Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.86□□□□□ -2.27
SIX2Q9NPC8 IGKV1-22-201ENST00000524313 326 ntBASIC0.86□□□□□ -2.27
SIX2Q9NPC8 AC004812.1-201ENST00000540773 146 ntBASIC0.86□□□□□ -2.27
SIX2Q9NPC8 AL662814.1-201ENST00000617364 121 ntBASIC0.86□□□□□ -2.27
SIX2Q9NPC8 MIR30D-201ENST00000362283 70 ntBASIC0.85□□□□□ -2.27
SIX2Q9NPC8 RNU6-704P-201ENST00000364162 103 ntBASIC0.85□□□□□ -2.27
SIX2Q9NPC8 SNORA18-201ENST00000384416 132 ntBASIC0.85□□□□□ -2.27
SIX2Q9NPC8 RNU6-342P-201ENST00000384521 104 ntBASIC0.85□□□□□ -2.27
SIX2Q9NPC8 Y_RNA.531-201ENST00000384589 121 ntBASIC0.85□□□□□ -2.27
SIX2Q9NPC8 SNORD83.1-201ENST00000411362 77 ntBASIC0.85□□□□□ -2.27
SIX2Q9NPC8 AL158147.1-201ENST00000443970 75 ntBASIC0.85□□□□□ -2.27
SIX2Q9NPC8 RNY4P20-201ENST00000516678 93 ntBASIC0.85□□□□□ -2.27
SIX2Q9NPC8 SNORD114-24-201ENST00000365029 72 ntBASIC0.84□□□□□ -2.27
SIX2Q9NPC8 RNU6-934P-201ENST00000365154 107 ntBASIC0.84□□□□□ -2.27
SIX2Q9NPC8 RNU6-1237P-201ENST00000384777 107 ntBASIC0.84□□□□□ -2.27
SIX2Q9NPC8 MT-TF-201ENST00000387314 71 ntBASIC0.84□□□□□ -2.27
SIX2Q9NPC8 MIR942-201ENST00000401111 86 ntBASIC0.84□□□□□ -2.27
SIX2Q9NPC8 RNA5SP237-201ENST00000410414 113 ntBASIC0.84□□□□□ -2.27
SIX2Q9NPC8 Y_RNA.617-201ENST00000410920 90 ntBASIC0.84□□□□□ -2.27
SIX2Q9NPC8 FABP5P4-201ENST00000437203 171 ntBASIC0.84□□□□□ -2.27
SIX2Q9NPC8 MIR18B-201ENST00000454574 71 ntBASIC0.84□□□□□ -2.27
SIX2Q9NPC8 RN7SKP19-201ENST00000516016 252 ntBASIC0.84□□□□□ -2.27
SIX2Q9NPC8 RNA5SP33-201ENST00000516687 98 ntBASIC0.84□□□□□ -2.27
SIX2Q9NPC8 RNA5SP102-201ENST00000516865 106 ntBASIC0.84□□□□□ -2.27
SIX2Q9NPC8 RNU6-369P-201ENST00000362515 102 ntBASIC0.83□□□□□ -2.28
SIX2Q9NPC8 RNU1-93P-201ENST00000364704 169 ntBASIC0.83□□□□□ -2.28
SIX2Q9NPC8 AL603908.1-201ENST00000406098 201 ntBASIC0.83□□□□□ -2.28
SIX2Q9NPC8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.83□□□□□ -2.28
SIX2Q9NPC8 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.83□□□□□ -2.28
SIX2Q9NPC8 AC067940.1-201ENST00000458411 300 ntBASIC0.83□□□□□ -2.28
SIX2Q9NPC8 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.83□□□□□ -2.28
SIX2Q9NPC8 AC141846.1-201ENST00000568348 142 ntBASIC0.83□□□□□ -2.28
SIX2Q9NPC8 AL391516.1-201ENST00000554380 2449 ntBASIC0.83□□□□□ -2.28
SIX2Q9NPC8 RNU6-235P-201ENST00000362644 107 ntBASIC0.82□□□□□ -2.28
SIX2Q9NPC8 MIR539-201ENST00000365690 78 ntBASIC0.82□□□□□ -2.28
SIX2Q9NPC8 MIR1827-201ENST00000408549 66 ntBASIC0.82□□□□□ -2.28
SIX2Q9NPC8 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.82□□□□□ -2.28
SIX2Q9NPC8 RNU6-1086P-201ENST00000410930 100 ntBASIC0.82□□□□□ -2.28
SIX2Q9NPC8 RPS26P5-201ENST00000418544 335 ntBASIC0.82□□□□□ -2.28
SIX2Q9NPC8 AC015818.7-201ENST00000428754 109 ntBASIC0.82□□□□□ -2.28
SIX2Q9NPC8 AC087499.7-201ENST00000441958 109 ntBASIC0.82□□□□□ -2.28
SIX2Q9NPC8 RNU6-971P-201ENST00000516920 106 ntBASIC0.82□□□□□ -2.28
SIX2Q9NPC8 RNU7-35P-201ENST00000517174 62 ntBASIC0.82□□□□□ -2.28
SIX2Q9NPC8 AC022523.2-201ENST00000561045 150 ntBASIC0.82□□□□□ -2.28
SIX2Q9NPC8 MIR4771-2-201ENST00000577758 74 ntBASIC0.82□□□□□ -2.28
SIX2Q9NPC8 MIR4771-1-201ENST00000582617 74 ntBASIC0.82□□□□□ -2.28
SIX2Q9NPC8 MIR548AE2-201ENST00000583456 67 ntBASIC0.82□□□□□ -2.28
SIX2Q9NPC8 SNORA4-201ENST00000584302 138 ntBASIC0.82□□□□□ -2.28
SIX2Q9NPC8 MIR8070-201ENST00000616510 88 ntBASIC0.82□□□□□ -2.28
SIX2Q9NPC8 MIR1-1-201ENST00000362147 71 ntBASIC0.81□□□□□ -2.28
SIX2Q9NPC8 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.81□□□□□ -2.28
SIX2Q9NPC8 RNU6-1211P-201ENST00000459179 105 ntBASIC0.81□□□□□ -2.28
SIX2Q9NPC8 RNU6-781P-201ENST00000516377 101 ntBASIC0.81□□□□□ -2.28
SIX2Q9NPC8 RNU6-1110P-201ENST00000516462 101 ntBASIC0.81□□□□□ -2.28
SIX2Q9NPC8 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
SIX2Q9NPC8 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
SIX2Q9NPC8 Y_RNA.299-201ENST00000364973 94 ntBASIC0.8□□□□□ -2.28
SIX2Q9NPC8 RNY1P13-201ENST00000365030 105 ntBASIC0.8□□□□□ -2.28
SIX2Q9NPC8 RNU6-949P-201ENST00000384040 107 ntBASIC0.8□□□□□ -2.28
SIX2Q9NPC8 SNORA32-201ENST00000384072 121 ntBASIC0.8□□□□□ -2.28
SIX2Q9NPC8 RNU6-1104P-201ENST00000384723 104 ntBASIC0.8□□□□□ -2.28
SIX2Q9NPC8 MIR100-201ENST00000385259 80 ntBASIC0.8□□□□□ -2.28
SIX2Q9NPC8 SNORD89-201ENST00000390981 114 ntBASIC0.8□□□□□ -2.28
SIX2Q9NPC8 RNA5SP247-201ENST00000411181 105 ntBASIC0.8□□□□□ -2.28
SIX2Q9NPC8 U7.7-201ENST00000459276 60 ntBASIC0.8□□□□□ -2.28
SIX2Q9NPC8 PDCD5P2-201ENST00000507570 312 ntBASIC0.8□□□□□ -2.28
SIX2Q9NPC8 RNA5SP255-201ENST00000516370 107 ntBASIC0.8□□□□□ -2.28
SIX2Q9NPC8 AC020891.4-201ENST00000605745 93 ntBASIC0.8□□□□□ -2.28
SIX2Q9NPC8 AC023934.1-201ENST00000574529 2389 ntBASIC0.79□□□□□ -2.28
SIX2Q9NPC8 SNORA25.9-201ENST00000365087 128 ntBASIC0.79□□□□□ -2.28
SIX2Q9NPC8 SNORD58C-201ENST00000365223 64 ntBASIC0.79□□□□□ -2.28
SIX2Q9NPC8 MIRLET7F2-201ENST00000385277 83 ntBASIC0.79□□□□□ -2.28
SIX2Q9NPC8 RNU4-69P-201ENST00000410677 143 ntBASIC0.79□□□□□ -2.28
SIX2Q9NPC8 RNA5SP136-201ENST00000410906 107 ntBASIC0.79□□□□□ -2.28
SIX2Q9NPC8 RNU7-185P-201ENST00000459215 60 ntBASIC0.79□□□□□ -2.28
SIX2Q9NPC8 MIR1270-201ENST00000459320 83 ntBASIC0.79□□□□□ -2.28
SIX2Q9NPC8 RPL39P28-201ENST00000465655 155 ntBASIC0.79□□□□□ -2.28
SIX2Q9NPC8 RNU7-79P-201ENST00000516082 62 ntBASIC0.79□□□□□ -2.28
SIX2Q9NPC8 MIR4676-201ENST00000583078 72 ntBASIC0.79□□□□□ -2.28
SIX2Q9NPC8 5S_rRNA.15-201ENST00000611169 127 ntBASIC0.79□□□□□ -2.28
SIX2Q9NPC8 Y_RNA.218-201ENST00000364218 104 ntBASIC0.78□□□□□ -2.28
SIX2Q9NPC8 Y_RNA.226-201ENST00000364337 114 ntBASIC0.78□□□□□ -2.28
SIX2Q9NPC8 RNU6-1335P-201ENST00000365426 107 ntBASIC0.78□□□□□ -2.28
SIX2Q9NPC8 MIR499A-201ENST00000384903 122 ntBASIC0.78□□□□□ -2.28
SIX2Q9NPC8 U8.15-201ENST00000390947 134 ntBASIC0.78□□□□□ -2.28
SIX2Q9NPC8 MIR1263-201ENST00000408324 86 ntBASIC0.78□□□□□ -2.28
SIX2Q9NPC8 MIR1257-201ENST00000408490 117 ntBASIC0.78□□□□□ -2.28
SIX2Q9NPC8 TMSB4XP3-201ENST00000445144 114 ntBASIC0.78□□□□□ -2.28
SIX2Q9NPC8 RNU6-772P-201ENST00000516042 105 ntBASIC0.78□□□□□ -2.28
SIX2Q9NPC8 AC211469.2-201ENST00000605461 205 ntBASIC0.78□□□□□ -2.28
SIX2Q9NPC8 AL136317.1-201ENST00000612653 226 ntBASIC0.78□□□□□ -2.28
SIX2Q9NPC8 Y_RNA.198-201ENST00000364013 98 ntBASIC0.77□□□□□ -2.29
SIX2Q9NPC8 RNU1-36P-201ENST00000365130 165 ntBASIC0.77□□□□□ -2.29
SIX2Q9NPC8 RNU6-80P-201ENST00000384195 107 ntBASIC0.77□□□□□ -2.29
SIX2Q9NPC8 MIR125B2-201ENST00000385128 89 ntBASIC0.77□□□□□ -2.29
SIX2Q9NPC8 MIR146A-201ENST00000385201 99 ntBASIC0.77□□□□□ -2.29
SIX2Q9NPC8 MT-TI-201ENST00000387365 69 ntBASIC0.77□□□□□ -2.29
SIX2Q9NPC8 MIR1276-201ENST00000408707 83 ntBASIC0.77□□□□□ -2.29
SIX2Q9NPC8 AC096949.1-201ENST00000412047 152 ntBASIC0.77□□□□□ -2.29
SIX2Q9NPC8 AC004941.2-201ENST00000427009 228 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms