Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 RNU4-58P-201ENST00000363192 141 ntBASIC2.7□□□□□ -1.98
PRDM9Q9NQV7 SNORD56.5-201ENST00000364281 72 ntBASIC2.7□□□□□ -1.98
PRDM9Q9NQV7 RNU6-471P-201ENST00000383944 106 ntBASIC2.7□□□□□ -1.98
PRDM9Q9NQV7 RNU6-1241P-201ENST00000384536 107 ntBASIC2.7□□□□□ -1.98
PRDM9Q9NQV7 MIR1302-7-201ENST00000408841 72 ntBASIC2.7□□□□□ -1.98
PRDM9Q9NQV7 RNA5SP270-201ENST00000411361 118 ntBASIC2.7□□□□□ -1.98
PRDM9Q9NQV7 RPS29P6-201ENST00000438196 145 ntBASIC2.7□□□□□ -1.98
PRDM9Q9NQV7 RNU6-1194P-201ENST00000516208 104 ntBASIC2.7□□□□□ -1.98
PRDM9Q9NQV7 SNORA9.3-201ENST00000516383 129 ntBASIC2.7□□□□□ -1.98
PRDM9Q9NQV7 MIR2115-201ENST00000516657 100 ntBASIC2.7□□□□□ -1.98
PRDM9Q9NQV7 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.7□□□□□ -1.98
PRDM9Q9NQV7 AL137790.1-201ENST00000634283 177 ntBASIC2.7□□□□□ -1.98
PRDM9Q9NQV7 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PRDM9Q9NQV7 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PRDM9Q9NQV7 MIR377-201ENST00000362145 69 ntBASIC2.69□□□□□ -1.98
PRDM9Q9NQV7 MIRLET7F1-201ENST00000362202 87 ntBASIC2.69□□□□□ -1.98
PRDM9Q9NQV7 Y_RNA.36-201ENST00000362602 112 ntBASIC2.69□□□□□ -1.98
PRDM9Q9NQV7 VTRNA1-1-201ENST00000363120 99 ntBASIC2.69□□□□□ -1.98
PRDM9Q9NQV7 SNORD41-201ENST00000386967 70 ntBASIC2.69□□□□□ -1.98
PRDM9Q9NQV7 MIR942-201ENST00000401111 86 ntBASIC2.69□□□□□ -1.98
PRDM9Q9NQV7 COTL1P1-201ENST00000422309 375 ntBASIC2.69□□□□□ -1.98
PRDM9Q9NQV7 RNU7-62P-201ENST00000458856 62 ntBASIC2.69□□□□□ -1.98
PRDM9Q9NQV7 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.69□□□□□ -1.98
PRDM9Q9NQV7 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
PRDM9Q9NQV7 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PRDM9Q9NQV7 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PRDM9Q9NQV7 SNORA67.4-201ENST00000384688 142 ntBASIC2.68□□□□□ -1.98
PRDM9Q9NQV7 MIR154-201ENST00000385243 84 ntBASIC2.68□□□□□ -1.98
PRDM9Q9NQV7 MIR519A1-201ENST00000385257 85 ntBASIC2.68□□□□□ -1.98
PRDM9Q9NQV7 SNORD63B-201ENST00000411005 70 ntBASIC2.68□□□□□ -1.98
PRDM9Q9NQV7 RNA5SP450-201ENST00000411206 102 ntBASIC2.68□□□□□ -1.98
PRDM9Q9NQV7 AL161935.2-201ENST00000414627 60 ntBASIC2.68□□□□□ -1.98
PRDM9Q9NQV7 AC006386.2-201ENST00000624491 75 ntBASIC2.68□□□□□ -1.98
PRDM9Q9NQV7 AC012005.1-201ENST00000624575 75 ntBASIC2.68□□□□□ -1.98
PRDM9Q9NQV7 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PRDM9Q9NQV7 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
PRDM9Q9NQV7 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
PRDM9Q9NQV7 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.67□□□□□ -1.98
PRDM9Q9NQV7 SNORD88.1-201ENST00000408684 91 ntBASIC2.67□□□□□ -1.98
PRDM9Q9NQV7 EIF4BP1-201ENST00000554881 351 ntBASIC2.67□□□□□ -1.98
PRDM9Q9NQV7 MIR4513-201ENST00000581077 86 ntBASIC2.67□□□□□ -1.98
PRDM9Q9NQV7 MIR3192-201ENST00000584920 77 ntBASIC2.67□□□□□ -1.98
PRDM9Q9NQV7 MIR664A-201ENST00000626086 82 ntBASIC2.67□□□□□ -1.98
PRDM9Q9NQV7 RNU6-957P-201ENST00000363652 99 ntBASIC2.66□□□□□ -1.98
PRDM9Q9NQV7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.66□□□□□ -1.98
PRDM9Q9NQV7 RNU7-106P-201ENST00000459514 67 ntBASIC2.66□□□□□ -1.98
PRDM9Q9NQV7 RPL30P7-201ENST00000479312 323 ntBASIC2.66□□□□□ -1.98
PRDM9Q9NQV7 MIR4298-201ENST00000584380 73 ntBASIC2.66□□□□□ -1.98
PRDM9Q9NQV7 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.66□□□□□ -1.98
PRDM9Q9NQV7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
PRDM9Q9NQV7 RNU4-82P-201ENST00000362443 140 ntBASIC2.65□□□□□ -1.99
PRDM9Q9NQV7 Y_RNA.42-201ENST00000362660 108 ntBASIC2.65□□□□□ -1.99
PRDM9Q9NQV7 RNY4P3-201ENST00000365254 95 ntBASIC2.65□□□□□ -1.99
PRDM9Q9NQV7 SNORA8.1-201ENST00000384250 140 ntBASIC2.65□□□□□ -1.99
PRDM9Q9NQV7 MIR513A1-201ENST00000385138 129 ntBASIC2.65□□□□□ -1.99
PRDM9Q9NQV7 RNU6-663P-201ENST00000391105 106 ntBASIC2.65□□□□□ -1.99
PRDM9Q9NQV7 AC087499.2-201ENST00000432861 149 ntBASIC2.65□□□□□ -1.99
PRDM9Q9NQV7 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.65□□□□□ -1.99
PRDM9Q9NQV7 MIR4658-201ENST00000584344 65 ntBASIC2.65□□□□□ -1.99
PRDM9Q9NQV7 RNU7-10P-201ENST00000607194 63 ntBASIC2.65□□□□□ -1.99
PRDM9Q9NQV7 MIR7106-201ENST00000612419 65 ntBASIC2.65□□□□□ -1.99
PRDM9Q9NQV7 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.65□□□□□ -1.99
PRDM9Q9NQV7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
PRDM9Q9NQV7 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
PRDM9Q9NQV7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.65□□□□□ -1.99
PRDM9Q9NQV7 SNORA80A-201ENST00000363922 136 ntBASIC2.64□□□□□ -1.99
PRDM9Q9NQV7 MIR9-1-201ENST00000385198 89 ntBASIC2.64□□□□□ -1.99
PRDM9Q9NQV7 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.64□□□□□ -1.99
PRDM9Q9NQV7 RNU6-531P-201ENST00000516694 104 ntBASIC2.64□□□□□ -1.99
PRDM9Q9NQV7 RNU6-250P-201ENST00000516958 103 ntBASIC2.64□□□□□ -1.99
PRDM9Q9NQV7 MIR4529-201ENST00000578110 78 ntBASIC2.64□□□□□ -1.99
PRDM9Q9NQV7 AC016717.2-201ENST00000609089 5141 ntBASIC2.64□□□□□ -1.99
PRDM9Q9NQV7 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.64□□□□□ -1.99
PRDM9Q9NQV7 RNA5SP259-201ENST00000365541 109 ntBASIC2.63□□□□□ -1.99
PRDM9Q9NQV7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
PRDM9Q9NQV7 RN7SL274P-201ENST00000492268 272 ntBASIC2.63□□□□□ -1.99
PRDM9Q9NQV7 RNU11-2P-201ENST00000516898 142 ntBASIC2.63□□□□□ -1.99
PRDM9Q9NQV7 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
PRDM9Q9NQV7 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
PRDM9Q9NQV7 RNU6-1051P-201ENST00000365471 102 ntBASIC2.62□□□□□ -1.99
PRDM9Q9NQV7 Y_RNA.500-201ENST00000384466 111 ntBASIC2.62□□□□□ -1.99
PRDM9Q9NQV7 SNORD90-201ENST00000391145 111 ntBASIC2.62□□□□□ -1.99
PRDM9Q9NQV7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.62□□□□□ -1.99
PRDM9Q9NQV7 RNA5SP21-201ENST00000410917 96 ntBASIC2.62□□□□□ -1.99
PRDM9Q9NQV7 MIR4491-201ENST00000581087 68 ntBASIC2.62□□□□□ -1.99
PRDM9Q9NQV7 AL161722.3-201ENST00000605789 2983 ntBASIC2.61□□□□□ -1.99
PRDM9Q9NQV7 SNORD115-31-201ENST00000365318 82 ntBASIC2.61□□□□□ -1.99
PRDM9Q9NQV7 RNU6-154P-201ENST00000384306 106 ntBASIC2.61□□□□□ -1.99
PRDM9Q9NQV7 Y_RNA.510-201ENST00000384511 114 ntBASIC2.61□□□□□ -1.99
PRDM9Q9NQV7 RNU6-205P-201ENST00000390858 107 ntBASIC2.61□□□□□ -1.99
PRDM9Q9NQV7 Y_RNA.588-201ENST00000391254 102 ntBASIC2.61□□□□□ -1.99
PRDM9Q9NQV7 RPS27P16-201ENST00000425758 201 ntBASIC2.61□□□□□ -1.99
PRDM9Q9NQV7 JTBP1-201ENST00000441314 247 ntBASIC2.61□□□□□ -1.99
PRDM9Q9NQV7 RNU6-922P-201ENST00000516753 99 ntBASIC2.61□□□□□ -1.99
PRDM9Q9NQV7 AL033523.1-201ENST00000605153 153 ntBASIC2.61□□□□□ -1.99
PRDM9Q9NQV7 FO624990.1-201ENST00000636373 85 ntBASIC2.61□□□□□ -1.99
PRDM9Q9NQV7 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
PRDM9Q9NQV7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.6□□□□□ -1.99
PRDM9Q9NQV7 RNU6-681P-201ENST00000364012 104 ntBASIC2.6□□□□□ -1.99
PRDM9Q9NQV7 Y_RNA.239-201ENST00000364444 113 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms