00000362895 105 ntBASIC1.47□□□□□ -2.17
USP25Q9UHP3 SNORA32-201ENST00000384072 121 ntBASIC1.47□□□□□ -2.17
USP25Q9UHP3 Y_RNA.508-201ENST00000384502 114 ntBASIC1.47□□□□□ -2.17
USP25Q9UHP3 MIR222-201ENST00000384992 110 ntBASIC1.47□□□□□ -2.17
USP25Q9UHP3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
USP25Q9UHP3 RNU6-816P-201ENST00000390914 107 ntBASIC1.47□□□□□ -2.17
USP25Q9UHP3 RNU6-1268P-201ENST00000391214 107 ntBASIC1.47□□□□□ -2.17
USP25Q9UHP3 RNU6-1239P-201ENST00000391310 107 ntBASIC1.47□□□□□ -2.17
USP25Q9UHP3 RNU6-613P-201ENST00000410412 108 ntBASIC1.47□□□□□ -2.17
USP25Q9UHP3 AL031737.1-201ENST00000450125 223 ntBASIC1.47□□□□□ -2.17
USP25Q9UHP3 RNU1-123P-201ENST00000458950 160 ntBASIC1.47□□□□□ -2.17
USP25Q9UHP3 MIR1255B1-201ENST00000636325 63 ntBASIC1.47□□□□□ -2.17
USP25Q9UHP3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
USP25Q9UHP3 MIR103A2-201ENST00000362154 78 ntBASIC1.46□□□□□ -2.18
USP25Q9UHP3 Y_RNA.327-201ENST00000365201 102 ntBASIC1.46□□□□□ -2.18
USP25Q9UHP3 RNU6-616P-201ENST00000384353 107 ntBASIC1.46□□□□□ -2.18
USP25Q9UHP3 Y_RNA.507-201ENST00000384500 99 ntBASIC1.46□□□□□ -2.18
USP25Q9UHP3 MIR563-201ENST00000385080 79 ntBASIC1.46□□□□□ -2.18
USP25Q9UHP3 MIR618-201ENST00000385287 98 ntBASIC1.46□□□□□ -2.18
USP25Q9UHP3 SNORD12-201ENST00000391002 90 ntBASIC1.46□□□□□ -2.18
USP25Q9UHP3 MIR1302-5-201ENST00000408164 150 ntBASIC1.46□□□□□ -2.18
USP25Q9UHP3 snoU13.2-201ENST00000459201 104 ntBASIC1.46□□□□□ -2.18
USP25Q9UHP3 MIR3613-201ENST00000579844 87 ntBASIC1.46□□□□□ -2.18
USP25Q9UHP3 FAM71BP1-201ENST00000604431 523 ntBASIC1.46□□□□□ -2.18
USP25Q9UHP3 MIR6516-201ENST00000630554 81 ntBASIC1.46□□□□□ -2.18
USP25Q9UHP3 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
USP25Q9UHP3 RNU6-766P-201ENST00000362478 107 ntBASIC1.45□□□□□ -2.18
USP25Q9UHP3 Y_RNA.78-201ENST00000362970 110 ntBASIC1.45□□□□□ -2.18
USP25Q9UHP3 RNU4-67P-201ENST00000364569 141 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 262.3 ms