Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 RNU6-1082P-201ENST00000364574 107 ntBASIC0.6□□□□□ -2.31
Q9N2K0 RNA5SP222-201ENST00000411039 105 ntBASIC0.6□□□□□ -2.31
Q9N2K0 MTND5P15-201ENST00000434246 349 ntBASIC0.6□□□□□ -2.31
Q9N2K0 RNA5SP480-201ENST00000516840 109 ntBASIC0.6□□□□□ -2.31
Q9N2K0 RNU7-156P-201ENST00000517214 74 ntBASIC0.6□□□□□ -2.31
Q9N2K0 SNORA81.3-201ENST00000517283 198 ntBASIC0.6□□□□□ -2.31
Q9N2K0 AC090897.1-201ENST00000580909 226 ntBASIC0.6□□□□□ -2.31
Q9N2K0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.6□□□□□ -2.31
Q9N2K0 RNU4-16P-201ENST00000364737 141 ntBASIC0.59□□□□□ -2.31
Q9N2K0 RNU6-1336P-201ENST00000383886 109 ntBASIC0.59□□□□□ -2.31
Q9N2K0 Y_RNA.441-201ENST00000384123 112 ntBASIC0.59□□□□□ -2.31
Q9N2K0 RNU6-1237P-201ENST00000384777 107 ntBASIC0.59□□□□□ -2.31
Q9N2K0 MIR598-201ENST00000384868 97 ntBASIC0.59□□□□□ -2.31
Q9N2K0 SNORD93-201ENST00000408813 74 ntBASIC0.59□□□□□ -2.31
Q9N2K0 RNU6-733P-201ENST00000410759 104 ntBASIC0.59□□□□□ -2.31
Q9N2K0 RNA5SP144-201ENST00000410846 116 ntBASIC0.59□□□□□ -2.31
Q9N2K0 RNU6-1086P-201ENST00000410930 100 ntBASIC0.59□□□□□ -2.31
Q9N2K0 RNA5SP436-201ENST00000516020 115 ntBASIC0.59□□□□□ -2.31
Q9N2K0 AC141846.1-201ENST00000568348 142 ntBASIC0.59□□□□□ -2.31
Q9N2K0 Y_RNA.757-201ENST00000578934 114 ntBASIC0.59□□□□□ -2.31
Q9N2K0 SNORD18B-201ENST00000365659 72 ntBASIC0.58□□□□□ -2.32
Q9N2K0 Y_RNA.497-201ENST00000384447 98 ntBASIC0.58□□□□□ -2.32
Q9N2K0 MIR7-2-201ENST00000384970 110 ntBASIC0.58□□□□□ -2.32
Q9N2K0 SNORD37.2-201ENST00000391075 66 ntBASIC0.58□□□□□ -2.32
Q9N2K0 SNORD100-201ENST00000408573 76 ntBASIC0.58□□□□□ -2.32
Q9N2K0 RNU6ATAC42P-201ENST00000408637 95 ntBASIC0.58□□□□□ -2.32
Q9N2K0 AC004941.2-201ENST00000427009 228 ntBASIC0.58□□□□□ -2.32
Q9N2K0 RNU7-102P-201ENST00000458948 62 ntBASIC0.58□□□□□ -2.32
Q9N2K0 RNU6-861P-201ENST00000516745 106 ntBASIC0.58□□□□□ -2.32
Q9N2K0 AC018659.1-201ENST00000551083 169 ntBASIC0.58□□□□□ -2.32
Q9N2K0 CYP3A137P-201ENST00000562436 69 ntBASIC0.58□□□□□ -2.32
Q9N2K0 AL590095.2-201ENST00000604136 117 ntBASIC0.58□□□□□ -2.32
Q9N2K0 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0.58□□□□□ -2.32
Q9N2K0 PVT1_3.1-201ENST00000620853 95 ntBASIC0.58□□□□□ -2.32
Q9N2K0 RNU6-949P-201ENST00000384040 107 ntBASIC0.57□□□□□ -2.32
Q9N2K0 SNORA18-201ENST00000384416 132 ntBASIC0.57□□□□□ -2.32
Q9N2K0 RNU4-83P-201ENST00000410863 133 ntBASIC0.57□□□□□ -2.32
Q9N2K0 MIR5000-201ENST00000577717 103 ntBASIC0.57□□□□□ -2.32
Q9N2K0 MIR3612-201ENST00000579753 87 ntBASIC0.57□□□□□ -2.32
Q9N2K0 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.56□□□□□ -2.32
Q9N2K0 SNORD115-2-201ENST00000362842 82 ntBASIC0.56□□□□□ -2.32
Q9N2K0 RNU6-682P-201ENST00000363843 106 ntBASIC0.56□□□□□ -2.32
Q9N2K0 SNORD115-20-201ENST00000365099 82 ntBASIC0.56□□□□□ -2.32
Q9N2K0 RNU6-690P-201ENST00000365242 106 ntBASIC0.56□□□□□ -2.32
Q9N2K0 SNORA36.2-201ENST00000384004 127 ntBASIC0.56□□□□□ -2.32
Q9N2K0 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.56□□□□□ -2.32
Q9N2K0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.56□□□□□ -2.32
Q9N2K0 RNU6-588P-201ENST00000410281 105 ntBASIC0.56□□□□□ -2.32
Q9N2K0 RNU7-113P-201ENST00000459273 62 ntBASIC0.56□□□□□ -2.32
Q9N2K0 RNA5SP121-201ENST00000516537 101 ntBASIC0.56□□□□□ -2.32
Q9N2K0 AP003327.1-201ENST00000529684 127 ntBASIC0.56□□□□□ -2.32
Q9N2K0 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.56□□□□□ -2.32
Q9N2K0 AC004792.1-201ENST00000614523 137 ntBASIC0.56□□□□□ -2.32
Q9N2K0 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC0.56□□□□□ -2.32
Q9N2K0 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
Q9N2K0 MIR18A-201ENST00000362310 71 ntBASIC0.55□□□□□ -2.32
Q9N2K0 Y_RNA.540-201ENST00000384638 111 ntBASIC0.55□□□□□ -2.32
Q9N2K0 MIR140-201ENST00000385282 100 ntBASIC0.55□□□□□ -2.32
Q9N2K0 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
Q9N2K0 Y_RNA.584-201ENST00000391090 114 ntBASIC0.55□□□□□ -2.32
Q9N2K0 RNU6-182P-201ENST00000516970 105 ntBASIC0.55□□□□□ -2.32
Q9N2K0 RNU6-448P-201ENST00000517052 107 ntBASIC0.55□□□□□ -2.32
Q9N2K0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC0.55□□□□□ -2.32
Q9N2K0 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC0.55□□□□□ -2.32
Q9N2K0 MIR6835-201ENST00000621552 64 ntBASIC0.55□□□□□ -2.32
Q9N2K0 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
Q9N2K0 Y_RNA.120-201ENST00000363304 110 ntBASIC0.54□□□□□ -2.32
Q9N2K0 Y_RNA.272-201ENST00000364696 102 ntBASIC0.54□□□□□ -2.32
Q9N2K0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.54□□□□□ -2.32
Q9N2K0 MIR4714-201ENST00000580728 77 ntBASIC0.54□□□□□ -2.32
Q9N2K0 MIR4305-201ENST00000583252 102 ntBASIC0.54□□□□□ -2.32
Q9N2K0 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.54□□□□□ -2.32
Q9N2K0 RNA5SP117-201ENST00000365294 118 ntBASIC0.53□□□□□ -2.32
Q9N2K0 RNU6-342P-201ENST00000384521 104 ntBASIC0.53□□□□□ -2.32
Q9N2K0 U8.15-201ENST00000390947 134 ntBASIC0.53□□□□□ -2.32
Q9N2K0 AC002350.1-201ENST00000490759 375 ntBASIC0.53□□□□□ -2.32
Q9N2K0 RNU6-1258P-201ENST00000516911 111 ntBASIC0.53□□□□□ -2.32
Q9N2K0 RNU6-765P-201ENST00000516916 99 ntBASIC0.53□□□□□ -2.32
Q9N2K0 RNU7-35P-201ENST00000517174 62 ntBASIC0.53□□□□□ -2.32
Q9N2K0 AC008608.1-201ENST00000603910 127 ntBASIC0.53□□□□□ -2.32
Q9N2K0 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.53□□□□□ -2.32
Q9N2K0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
Q9N2K0 Y_RNA.36-201ENST00000362602 112 ntBASIC0.52□□□□□ -2.33
Q9N2K0 Y_RNA.42-201ENST00000362660 108 ntBASIC0.52□□□□□ -2.33
Q9N2K0 Y_RNA.171-201ENST00000363760 102 ntBASIC0.52□□□□□ -2.33
Q9N2K0 RNY1P13-201ENST00000365030 105 ntBASIC0.52□□□□□ -2.33
Q9N2K0 RNU4-54P-201ENST00000516428 129 ntBASIC0.52□□□□□ -2.33
Q9N2K0 IGHVII-40-1-201ENST00000517316 58 ntBASIC0.52□□□□□ -2.33
Q9N2K0 AC112693.2-201ENST00000556538 232 ntBASIC0.52□□□□□ -2.33
Q9N2K0 AC133485.4-201ENST00000561835 220 ntBASIC0.52□□□□□ -2.33
Q9N2K0 AC133485.1-201ENST00000567176 124 ntBASIC0.52□□□□□ -2.33
Q9N2K0 AC138907.6-201ENST00000568401 126 ntBASIC0.52□□□□□ -2.33
Q9N2K0 AC138907.4-201ENST00000570107 226 ntBASIC0.52□□□□□ -2.33
Q9N2K0 MIR8066-201ENST00000617280 78 ntBASIC0.52□□□□□ -2.33
Q9N2K0 MIR3658-201ENST00000636291 56 ntBASIC0.52□□□□□ -2.33
Q9N2K0 RNU6-403P-201ENST00000363163 104 ntBASIC0.51□□□□□ -2.33
Q9N2K0 SNORD114-26-201ENST00000363543 72 ntBASIC0.51□□□□□ -2.33
Q9N2K0 RNU6-945P-201ENST00000383947 107 ntBASIC0.51□□□□□ -2.33
Q9N2K0 MIR508-201ENST00000384857 115 ntBASIC0.51□□□□□ -2.33
Q9N2K0 AL603914.1-201ENST00000401964 204 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms