Protein–RNA interactions for Protein: Q9H0D2

ZNF541, Zinc finger protein 541, humanhuman

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541Q9H0D2 Y_RNA.700-201ENST00000516806 100 ntBASIC0.77□□□□□ -2.29
ZNF541Q9H0D2 AC011195.1-201ENST00000578177 177 ntBASIC0.77□□□□□ -2.29
ZNF541Q9H0D2 AC013244.2-201ENST00000603396 103 ntBASIC0.77□□□□□ -2.29
ZNF541Q9H0D2 AL353765.1-201ENST00000605514 183 ntBASIC0.77□□□□□ -2.29
ZNF541Q9H0D2 MIR3658-201ENST00000636291 56 ntBASIC0.77□□□□□ -2.29
ZNF541Q9H0D2 Y_RNA.52-201ENST00000362760 96 ntBASIC0.76□□□□□ -2.29
ZNF541Q9H0D2 RNY1P11-201ENST00000363759 113 ntBASIC0.76□□□□□ -2.29
ZNF541Q9H0D2 RNU6-1237P-201ENST00000384777 107 ntBASIC0.76□□□□□ -2.29
ZNF541Q9H0D2 MIR605-201ENST00000385078 83 ntBASIC0.76□□□□□ -2.29
ZNF541Q9H0D2 SNORD12C-201ENST00000386307 89 ntBASIC0.76□□□□□ -2.29
ZNF541Q9H0D2 RNU6-239P-201ENST00000390990 99 ntBASIC0.76□□□□□ -2.29
ZNF541Q9H0D2 MIR1827-201ENST00000408549 66 ntBASIC0.76□□□□□ -2.29
ZNF541Q9H0D2 RNU7-121P-201ENST00000516604 62 ntBASIC0.76□□□□□ -2.29
ZNF541Q9H0D2 RNU6-229P-201ENST00000516614 102 ntBASIC0.76□□□□□ -2.29
ZNF541Q9H0D2 MIR4653-201ENST00000585107 83 ntBASIC0.76□□□□□ -2.29
ZNF541Q9H0D2 AC104465.1-201ENST00000611365 139 ntBASIC0.76□□□□□ -2.29
ZNF541Q9H0D2 AC010332.2-201ENST00000613083 1904 ntBASIC0.75□□□□□ -2.29
ZNF541Q9H0D2 Y_RNA.280-201ENST00000364765 112 ntBASIC0.75□□□□□ -2.29
ZNF541Q9H0D2 Y_RNA.294-201ENST00000364916 102 ntBASIC0.75□□□□□ -2.29
ZNF541Q9H0D2 Y_RNA.337-201ENST00000365312 102 ntBASIC0.75□□□□□ -2.29
ZNF541Q9H0D2 RNU6-1319P-201ENST00000390855 104 ntBASIC0.75□□□□□ -2.29
ZNF541Q9H0D2 RNU6-747P-201ENST00000390928 104 ntBASIC0.75□□□□□ -2.29
ZNF541Q9H0D2 RNU6-241P-201ENST00000391148 104 ntBASIC0.75□□□□□ -2.29
ZNF541Q9H0D2 RNU6-588P-201ENST00000410281 105 ntBASIC0.75□□□□□ -2.29
ZNF541Q9H0D2 RNA5SP237-201ENST00000410414 113 ntBASIC0.75□□□□□ -2.29
ZNF541Q9H0D2 RNU6-177P-201ENST00000411257 104 ntBASIC0.75□□□□□ -2.29
ZNF541Q9H0D2 AC015818.7-201ENST00000428754 109 ntBASIC0.75□□□□□ -2.29
ZNF541Q9H0D2 AC087499.7-201ENST00000441958 109 ntBASIC0.75□□□□□ -2.29
ZNF541Q9H0D2 RNA5SP236-201ENST00000516169 116 ntBASIC0.75□□□□□ -2.29
ZNF541Q9H0D2 AC090425.1-201ENST00000610007 140 ntBASIC0.75□□□□□ -2.29
ZNF541Q9H0D2 MIR6086-201ENST00000638065 55 ntBASIC0.75□□□□□ -2.29
ZNF541Q9H0D2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
ZNF541Q9H0D2 RNU6-1318P-201ENST00000365389 103 ntBASIC0.74□□□□□ -2.29
ZNF541Q9H0D2 Y_RNA.357-201ENST00000365487 109 ntBASIC0.74□□□□□ -2.29
ZNF541Q9H0D2 Y_RNA.441-201ENST00000384123 112 ntBASIC0.74□□□□□ -2.29
ZNF541Q9H0D2 MIR146A-201ENST00000385201 99 ntBASIC0.74□□□□□ -2.29
ZNF541Q9H0D2 RNA5SP222-201ENST00000411039 105 ntBASIC0.74□□□□□ -2.29
ZNF541Q9H0D2 snoU13.2-201ENST00000459201 104 ntBASIC0.74□□□□□ -2.29
ZNF541Q9H0D2 Y_RNA.662-201ENST00000516028 97 ntBASIC0.74□□□□□ -2.29
ZNF541Q9H0D2 RNU6-364P-201ENST00000384387 107 ntBASIC0.73□□□□□ -2.29
ZNF541Q9H0D2 MIR563-201ENST00000385080 79 ntBASIC0.73□□□□□ -2.29
ZNF541Q9H0D2 RNU6-1165P-201ENST00000410119 107 ntBASIC0.73□□□□□ -2.29
ZNF541Q9H0D2 RNU6-1135P-201ENST00000411083 103 ntBASIC0.73□□□□□ -2.29
ZNF541Q9H0D2 MIR18B-201ENST00000454574 71 ntBASIC0.73□□□□□ -2.29
ZNF541Q9H0D2 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.73□□□□□ -2.29
ZNF541Q9H0D2 RNU2-60P-201ENST00000517290 128 ntBASIC0.73□□□□□ -2.29
ZNF541Q9H0D2 AC021613.1-201ENST00000623880 111 ntBASIC0.73□□□□□ -2.29
ZNF541Q9H0D2 MIR6844-201ENST00000637122 62 ntBASIC0.73□□□□□ -2.29
ZNF541Q9H0D2 MIR6841-201ENST00000637129 72 ntBASIC0.73□□□□□ -2.29
ZNF541Q9H0D2 RNU4-16P-201ENST00000364737 141 ntBASIC0.72□□□□□ -2.29
ZNF541Q9H0D2 RNU6-818P-201ENST00000364837 108 ntBASIC0.72□□□□□ -2.29
ZNF541Q9H0D2 Y_RNA.430-201ENST00000384081 110 ntBASIC0.72□□□□□ -2.29
ZNF541Q9H0D2 Y_RNA.497-201ENST00000384447 98 ntBASIC0.72□□□□□ -2.29
ZNF541Q9H0D2 MIR520H-201ENST00000385126 88 ntBASIC0.72□□□□□ -2.29
ZNF541Q9H0D2 RNU1-119P-201ENST00000391122 165 ntBASIC0.72□□□□□ -2.29
ZNF541Q9H0D2 SNORA75.5-201ENST00000391291 81 ntBASIC0.72□□□□□ -2.29
ZNF541Q9H0D2 MIR3646-201ENST00000578301 84 ntBASIC0.72□□□□□ -2.29
ZNF541Q9H0D2 HSBP1P2-201ENST00000299671 229 ntBASIC0.71□□□□□ -2.3
ZNF541Q9H0D2 RNU6-349P-201ENST00000362402 107 ntBASIC0.71□□□□□ -2.3
ZNF541Q9H0D2 Y_RNA.272-201ENST00000364696 102 ntBASIC0.71□□□□□ -2.3
ZNF541Q9H0D2 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.71□□□□□ -2.3
ZNF541Q9H0D2 SNORA36.2-201ENST00000384004 127 ntBASIC0.71□□□□□ -2.3
ZNF541Q9H0D2 RNU6-110P-201ENST00000384508 104 ntBASIC0.71□□□□□ -2.3
ZNF541Q9H0D2 MIR4676-201ENST00000583078 72 ntBASIC0.71□□□□□ -2.3
ZNF541Q9H0D2 DNAJC19P2-201ENST00000593340 302 ntBASIC0.71□□□□□ -2.3
ZNF541Q9H0D2 AC020891.4-201ENST00000605745 93 ntBASIC0.71□□□□□ -2.3
ZNF541Q9H0D2 MIR30D-201ENST00000362283 70 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 PCNPP3-201ENST00000393579 471 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 MIR938-201ENST00000401216 83 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 MIR1257-201ENST00000408490 117 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 RNU6-447P-201ENST00000410293 104 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 RNU6-1118P-201ENST00000410382 104 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 RNU6-1076P-201ENST00000410397 104 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 RNU6-355P-201ENST00000410427 104 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 RNU6-791P-201ENST00000410467 104 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 RNU6-705P-201ENST00000410601 104 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 RNU6-1100P-201ENST00000410691 104 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 RNU6-860P-201ENST00000410860 104 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 RNU6-1217P-201ENST00000411276 104 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 RNU6-785P-201ENST00000411324 104 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 AL606490.4-201ENST00000423117 127 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 RNU6-893P-201ENST00000458841 100 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 RNU6-1258P-201ENST00000516911 111 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 U6.90-201ENST00000614007 104 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 U6.70-201ENST00000620287 104 ntBASIC0.7□□□□□ -2.3
ZNF541Q9H0D2 SNORA22.1-201ENST00000362701 134 ntBASIC0.69□□□□□ -2.3
ZNF541Q9H0D2 RNU6-508P-201ENST00000363231 103 ntBASIC0.69□□□□□ -2.3
ZNF541Q9H0D2 RNY1P6-201ENST00000384193 109 ntBASIC0.69□□□□□ -2.3
ZNF541Q9H0D2 RNU6-794P-201ENST00000517261 64 ntBASIC0.69□□□□□ -2.3
ZNF541Q9H0D2 MIR5087-201ENST00000635826 76 ntBASIC0.69□□□□□ -2.3
ZNF541Q9H0D2 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
ZNF541Q9H0D2 Y_RNA.150-201ENST00000363562 102 ntBASIC0.68□□□□□ -2.3
ZNF541Q9H0D2 RNU6-1130P-201ENST00000365434 107 ntBASIC0.68□□□□□ -2.3
ZNF541Q9H0D2 SNORD93-201ENST00000408813 74 ntBASIC0.68□□□□□ -2.3
ZNF541Q9H0D2 RNU6-394P-201ENST00000410735 107 ntBASIC0.68□□□□□ -2.3
ZNF541Q9H0D2 RNU6-182P-201ENST00000516970 105 ntBASIC0.68□□□□□ -2.3
ZNF541Q9H0D2 MIR4804-201ENST00000581683 73 ntBASIC0.68□□□□□ -2.3
ZNF541Q9H0D2 FTX_2.1-201ENST00000618816 94 ntBASIC0.68□□□□□ -2.3
ZNF541Q9H0D2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.68□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms