Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RNU6-62P-201ENST00000516526 102 ntBASIC1.27□□□□□ -2.21
USP29Q9HBJ7 MIR4264-201ENST00000583520 66 ntBASIC1.27□□□□□ -2.21
USP29Q9HBJ7 AC025166.1-201ENST00000612411 163 ntBASIC1.27□□□□□ -2.21
USP29Q9HBJ7 RNA5SP205-201ENST00000364653 136 ntBASIC1.26□□□□□ -2.21
USP29Q9HBJ7 Y_RNA.528-201ENST00000384575 108 ntBASIC1.26□□□□□ -2.21
USP29Q9HBJ7 SNORA22C-201ENST00000384614 134 ntBASIC1.26□□□□□ -2.21
USP29Q9HBJ7 MIR563-201ENST00000385080 79 ntBASIC1.26□□□□□ -2.21
USP29Q9HBJ7 RNA5SP95-201ENST00000410319 137 ntBASIC1.26□□□□□ -2.21
USP29Q9HBJ7 RNU7-113P-201ENST00000459273 62 ntBASIC1.26□□□□□ -2.21
USP29Q9HBJ7 COX6CP6-201ENST00000490840 228 ntBASIC1.26□□□□□ -2.21
USP29Q9HBJ7 MTND5P18-201ENST00000445624 1801 ntBASIC1.26□□□□□ -2.21
USP29Q9HBJ7 Y_RNA.198-201ENST00000364013 98 ntBASIC1.25□□□□□ -2.21
USP29Q9HBJ7 SNORD114-22-201ENST00000365423 72 ntBASIC1.25□□□□□ -2.21
USP29Q9HBJ7 SNORA80D-201ENST00000384488 135 ntBASIC1.25□□□□□ -2.21
USP29Q9HBJ7 RNU6-342P-201ENST00000384521 104 ntBASIC1.25□□□□□ -2.21
USP29Q9HBJ7 RNU6-205P-201ENST00000390858 107 ntBASIC1.25□□□□□ -2.21
USP29Q9HBJ7 MIR548I2-201ENST00000408348 149 ntBASIC1.25□□□□□ -2.21
USP29Q9HBJ7 snoU13.2-201ENST00000459201 104 ntBASIC1.25□□□□□ -2.21
USP29Q9HBJ7 MIR1270-201ENST00000459320 83 ntBASIC1.25□□□□□ -2.21
USP29Q9HBJ7 RPS23P4-201ENST00000487908 423 ntBASIC1.25□□□□□ -2.21
USP29Q9HBJ7 RMST_2.1-201ENST00000617263 136 ntBASIC1.25□□□□□ -2.21
USP29Q9HBJ7 MIR6740-201ENST00000618268 113 ntBASIC1.25□□□□□ -2.21
USP29Q9HBJ7 Y_RNA.353-201ENST00000365440 108 ntBASIC1.24□□□□□ -2.21
USP29Q9HBJ7 RNU6-1154P-201ENST00000391001 104 ntBASIC1.24□□□□□ -2.21
USP29Q9HBJ7 RNU2-51P-201ENST00000410708 197 ntBASIC1.24□□□□□ -2.21
USP29Q9HBJ7 AL591704.2-201ENST00000421658 181 ntBASIC1.24□□□□□ -2.21
USP29Q9HBJ7 SNORA70.22-201ENST00000517160 124 ntBASIC1.24□□□□□ -2.21
USP29Q9HBJ7 AC036111.3-201ENST00000526389 112 ntBASIC1.24□□□□□ -2.21
USP29Q9HBJ7 AP000753.3-201ENST00000604083 169 ntBASIC1.24□□□□□ -2.21
USP29Q9HBJ7 uc_338.6-201ENST00000613544 171 ntBASIC1.24□□□□□ -2.21
USP29Q9HBJ7 Y_RNA.168-201ENST00000363740 102 ntBASIC1.23□□□□□ -2.21
USP29Q9HBJ7 Y_RNA.346-201ENST00000365385 112 ntBASIC1.23□□□□□ -2.21
USP29Q9HBJ7 MIR618-201ENST00000385287 98 ntBASIC1.23□□□□□ -2.21
USP29Q9HBJ7 SNORD12-201ENST00000391002 90 ntBASIC1.23□□□□□ -2.21
USP29Q9HBJ7 RNU6-735P-201ENST00000410612 107 ntBASIC1.23□□□□□ -2.21
USP29Q9HBJ7 RNU6-313P-201ENST00000516317 112 ntBASIC1.23□□□□□ -2.21
USP29Q9HBJ7 RNA5SP33-201ENST00000516687 98 ntBASIC1.23□□□□□ -2.21
USP29Q9HBJ7 IGHVII-40-1-201ENST00000517316 58 ntBASIC1.23□□□□□ -2.21
USP29Q9HBJ7 MIR548AE2-201ENST00000583456 67 ntBASIC1.23□□□□□ -2.21
USP29Q9HBJ7 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.23□□□□□ -2.21
USP29Q9HBJ7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
USP29Q9HBJ7 Y_RNA.330-201ENST00000365230 109 ntBASIC1.22□□□□□ -2.21
USP29Q9HBJ7 SNORA25-201ENST00000384384 134 ntBASIC1.22□□□□□ -2.21
USP29Q9HBJ7 SNORA18-201ENST00000384416 132 ntBASIC1.22□□□□□ -2.21
USP29Q9HBJ7 MIR588-201ENST00000384900 83 ntBASIC1.22□□□□□ -2.21
USP29Q9HBJ7 RNA5SP480-201ENST00000516840 109 ntBASIC1.22□□□□□ -2.21
USP29Q9HBJ7 RNU7-35P-201ENST00000517174 62 ntBASIC1.22□□□□□ -2.21
USP29Q9HBJ7 AC027335.2-201ENST00000624030 375 ntBASIC1.22□□□□□ -2.21
USP29Q9HBJ7 SNORA25.8-201ENST00000364831 128 ntBASIC1.21□□□□□ -2.22
USP29Q9HBJ7 RNU4-69P-201ENST00000410677 143 ntBASIC1.21□□□□□ -2.22
USP29Q9HBJ7 AC002429.1-201ENST00000437672 148 ntBASIC1.21□□□□□ -2.22
USP29Q9HBJ7 RNU7-90P-201ENST00000459216 62 ntBASIC1.21□□□□□ -2.22
USP29Q9HBJ7 SNORD33.1-201ENST00000516213 88 ntBASIC1.21□□□□□ -2.22
USP29Q9HBJ7 AC019288.1-201ENST00000557918 224 ntBASIC1.21□□□□□ -2.22
USP29Q9HBJ7 AC106800.4-201ENST00000614905 153 ntBASIC1.21□□□□□ -2.22
USP29Q9HBJ7 U6.95-201ENST00000636931 70 ntBASIC1.21□□□□□ -2.22
USP29Q9HBJ7 AC008163.1-202ENST00000636004 2889 ntBASIC1.2□□□□□ -2.22
USP29Q9HBJ7 MIR30D-201ENST00000362283 70 ntBASIC1.2□□□□□ -2.22
USP29Q9HBJ7 SNORD113.3-201ENST00000364630 78 ntBASIC1.2□□□□□ -2.22
USP29Q9HBJ7 Y_RNA.299-201ENST00000364973 94 ntBASIC1.2□□□□□ -2.22
USP29Q9HBJ7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
USP29Q9HBJ7 RNU7-62P-201ENST00000458856 62 ntBASIC1.2□□□□□ -2.22
USP29Q9HBJ7 AL662814.1-201ENST00000617364 121 ntBASIC1.2□□□□□ -2.22
USP29Q9HBJ7 AC087741.2-201ENST00000619415 172 ntBASIC1.2□□□□□ -2.22
USP29Q9HBJ7 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
USP29Q9HBJ7 Y_RNA.213-201ENST00000364178 111 ntBASIC1.19□□□□□ -2.22
USP29Q9HBJ7 SNORA2B-201ENST00000384583 137 ntBASIC1.19□□□□□ -2.22
USP29Q9HBJ7 RNU6-939P-201ENST00000384634 107 ntBASIC1.19□□□□□ -2.22
USP29Q9HBJ7 RNU6-1237P-201ENST00000384777 107 ntBASIC1.19□□□□□ -2.22
USP29Q9HBJ7 RNU6-1165P-201ENST00000410119 107 ntBASIC1.19□□□□□ -2.22
USP29Q9HBJ7 RNU6-1086P-201ENST00000410930 100 ntBASIC1.19□□□□□ -2.22
USP29Q9HBJ7 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.19□□□□□ -2.22
USP29Q9HBJ7 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.19□□□□□ -2.22
USP29Q9HBJ7 AC141846.1-201ENST00000568348 142 ntBASIC1.19□□□□□ -2.22
USP29Q9HBJ7 MIR6515-201ENST00000619843 57 ntBASIC1.19□□□□□ -2.22
USP29Q9HBJ7 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
USP29Q9HBJ7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
USP29Q9HBJ7 Y_RNA.291-201ENST00000364886 113 ntBASIC1.18□□□□□ -2.22
USP29Q9HBJ7 SNORA32-201ENST00000384072 121 ntBASIC1.18□□□□□ -2.22
USP29Q9HBJ7 RNU6-1081P-201ENST00000384537 107 ntBASIC1.18□□□□□ -2.22
USP29Q9HBJ7 SNORD111-201ENST00000408139 94 ntBASIC1.18□□□□□ -2.22
USP29Q9HBJ7 MIR1285-1-201ENST00000408593 84 ntBASIC1.18□□□□□ -2.22
USP29Q9HBJ7 MRPL35P3-201ENST00000421557 364 ntBASIC1.18□□□□□ -2.22
USP29Q9HBJ7 snoU13.21-201ENST00000459368 105 ntBASIC1.18□□□□□ -2.22
USP29Q9HBJ7 AC023827.1-201ENST00000569247 97 ntBASIC1.18□□□□□ -2.22
USP29Q9HBJ7 AC012676.2-201ENST00000619258 186 ntBASIC1.18□□□□□ -2.22
USP29Q9HBJ7 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.17□□□□□ -2.22
USP29Q9HBJ7 RNU1-124P-201ENST00000363861 145 ntBASIC1.17□□□□□ -2.22
USP29Q9HBJ7 RNU1-93P-201ENST00000364704 169 ntBASIC1.17□□□□□ -2.22
USP29Q9HBJ7 RNY1P13-201ENST00000365030 105 ntBASIC1.17□□□□□ -2.22
USP29Q9HBJ7 MIR19B1-201ENST00000384829 87 ntBASIC1.17□□□□□ -2.22
USP29Q9HBJ7 AC063976.4-201ENST00000421971 163 ntBASIC1.17□□□□□ -2.22
USP29Q9HBJ7 RNU7-79P-201ENST00000516082 62 ntBASIC1.17□□□□□ -2.22
USP29Q9HBJ7 MIR3163-201ENST00000581592 73 ntBASIC1.17□□□□□ -2.22
USP29Q9HBJ7 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.16□□□□□ -2.22
USP29Q9HBJ7 Y_RNA.649-201ENST00000459077 103 ntBASIC1.16□□□□□ -2.22
USP29Q9HBJ7 RNU7-6P-201ENST00000516845 62 ntBASIC1.16□□□□□ -2.22
USP29Q9HBJ7 RNA5SP404-201ENST00000517118 132 ntBASIC1.16□□□□□ -2.22
USP29Q9HBJ7 MIR4295-201ENST00000585286 85 ntBASIC1.16□□□□□ -2.22
USP29Q9HBJ7 AL359881.1-201ENST00000602916 267 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 206 ms