Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
USB1Q9BQ65 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
USB1Q9BQ65 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
USB1Q9BQ65 RNU6-208P-201ENST00000362431 107 ntBASIC2.64□□□□□ -1.99
USB1Q9BQ65 SNORA9.2-201ENST00000365361 133 ntBASIC2.64□□□□□ -1.99
USB1Q9BQ65 COTL1P1-201ENST00000422309 375 ntBASIC2.64□□□□□ -1.99
USB1Q9BQ65 RNU6-531P-201ENST00000516694 104 ntBASIC2.64□□□□□ -1.99
USB1Q9BQ65 AL049779.4-201ENST00000604500 156 ntBASIC2.64□□□□□ -1.99
USB1Q9BQ65 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.64□□□□□ -1.99
USB1Q9BQ65 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.64□□□□□ -1.99
USB1Q9BQ65 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
USB1Q9BQ65 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
USB1Q9BQ65 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.63□□□□□ -1.99
USB1Q9BQ65 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
USB1Q9BQ65 MIRLET7F1-201ENST00000362202 87 ntBASIC2.63□□□□□ -1.99
USB1Q9BQ65 RNU4-58P-201ENST00000363192 141 ntBASIC2.63□□□□□ -1.99
USB1Q9BQ65 RNU6-53P-201ENST00000365367 106 ntBASIC2.63□□□□□ -1.99
USB1Q9BQ65 MIR520H-201ENST00000385126 88 ntBASIC2.63□□□□□ -1.99
USB1Q9BQ65 AC125388.1-201ENST00000459631 156 ntBASIC2.63□□□□□ -1.99
USB1Q9BQ65 RPL30P7-201ENST00000479312 323 ntBASIC2.63□□□□□ -1.99
USB1Q9BQ65 AP004217.1-201ENST00000480579 346 ntBASIC2.63□□□□□ -1.99
USB1Q9BQ65 RN7SL274P-201ENST00000492268 272 ntBASIC2.63□□□□□ -1.99
USB1Q9BQ65 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
USB1Q9BQ65 SNORA44-201ENST00000384584 132 ntBASIC2.62□□□□□ -1.99
USB1Q9BQ65 SNORD63B-201ENST00000411005 70 ntBASIC2.62□□□□□ -1.99
USB1Q9BQ65 MIR4491-201ENST00000581087 68 ntBASIC2.62□□□□□ -1.99
USB1Q9BQ65 uc_338.6-201ENST00000613544 171 ntBASIC2.62□□□□□ -1.99
USB1Q9BQ65 RNU6-957P-201ENST00000363652 99 ntBASIC2.61□□□□□ -1.99
USB1Q9BQ65 SNORA54-201ENST00000384281 123 ntBASIC2.61□□□□□ -1.99
USB1Q9BQ65 SNORD67-201ENST00000390833 111 ntBASIC2.61□□□□□ -1.99
USB1Q9BQ65 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
USB1Q9BQ65 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.61□□□□□ -1.99
USB1Q9BQ65 RNU6-687P-201ENST00000516443 89 ntBASIC2.61□□□□□ -1.99
USB1Q9BQ65 SNORA25.16-201ENST00000516741 121 ntBASIC2.61□□□□□ -1.99
USB1Q9BQ65 RNU6-303P-201ENST00000517091 106 ntBASIC2.61□□□□□ -1.99
USB1Q9BQ65 MIR3670-2-201ENST00000582974 65 ntBASIC2.61□□□□□ -1.99
USB1Q9BQ65 MIR3670-1-201ENST00000584160 65 ntBASIC2.61□□□□□ -1.99
USB1Q9BQ65 MIR3670-3-201ENST00000584855 65 ntBASIC2.61□□□□□ -1.99
USB1Q9BQ65 GHRLOS.1-201ENST00000610995 70 ntBASIC2.61□□□□□ -1.99
USB1Q9BQ65 MIR3670-4-201ENST00000612260 65 ntBASIC2.61□□□□□ -1.99
USB1Q9BQ65 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
USB1Q9BQ65 RNU1-52P-201ENST00000384190 164 ntBASIC2.6□□□□□ -1.99
USB1Q9BQ65 MIR518E-201ENST00000385252 88 ntBASIC2.6□□□□□ -1.99
USB1Q9BQ65 EEF1A1P41-201ENST00000414667 207 ntBASIC2.6□□□□□ -1.99
USB1Q9BQ65 RNU6-947P-201ENST00000516264 106 ntBASIC2.6□□□□□ -1.99
USB1Q9BQ65 SCARNA13-201ENST00000516672 275 ntBASIC2.6□□□□□ -1.99
USB1Q9BQ65 MIR7106-201ENST00000612419 65 ntBASIC2.6□□□□□ -1.99
USB1Q9BQ65 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
USB1Q9BQ65 RNA5SP393-201ENST00000363423 117 ntBASIC2.59□□□□□ -1.99
USB1Q9BQ65 Y_RNA.340-201ENST00000365330 92 ntBASIC2.59□□□□□ -1.99
USB1Q9BQ65 SNORD93-201ENST00000408813 74 ntBASIC2.59□□□□□ -1.99
USB1Q9BQ65 RNU6-634P-201ENST00000459134 106 ntBASIC2.59□□□□□ -1.99
USB1Q9BQ65 MIR6516-201ENST00000630554 81 ntBASIC2.59□□□□□ -1.99
USB1Q9BQ65 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
USB1Q9BQ65 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.58□□□□□ -2
USB1Q9BQ65 RNU6-439P-201ENST00000384188 106 ntBASIC2.58□□□□□ -2
USB1Q9BQ65 snoU13.25-201ENST00000458945 104 ntBASIC2.58□□□□□ -2
USB1Q9BQ65 RN7SL633P-201ENST00000488974 297 ntBASIC2.58□□□□□ -2
USB1Q9BQ65 RNU6-1194P-201ENST00000516208 104 ntBASIC2.58□□□□□ -2
USB1Q9BQ65 RNU2-19P-201ENST00000517288 84 ntBASIC2.58□□□□□ -2
USB1Q9BQ65 EIF4BP1-201ENST00000554881 351 ntBASIC2.58□□□□□ -2
USB1Q9BQ65 Z82195.2-201ENST00000612348 18351 ntBASIC2.57□□□□□ -2
USB1Q9BQ65 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
USB1Q9BQ65 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
USB1Q9BQ65 RNU5F-1-201ENST00000362507 117 ntBASIC2.57□□□□□ -2
USB1Q9BQ65 SNORA67.4-201ENST00000384688 142 ntBASIC2.57□□□□□ -2
USB1Q9BQ65 SNORD90-201ENST00000391145 111 ntBASIC2.57□□□□□ -2
USB1Q9BQ65 Y_RNA.588-201ENST00000391254 102 ntBASIC2.57□□□□□ -2
USB1Q9BQ65 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.57□□□□□ -2
USB1Q9BQ65 AC074348.1-201ENST00000426503 132 ntBASIC2.57□□□□□ -2
USB1Q9BQ65 RNU6-250P-201ENST00000516958 103 ntBASIC2.57□□□□□ -2
USB1Q9BQ65 U4.3-201ENST00000621047 82 ntBASIC2.57□□□□□ -2
USB1Q9BQ65 MIR664A-201ENST00000626086 82 ntBASIC2.57□□□□□ -2
USB1Q9BQ65 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
USB1Q9BQ65 MIR377-201ENST00000362145 69 ntBASIC2.56□□□□□ -2
USB1Q9BQ65 Y_RNA.12-201ENST00000362393 112 ntBASIC2.56□□□□□ -2
USB1Q9BQ65 SNORA6-201ENST00000384033 151 ntBASIC2.56□□□□□ -2
USB1Q9BQ65 RNA5SP212-201ENST00000391223 107 ntBASIC2.56□□□□□ -2
USB1Q9BQ65 AL133373.1-201ENST00000497098 94 ntBASIC2.56□□□□□ -2
USB1Q9BQ65 RNU11-2P-201ENST00000516898 142 ntBASIC2.56□□□□□ -2
USB1Q9BQ65 AC007318.2-201ENST00000620999 243 ntBASIC2.56□□□□□ -2
USB1Q9BQ65 AL137790.1-201ENST00000634283 177 ntBASIC2.56□□□□□ -2
USB1Q9BQ65 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
USB1Q9BQ65 RNU6-403P-201ENST00000363163 104 ntBASIC2.55□□□□□ -2
USB1Q9BQ65 SNORA80A-201ENST00000363922 136 ntBASIC2.55□□□□□ -2
USB1Q9BQ65 RNU6-649P-201ENST00000384463 107 ntBASIC2.55□□□□□ -2
USB1Q9BQ65 RNU6-587P-201ENST00000391282 106 ntBASIC2.55□□□□□ -2
USB1Q9BQ65 MIR18B-201ENST00000454574 71 ntBASIC2.55□□□□□ -2
USB1Q9BQ65 SNORA9.3-201ENST00000516383 129 ntBASIC2.55□□□□□ -2
USB1Q9BQ65 AP003716.2-201ENST00000528260 108 ntBASIC2.55□□□□□ -2
USB1Q9BQ65 YWHAEP2-201ENST00000580066 112 ntBASIC2.55□□□□□ -2
USB1Q9BQ65 YWHAEP3-201ENST00000582767 121 ntBASIC2.55□□□□□ -2
USB1Q9BQ65 VPS35-212ENST00000640313 141 ntTSL 5 BASIC2.55□□□□□ -2
USB1Q9BQ65 MIR101-2-201ENST00000362195 79 ntBASIC2.54□□□□□ -2
USB1Q9BQ65 RNA5SP276-201ENST00000362580 94 ntBASIC2.54□□□□□ -2
USB1Q9BQ65 RNU1-36P-201ENST00000365130 165 ntBASIC2.54□□□□□ -2
USB1Q9BQ65 SNORD100-201ENST00000408573 76 ntBASIC2.54□□□□□ -2
USB1Q9BQ65 MIR1185-1-201ENST00000408598 86 ntBASIC2.54□□□□□ -2
USB1Q9BQ65 RNA5SP82-201ENST00000516707 92 ntBASIC2.54□□□□□ -2
USB1Q9BQ65 AC015688.6-201ENST00000577737 104 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 286 ms